Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_08690

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_08685 and OKGIIK_08690 overlap by 4 nucleotidesOKGIIK_08690 and OKGIIK_08695 overlap by 4 nucleotides OKGIIK_08685: OKGIIK_08685 - hypothetical protein, at 1,892,638 to 1,895,454 _08685 OKGIIK_08690: OKGIIK_08690 - hypothetical protein, at 1,895,451 to 1,896,194 _08690 OKGIIK_08695: OKGIIK_08695 - hypothetical protein, at 1,896,191 to 1,897,276 _08695 Position (kb) 1895 1896 1897Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1894.463 kb on + strand, within OKGIIK_08685at 1894.464 kb on - strand, within OKGIIK_08685at 1894.920 kb on - strand, within OKGIIK_08685at 1894.920 kb on - strand, within OKGIIK_08685at 1894.920 kb on - strand, within OKGIIK_08685at 1894.925 kb on + strand, within OKGIIK_08685at 1894.925 kb on + strand, within OKGIIK_08685at 1894.925 kb on + strand, within OKGIIK_08685at 1894.926 kb on - strand, within OKGIIK_08685at 1894.926 kb on - strand, within OKGIIK_08685at 1894.926 kb on - strand, within OKGIIK_08685at 1894.926 kb on - strand, within OKGIIK_08685at 1894.926 kb on - strand, within OKGIIK_08685at 1894.926 kb on - strand, within OKGIIK_08685at 1895.049 kb on - strand, within OKGIIK_08685at 1895.063 kb on + strand, within OKGIIK_08685at 1895.063 kb on + strand, within OKGIIK_08685at 1895.063 kb on + strand, within OKGIIK_08685at 1895.063 kb on + strand, within OKGIIK_08685at 1895.064 kb on - strand, within OKGIIK_08685at 1895.064 kb on - strand, within OKGIIK_08685at 1895.064 kb on - strand, within OKGIIK_08685at 1895.064 kb on - strand, within OKGIIK_08685at 1895.064 kb on - strand, within OKGIIK_08685at 1895.282 kb on + strandat 1895.282 kb on + strandat 1895.283 kb on - strandat 1895.423 kb on + strandat 1895.423 kb on + strandat 1895.423 kb on + strandat 1895.423 kb on + strandat 1895.424 kb on - strandat 1895.424 kb on - strandat 1895.424 kb on - strandat 1895.424 kb on - strandat 1895.424 kb on - strandat 1895.424 kb on - strandat 1895.424 kb on - strandat 1895.454 kb on + strandat 1895.454 kb on + strandat 1895.454 kb on + strandat 1895.454 kb on + strandat 1895.454 kb on + strandat 1895.454 kb on + strandat 1895.454 kb on + strandat 1895.454 kb on + strandat 1895.454 kb on + strandat 1895.454 kb on + strandat 1895.455 kb on - strandat 1895.455 kb on - strandat 1895.455 kb on - strandat 1895.455 kb on - strandat 1895.455 kb on - strandat 1895.455 kb on - strandat 1895.461 kb on + strandat 1895.462 kb on - strandat 1895.462 kb on - strandat 1895.462 kb on - strandat 1895.483 kb on - strandat 1895.639 kb on - strand, within OKGIIK_08690at 1895.639 kb on - strand, within OKGIIK_08690at 1895.639 kb on - strand, within OKGIIK_08690at 1895.653 kb on + strand, within OKGIIK_08690at 1895.653 kb on + strand, within OKGIIK_08690at 1895.653 kb on + strand, within OKGIIK_08690at 1895.653 kb on + strand, within OKGIIK_08690at 1895.654 kb on - strand, within OKGIIK_08690at 1895.732 kb on + strand, within OKGIIK_08690at 1895.732 kb on + strand, within OKGIIK_08690at 1895.732 kb on + strand, within OKGIIK_08690at 1895.732 kb on + strand, within OKGIIK_08690at 1895.732 kb on + strand, within OKGIIK_08690at 1895.732 kb on + strand, within OKGIIK_08690at 1895.733 kb on - strand, within OKGIIK_08690at 1895.733 kb on - strand, within OKGIIK_08690at 1895.733 kb on - strand, within OKGIIK_08690at 1895.737 kb on + strand, within OKGIIK_08690at 1895.738 kb on - strand, within OKGIIK_08690at 1895.785 kb on + strand, within OKGIIK_08690at 1895.785 kb on + strand, within OKGIIK_08690at 1895.785 kb on + strand, within OKGIIK_08690at 1895.785 kb on + strand, within OKGIIK_08690at 1895.785 kb on + strand, within OKGIIK_08690at 1895.785 kb on + strand, within OKGIIK_08690at 1895.786 kb on - strand, within OKGIIK_08690at 1895.786 kb on - strand, within OKGIIK_08690at 1895.786 kb on - strand, within OKGIIK_08690at 1895.786 kb on - strand, within OKGIIK_08690at 1895.786 kb on - strand, within OKGIIK_08690at 1895.786 kb on - strand, within OKGIIK_08690at 1895.786 kb on - strand, within OKGIIK_08690at 1895.786 kb on - strand, within OKGIIK_08690at 1895.786 kb on - strand, within OKGIIK_08690at 1895.786 kb on - strand, within OKGIIK_08690at 1895.786 kb on - strand, within OKGIIK_08690at 1895.827 kb on + strand, within OKGIIK_08690at 1895.866 kb on + strand, within OKGIIK_08690at 1895.866 kb on + strand, within OKGIIK_08690at 1895.866 kb on + strand, within OKGIIK_08690at 1895.867 kb on - strand, within OKGIIK_08690at 1895.867 kb on - strand, within OKGIIK_08690at 1895.867 kb on - strand, within OKGIIK_08690at 1895.867 kb on - strand, within OKGIIK_08690at 1896.095 kb on - strand, within OKGIIK_08690at 1896.095 kb on - strand, within OKGIIK_08690at 1896.095 kb on - strand, within OKGIIK_08690at 1896.112 kb on + strand, within OKGIIK_08690at 1896.112 kb on + strand, within OKGIIK_08690at 1896.113 kb on - strand, within OKGIIK_08690at 1896.225 kb on + strandat 1896.225 kb on + strandat 1896.225 kb on + strandat 1896.225 kb on + strandat 1896.225 kb on + strandat 1896.226 kb on - strandat 1896.226 kb on - strandat 1896.226 kb on - strandat 1896.226 kb on - strandat 1896.231 kb on + strandat 1896.231 kb on + strandat 1896.231 kb on + strandat 1896.231 kb on + strandat 1896.231 kb on + strandat 1896.231 kb on + strandat 1896.231 kb on + strandat 1896.232 kb on - strandat 1896.232 kb on - strandat 1896.232 kb on - strandat 1896.232 kb on - strandat 1896.232 kb on - strandat 1896.261 kb on + strandat 1896.261 kb on + strandat 1896.262 kb on - strandat 1896.262 kb on - strandat 1896.324 kb on + strand, within OKGIIK_08695at 1896.324 kb on + strand, within OKGIIK_08695at 1896.324 kb on + strand, within OKGIIK_08695at 1896.324 kb on + strand, within OKGIIK_08695at 1896.324 kb on + strand, within OKGIIK_08695at 1896.325 kb on - strand, within OKGIIK_08695at 1896.325 kb on - strand, within OKGIIK_08695at 1896.348 kb on + strand, within OKGIIK_08695at 1896.399 kb on - strand, within OKGIIK_08695at 1896.561 kb on + strand, within OKGIIK_08695at 1896.561 kb on + strand, within OKGIIK_08695at 1896.561 kb on + strand, within OKGIIK_08695at 1896.562 kb on - strand, within OKGIIK_08695at 1896.562 kb on - strand, within OKGIIK_08695at 1896.562 kb on - strand, within OKGIIK_08695at 1896.562 kb on - strand, within OKGIIK_08695at 1896.562 kb on - strand, within OKGIIK_08695at 1896.562 kb on - strand, within OKGIIK_08695at 1896.562 kb on - strand, within OKGIIK_08695at 1896.562 kb on - strand, within OKGIIK_08695at 1896.671 kb on - strand, within OKGIIK_08695at 1896.671 kb on - strand, within OKGIIK_08695at 1896.720 kb on + strand, within OKGIIK_08695at 1896.720 kb on + strand, within OKGIIK_08695at 1896.721 kb on - strand, within OKGIIK_08695at 1896.721 kb on - strand, within OKGIIK_08695at 1896.721 kb on - strand, within OKGIIK_08695at 1896.777 kb on + strand, within OKGIIK_08695at 1896.777 kb on + strand, within OKGIIK_08695at 1896.777 kb on + strand, within OKGIIK_08695at 1896.777 kb on + strand, within OKGIIK_08695at 1896.777 kb on + strand, within OKGIIK_08695at 1896.777 kb on + strand, within OKGIIK_08695at 1896.778 kb on - strand, within OKGIIK_08695at 1896.778 kb on - strand, within OKGIIK_08695at 1896.778 kb on - strand, within OKGIIK_08695at 1896.778 kb on - strand, within OKGIIK_08695at 1896.778 kb on - strand, within OKGIIK_08695at 1896.778 kb on - strand, within OKGIIK_08695at 1896.778 kb on - strand, within OKGIIK_08695at 1896.778 kb on - strand, within OKGIIK_08695at 1896.778 kb on - strand, within OKGIIK_08695at 1896.787 kb on - strand, within OKGIIK_08695at 1896.818 kb on + strand, within OKGIIK_08695at 1896.819 kb on - strand, within OKGIIK_08695at 1896.819 kb on - strand, within OKGIIK_08695at 1896.841 kb on + strand, within OKGIIK_08695at 1896.928 kb on - strand, within OKGIIK_08695at 1896.933 kb on + strand, within OKGIIK_08695at 1896.933 kb on + strand, within OKGIIK_08695at 1896.933 kb on + strand, within OKGIIK_08695at 1896.933 kb on + strand, within OKGIIK_08695at 1896.933 kb on + strand, within OKGIIK_08695at 1896.933 kb on + strand, within OKGIIK_08695at 1896.934 kb on - strand, within OKGIIK_08695at 1896.934 kb on - strand, within OKGIIK_08695at 1896.934 kb on - strand, within OKGIIK_08695at 1897.032 kb on + strand, within OKGIIK_08695at 1897.032 kb on + strand, within OKGIIK_08695at 1897.032 kb on + strand, within OKGIIK_08695at 1897.032 kb on + strand, within OKGIIK_08695at 1897.032 kb on + strand, within OKGIIK_08695at 1897.032 kb on + strand, within OKGIIK_08695at 1897.032 kb on + strand, within OKGIIK_08695at 1897.032 kb on + strand, within OKGIIK_08695at 1897.033 kb on - strand, within OKGIIK_08695at 1897.033 kb on - strand, within OKGIIK_08695at 1897.033 kb on - strand, within OKGIIK_08695at 1897.065 kb on + strand, within OKGIIK_08695at 1897.065 kb on + strand, within OKGIIK_08695at 1897.065 kb on + strand, within OKGIIK_08695at 1897.065 kb on + strand, within OKGIIK_08695at 1897.092 kb on + strand, within OKGIIK_08695at 1897.101 kb on + strand, within OKGIIK_08695at 1897.102 kb on - strand, within OKGIIK_08695

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,894,463 + OKGIIK_08685 0.65 +0.6
1,894,464 - OKGIIK_08685 0.65 -0.7
1,894,920 - OKGIIK_08685 0.81 +0.9
1,894,920 - OKGIIK_08685 0.81 -0.7
1,894,920 - OKGIIK_08685 0.81 -0.4
1,894,925 + OKGIIK_08685 0.81 +0.1
1,894,925 + OKGIIK_08685 0.81 -0.8
1,894,925 + OKGIIK_08685 0.81 +0.8
1,894,926 - OKGIIK_08685 0.81 +0.6
1,894,926 - OKGIIK_08685 0.81 -1.4
1,894,926 - OKGIIK_08685 0.81 -0.4
1,894,926 - OKGIIK_08685 0.81 -0.4
1,894,926 - OKGIIK_08685 0.81 +1.2
1,894,926 - OKGIIK_08685 0.81 +0.6
1,895,049 - OKGIIK_08685 0.86 -0.4
1,895,063 + OKGIIK_08685 0.86 +0.6
1,895,063 + OKGIIK_08685 0.86 -0.9
1,895,063 + OKGIIK_08685 0.86 -1.4
1,895,063 + OKGIIK_08685 0.86 -0.4
1,895,064 - OKGIIK_08685 0.86 +0.8
1,895,064 - OKGIIK_08685 0.86 +0.2
1,895,064 - OKGIIK_08685 0.86 -1.4
1,895,064 - OKGIIK_08685 0.86 -0.7
1,895,064 - OKGIIK_08685 0.86 -1.2
1,895,282 + +1.9
1,895,282 + +0.3
1,895,283 - -1.4
1,895,423 + +0.1
1,895,423 + -0.3
1,895,423 + -0.2
1,895,423 + -0.7
1,895,424 - +0.5
1,895,424 - -1.2
1,895,424 - +0.6
1,895,424 - -0.5
1,895,424 - -1.8
1,895,424 - -1.5
1,895,424 - +0.3
1,895,454 + +1.2
1,895,454 + -0.7
1,895,454 + -0.3
1,895,454 + -0.4
1,895,454 + +1.0
1,895,454 + +0.3
1,895,454 + -1.5
1,895,454 + -0.5
1,895,454 + +1.6
1,895,454 + -1.6
1,895,455 - +0.4
1,895,455 - +0.3
1,895,455 - +0.4
1,895,455 - -1.4
1,895,455 - -0.4
1,895,455 - -0.4
1,895,461 + -0.4
1,895,462 - +0.1
1,895,462 - -1.8
1,895,462 - -0.4
1,895,483 - +1.2
1,895,639 - OKGIIK_08690 0.25 +0.9
1,895,639 - OKGIIK_08690 0.25 +0.6
1,895,639 - OKGIIK_08690 0.25 -0.5
1,895,653 + OKGIIK_08690 0.27 +0.2
1,895,653 + OKGIIK_08690 0.27 -1.8
1,895,653 + OKGIIK_08690 0.27 -1.7
1,895,653 + OKGIIK_08690 0.27 +0.3
1,895,654 - OKGIIK_08690 0.27 -1.2
1,895,732 + OKGIIK_08690 0.38 -1.2
1,895,732 + OKGIIK_08690 0.38 +0.7
1,895,732 + OKGIIK_08690 0.38 -0.1
1,895,732 + OKGIIK_08690 0.38 -1.4
1,895,732 + OKGIIK_08690 0.38 +0.1
1,895,732 + OKGIIK_08690 0.38 -1.4
1,895,733 - OKGIIK_08690 0.38 -0.2
1,895,733 - OKGIIK_08690 0.38 -2.1
1,895,733 - OKGIIK_08690 0.38 -0.5
1,895,737 + OKGIIK_08690 0.38 -2.1
1,895,738 - OKGIIK_08690 0.39 +0.8
1,895,785 + OKGIIK_08690 0.45 -0.4
1,895,785 + OKGIIK_08690 0.45 -1.8
1,895,785 + OKGIIK_08690 0.45 +0.1
1,895,785 + OKGIIK_08690 0.45 -0.1
1,895,785 + OKGIIK_08690 0.45 +0.2
1,895,785 + OKGIIK_08690 0.45 -0.4
1,895,786 - OKGIIK_08690 0.45 +0.2
1,895,786 - OKGIIK_08690 0.45 -0.7
1,895,786 - OKGIIK_08690 0.45 +0.6
1,895,786 - OKGIIK_08690 0.45 -0.8
1,895,786 - OKGIIK_08690 0.45 +0.2
1,895,786 - OKGIIK_08690 0.45 +0.6
1,895,786 - OKGIIK_08690 0.45 -0.2
1,895,786 - OKGIIK_08690 0.45 -0.2
1,895,786 - OKGIIK_08690 0.45 +0.3
1,895,786 - OKGIIK_08690 0.45 +0.1
1,895,786 - OKGIIK_08690 0.45 -0.9
1,895,827 + OKGIIK_08690 0.51 -1.2
1,895,866 + OKGIIK_08690 0.56 +1.4
1,895,866 + OKGIIK_08690 0.56 +0.6
1,895,866 + OKGIIK_08690 0.56 +1.6
1,895,867 - OKGIIK_08690 0.56 -3.1
1,895,867 - OKGIIK_08690 0.56 -0.8
1,895,867 - OKGIIK_08690 0.56 +0.4
1,895,867 - OKGIIK_08690 0.56 -0.9
1,896,095 - OKGIIK_08690 0.87 +0.1
1,896,095 - OKGIIK_08690 0.87 -0.3
1,896,095 - OKGIIK_08690 0.87 +0.1
1,896,112 + OKGIIK_08690 0.89 +0.1
1,896,112 + OKGIIK_08690 0.89 +0.3
1,896,113 - OKGIIK_08690 0.89 -3.2
1,896,225 + -0.0
1,896,225 + +1.4
1,896,225 + -0.3
1,896,225 + +1.1
1,896,225 + -0.2
1,896,226 - -0.3
1,896,226 - -2.2
1,896,226 - -1.7
1,896,226 - -1.5
1,896,231 + -0.9
1,896,231 + -0.9
1,896,231 + +0.2
1,896,231 + +0.6
1,896,231 + +0.9
1,896,231 + -0.9
1,896,231 + -1.2
1,896,232 - +1.4
1,896,232 - +0.4
1,896,232 - -1.9
1,896,232 - +1.2
1,896,232 - -0.2
1,896,261 + -2.1
1,896,261 + -0.7
1,896,262 - -1.1
1,896,262 - -1.1
1,896,324 + OKGIIK_08695 0.12 -2.7
1,896,324 + OKGIIK_08695 0.12 -1.4
1,896,324 + OKGIIK_08695 0.12 +2.2
1,896,324 + OKGIIK_08695 0.12 -1.7
1,896,324 + OKGIIK_08695 0.12 +0.0
1,896,325 - OKGIIK_08695 0.12 +1.2
1,896,325 - OKGIIK_08695 0.12 -2.3
1,896,348 + OKGIIK_08695 0.14 +0.9
1,896,399 - OKGIIK_08695 0.19 +0.4
1,896,561 + OKGIIK_08695 0.34 +0.1
1,896,561 + OKGIIK_08695 0.34 +0.1
1,896,561 + OKGIIK_08695 0.34 -0.4
1,896,562 - OKGIIK_08695 0.34 +1.2
1,896,562 - OKGIIK_08695 0.34 -0.4
1,896,562 - OKGIIK_08695 0.34 +1.1
1,896,562 - OKGIIK_08695 0.34 +0.1
1,896,562 - OKGIIK_08695 0.34 +0.3
1,896,562 - OKGIIK_08695 0.34 -0.9
1,896,562 - OKGIIK_08695 0.34 -0.2
1,896,562 - OKGIIK_08695 0.34 -0.1
1,896,671 - OKGIIK_08695 0.44 -2.5
1,896,671 - OKGIIK_08695 0.44 -0.4
1,896,720 + OKGIIK_08695 0.49 -0.9
1,896,720 + OKGIIK_08695 0.49 -0.8
1,896,721 - OKGIIK_08695 0.49 +0.3
1,896,721 - OKGIIK_08695 0.49 +0.5
1,896,721 - OKGIIK_08695 0.49 -1.4
1,896,777 + OKGIIK_08695 0.54 -0.2
1,896,777 + OKGIIK_08695 0.54 +0.6
1,896,777 + OKGIIK_08695 0.54 +0.5
1,896,777 + OKGIIK_08695 0.54 -0.8
1,896,777 + OKGIIK_08695 0.54 -1.7
1,896,777 + OKGIIK_08695 0.54 +0.2
1,896,778 - OKGIIK_08695 0.54 +0.4
1,896,778 - OKGIIK_08695 0.54 +0.6
1,896,778 - OKGIIK_08695 0.54 +1.9
1,896,778 - OKGIIK_08695 0.54 -0.2
1,896,778 - OKGIIK_08695 0.54 -0.4
1,896,778 - OKGIIK_08695 0.54 +0.3
1,896,778 - OKGIIK_08695 0.54 -0.2
1,896,778 - OKGIIK_08695 0.54 -0.4
1,896,778 - OKGIIK_08695 0.54 +1.8
1,896,787 - OKGIIK_08695 0.55 -0.4
1,896,818 + OKGIIK_08695 0.58 -0.6
1,896,819 - OKGIIK_08695 0.58 -1.1
1,896,819 - OKGIIK_08695 0.58 -0.7
1,896,841 + OKGIIK_08695 0.60 -2.3
1,896,928 - OKGIIK_08695 0.68 -1.4
1,896,933 + OKGIIK_08695 0.68 +0.3
1,896,933 + OKGIIK_08695 0.68 -1.2
1,896,933 + OKGIIK_08695 0.68 -0.0
1,896,933 + OKGIIK_08695 0.68 -1.9
1,896,933 + OKGIIK_08695 0.68 -0.9
1,896,933 + OKGIIK_08695 0.68 -2.3
1,896,934 - OKGIIK_08695 0.68 +0.3
1,896,934 - OKGIIK_08695 0.68 +0.5
1,896,934 - OKGIIK_08695 0.68 -1.2
1,897,032 + OKGIIK_08695 0.77 +1.0
1,897,032 + OKGIIK_08695 0.77 -0.8
1,897,032 + OKGIIK_08695 0.77 -0.4
1,897,032 + OKGIIK_08695 0.77 +0.3
1,897,032 + OKGIIK_08695 0.77 -0.4
1,897,032 + OKGIIK_08695 0.77 -0.1
1,897,032 + OKGIIK_08695 0.77 -0.9
1,897,032 + OKGIIK_08695 0.77 -0.2
1,897,033 - OKGIIK_08695 0.78 +0.4
1,897,033 - OKGIIK_08695 0.78 -0.6
1,897,033 - OKGIIK_08695 0.78 +1.0
1,897,065 + OKGIIK_08695 0.80 -0.7
1,897,065 + OKGIIK_08695 0.80 -0.4
1,897,065 + OKGIIK_08695 0.80 -1.2
1,897,065 + OKGIIK_08695 0.80 -0.3
1,897,092 + OKGIIK_08695 0.83 -0.3
1,897,101 + OKGIIK_08695 0.84 +0.8
1,897,102 - OKGIIK_08695 0.84 -0.7

Or see this region's nucleotide sequence