Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_13255 and ubiJ are separated by 122 nucleotides ubiJ and ubiB overlap by 4 nucleotides ubiB and OKGIIK_13270 are separated by 126 nucleotides OKGIIK_13270 and arfB are separated by 96 nucleotides
OKGIIK_13255: OKGIIK_13255 - tRNA (cytidine(34)-2'-O)-methyltransferase, at 2,861,237 to 2,861,704
_13255
OKGIIK_13260: ubiJ - sterol-binding protein, at 2,861,827 to 2,862,477
ubiJ
OKGIIK_13265: ubiB - ubiquinone biosynthesis regulatory protein kinase UbiB, at 2,862,474 to 2,864,123
ubiB
OKGIIK_13270: OKGIIK_13270 - pseudouridylate synthase, at 2,864,250 to 2,864,966
_13270
OKGIIK_13275: arfB - aminoacyl-tRNA hydrolase, at 2,865,063 to 2,865,485
arfB
Position (kb)
2862
2863
2864
2865 Strain fitness (log2 ratio)
-2
-1
0
1 at 2861.661 kb on - strand at 2861.661 kb on - strand at 2861.703 kb on - strand at 2861.749 kb on + strand at 2861.749 kb on + strand at 2861.750 kb on - strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.793 kb on + strand at 2861.815 kb on + strand at 2861.815 kb on + strand at 2861.815 kb on + strand at 2861.816 kb on - strand at 2864.149 kb on - strand at 2864.149 kb on - strand at 2864.149 kb on - strand at 2864.391 kb on + strand, within OKGIIK_13270 at 2864.391 kb on + strand, within OKGIIK_13270 at 2864.392 kb on - strand, within OKGIIK_13270 at 2864.505 kb on + strand, within OKGIIK_13270 at 2864.505 kb on + strand, within OKGIIK_13270 at 2864.505 kb on + strand, within OKGIIK_13270 at 2864.506 kb on - strand, within OKGIIK_13270 at 2864.506 kb on - strand, within OKGIIK_13270 at 2864.506 kb on - strand, within OKGIIK_13270 at 2864.506 kb on - strand, within OKGIIK_13270 at 2864.506 kb on - strand, within OKGIIK_13270 at 2864.506 kb on - strand, within OKGIIK_13270 at 2864.556 kb on + strand, within OKGIIK_13270 at 2864.557 kb on - strand, within OKGIIK_13270 at 2864.611 kb on - strand, within OKGIIK_13270 at 2864.793 kb on + strand, within OKGIIK_13270 at 2864.793 kb on + strand, within OKGIIK_13270 at 2864.793 kb on + strand, within OKGIIK_13270 at 2864.793 kb on + strand, within OKGIIK_13270 at 2864.794 kb on - strand, within OKGIIK_13270 at 2864.794 kb on - strand, within OKGIIK_13270 at 2864.794 kb on - strand, within OKGIIK_13270 at 2864.905 kb on - strand at 2865.050 kb on + strand at 2865.050 kb on + strand at 2865.050 kb on + strand at 2865.051 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,861,661 - +0.1 2,861,661 - +0.0 2,861,703 - +1.7 2,861,749 + -0.9 2,861,749 + +0.0 2,861,750 - -0.7 2,861,793 + -0.1 2,861,793 + -0.2 2,861,793 + -1.6 2,861,793 + +0.7 2,861,793 + -0.3 2,861,793 + +0.2 2,861,793 + -0.9 2,861,793 + +0.3 2,861,815 + -0.6 2,861,815 + +1.0 2,861,815 + -1.2 2,861,816 - -0.7 2,864,149 - -1.6 2,864,149 - -0.6 2,864,149 - +1.0 2,864,391 + OKGIIK_13270 0.20 -1.5 2,864,391 + OKGIIK_13270 0.20 -2.3 2,864,392 - OKGIIK_13270 0.20 +0.0 2,864,505 + OKGIIK_13270 0.36 -0.2 2,864,505 + OKGIIK_13270 0.36 +0.4 2,864,505 + OKGIIK_13270 0.36 +0.0 2,864,506 - OKGIIK_13270 0.36 +1.4 2,864,506 - OKGIIK_13270 0.36 -0.6 2,864,506 - OKGIIK_13270 0.36 -0.1 2,864,506 - OKGIIK_13270 0.36 -0.1 2,864,506 - OKGIIK_13270 0.36 +1.2 2,864,506 - OKGIIK_13270 0.36 -0.9 2,864,556 + OKGIIK_13270 0.43 +1.3 2,864,557 - OKGIIK_13270 0.43 -1.0 2,864,611 - OKGIIK_13270 0.50 -0.1 2,864,793 + OKGIIK_13270 0.76 +0.2 2,864,793 + OKGIIK_13270 0.76 -1.6 2,864,793 + OKGIIK_13270 0.76 -0.9 2,864,793 + OKGIIK_13270 0.76 +0.3 2,864,794 - OKGIIK_13270 0.76 -0.8 2,864,794 - OKGIIK_13270 0.76 -0.1 2,864,794 - OKGIIK_13270 0.76 -0.6 2,864,905 - -1.9 2,865,050 + +1.7 2,865,050 + -0.2 2,865,050 + -0.7 2,865,051 - -0.0
Or see this region's nucleotide sequence