Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2297 and GFF2298 are separated by 49 nucleotides GFF2298 and GFF2299 are separated by 133 nucleotides GFF2299 and GFF2300 are separated by 275 nucleotides GFF2300 and GFF2301 are separated by 3 nucleotides GFF2301 and GFF2302 overlap by 4 nucleotides
GFF2297 - hypothetical protein, at 75,539 to 76,060
GFF2297
GFF2298 - hypothetical protein, at 76,110 to 76,334
GFF2298
GFF2299 - hypothetical protein, at 76,468 to 76,659
GFF2299
GFF2300 - putative glycosyltransferase, at 76,935 to 77,900
GFF2300
GFF2301 - hypothetical protein, at 77,904 to 78,614
GFF2301
GFF2302 - hypothetical protein, at 78,611 to 78,997
GFF2302
Position (kb) 76
77
78 Strain fitness (log2 ratio) -2
-1
0
1 at 76.123 kb on + strand at 76.123 kb on + strand at 76.124 kb on - strand at 76.316 kb on - strand at 76.316 kb on - strand at 76.373 kb on + strand at 76.373 kb on + strand at 76.373 kb on + strand at 76.414 kb on - strand at 76.498 kb on + strand, within GFF2299 at 76.547 kb on + strand, within GFF2299 at 76.643 kb on + strand at 76.644 kb on - strand at 76.644 kb on - strand at 76.655 kb on + strand at 76.656 kb on - strand at 76.656 kb on - strand at 76.656 kb on - strand at 76.917 kb on + strand at 76.918 kb on - strand at 76.919 kb on + strand at 77.547 kb on + strand, within GFF2300 at 77.662 kb on - strand, within GFF2300 at 77.751 kb on + strand, within GFF2300 at 77.762 kb on - strand, within GFF2300 at 77.812 kb on + strand at 77.824 kb on - strand at 77.824 kb on - strand at 77.838 kb on + strand at 77.838 kb on + strand at 77.838 kb on + strand at 77.838 kb on + strand at 77.838 kb on + strand at 77.838 kb on + strand at 77.838 kb on + strand at 77.839 kb on - strand at 77.839 kb on - strand at 77.839 kb on - strand at 77.839 kb on - strand at 77.840 kb on + strand at 77.883 kb on + strand at 77.883 kb on + strand at 77.940 kb on - strand at 77.955 kb on + strand at 77.955 kb on + strand at 77.955 kb on + strand at 77.956 kb on - strand at 77.956 kb on - strand at 77.956 kb on - strand at 77.956 kb on - strand at 77.956 kb on - strand at 77.956 kb on - strand at 77.956 kb on - strand at 77.956 kb on - strand at 77.959 kb on - strand at 77.959 kb on - strand at 78.191 kb on - strand, within GFF2301 at 78.243 kb on + strand, within GFF2301 at 78.243 kb on + strand, within GFF2301 at 78.244 kb on - strand, within GFF2301 at 78.244 kb on - strand, within GFF2301 at 78.345 kb on + strand, within GFF2301 at 78.345 kb on + strand, within GFF2301 at 78.408 kb on + strand, within GFF2301 at 78.409 kb on - strand, within GFF2301 at 78.411 kb on + strand, within GFF2301 at 78.411 kb on + strand, within GFF2301 at 78.412 kb on - strand, within GFF2301 at 78.412 kb on - strand, within GFF2301 at 78.783 kb on - strand, within GFF2302 at 78.783 kb on - strand, within GFF2302 at 78.783 kb on - strand, within GFF2302 at 78.871 kb on - strand, within GFF2302
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 76,123 + -0.2 76,123 + -0.9 76,124 - -0.6 76,316 - -1.2 76,316 - +0.0 76,373 + +0.4 76,373 + +0.5 76,373 + -0.4 76,414 - -0.4 76,498 + GFF2299 0.16 -0.4 76,547 + GFF2299 0.41 +1.0 76,643 + +0.1 76,644 - -0.8 76,644 - -0.0 76,655 + -0.5 76,656 - +0.8 76,656 - -0.6 76,656 - -0.4 76,917 + +1.0 76,918 - -0.7 76,919 + +0.4 77,547 + GFF2300 0.63 -0.2 77,662 - GFF2300 0.75 +0.3 77,751 + GFF2300 0.84 -0.6 77,762 - GFF2300 0.86 +0.3 77,812 + +0.2 77,824 - +0.1 77,824 - +0.6 77,838 + +0.7 77,838 + -0.7 77,838 + -0.7 77,838 + +0.3 77,838 + -1.3 77,838 + -0.7 77,838 + +0.1 77,839 - -1.2 77,839 - -0.5 77,839 - +0.9 77,839 - -0.4 77,840 + +0.4 77,883 + -0.3 77,883 + +0.0 77,940 - +0.1 77,955 + +0.1 77,955 + +0.8 77,955 + -2.2 77,956 - -0.0 77,956 - -0.2 77,956 - +0.4 77,956 - -0.2 77,956 - +1.2 77,956 - +0.5 77,956 - -0.2 77,956 - +1.4 77,959 - -0.7 77,959 - +0.0 78,191 - GFF2301 0.40 -0.9 78,243 + GFF2301 0.48 -0.1 78,243 + GFF2301 0.48 -0.1 78,244 - GFF2301 0.48 +0.3 78,244 - GFF2301 0.48 -0.1 78,345 + GFF2301 0.62 -0.5 78,345 + GFF2301 0.62 -0.5 78,408 + GFF2301 0.71 -0.8 78,409 - GFF2301 0.71 +0.2 78,411 + GFF2301 0.71 -0.1 78,411 + GFF2301 0.71 +0.1 78,412 - GFF2301 0.71 +1.1 78,412 - GFF2301 0.71 -0.6 78,783 - GFF2302 0.44 -0.4 78,783 - GFF2302 0.44 +0.1 78,783 - GFF2302 0.44 -0.1 78,871 - GFF2302 0.67 +1.1
Or see this region's nucleotide sequence