Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rnc and OKGIIK_07875 are separated by 1 nucleotides OKGIIK_07875 and lepB are separated by 176 nucleotides lepB and OKGIIK_07885 are separated by 99 nucleotides
OKGIIK_07870: rnc - ribonuclease III, at 1,741,861 to 1,742,523
rnc
OKGIIK_07875: OKGIIK_07875 - DUF4845 domain-containing protein, at 1,742,525 to 1,742,908
_07875
OKGIIK_07880: lepB - signal peptidase I, at 1,743,085 to 1,743,981
lepB
OKGIIK_07885: OKGIIK_07885 - Elongation factor 4, at 1,744,081 to 1,745,871
_07885
Position (kb)
1743
1744 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1742.181 kb on - strand, within rnc at 1742.181 kb on - strand, within rnc at 1742.381 kb on + strand, within rnc at 1742.382 kb on - strand, within rnc at 1742.508 kb on - strand at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.589 kb on + strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.590 kb on - strand, within OKGIIK_07875 at 1742.613 kb on + strand, within OKGIIK_07875 at 1742.613 kb on + strand, within OKGIIK_07875 at 1742.613 kb on + strand, within OKGIIK_07875 at 1742.614 kb on - strand, within OKGIIK_07875 at 1742.614 kb on - strand, within OKGIIK_07875 at 1742.614 kb on - strand, within OKGIIK_07875 at 1742.694 kb on + strand, within OKGIIK_07875 at 1742.694 kb on + strand, within OKGIIK_07875 at 1742.694 kb on + strand, within OKGIIK_07875 at 1742.694 kb on + strand, within OKGIIK_07875 at 1742.695 kb on - strand, within OKGIIK_07875 at 1742.695 kb on - strand, within OKGIIK_07875 at 1742.695 kb on - strand, within OKGIIK_07875 at 1742.695 kb on - strand, within OKGIIK_07875 at 1742.695 kb on - strand, within OKGIIK_07875 at 1742.695 kb on - strand, within OKGIIK_07875 at 1742.695 kb on - strand, within OKGIIK_07875 at 1742.695 kb on - strand, within OKGIIK_07875 at 1742.799 kb on + strand, within OKGIIK_07875 at 1742.799 kb on + strand, within OKGIIK_07875 at 1742.799 kb on + strand, within OKGIIK_07875 at 1742.799 kb on + strand, within OKGIIK_07875 at 1742.799 kb on + strand, within OKGIIK_07875 at 1742.799 kb on + strand, within OKGIIK_07875 at 1742.799 kb on + strand, within OKGIIK_07875 at 1742.799 kb on + strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.800 kb on - strand, within OKGIIK_07875 at 1742.808 kb on + strand, within OKGIIK_07875 at 1742.808 kb on + strand, within OKGIIK_07875 at 1742.809 kb on - strand, within OKGIIK_07875 at 1742.809 kb on - strand, within OKGIIK_07875 at 1742.809 kb on - strand, within OKGIIK_07875 at 1742.835 kb on + strand, within OKGIIK_07875 at 1742.835 kb on + strand, within OKGIIK_07875 at 1742.835 kb on + strand, within OKGIIK_07875 at 1742.835 kb on + strand, within OKGIIK_07875 at 1742.835 kb on + strand, within OKGIIK_07875 at 1742.835 kb on + strand, within OKGIIK_07875 at 1742.835 kb on + strand, within OKGIIK_07875 at 1742.836 kb on - strand, within OKGIIK_07875 at 1742.836 kb on - strand, within OKGIIK_07875 at 1742.836 kb on - strand, within OKGIIK_07875 at 1742.836 kb on - strand, within OKGIIK_07875 at 1742.836 kb on - strand, within OKGIIK_07875 at 1742.836 kb on - strand, within OKGIIK_07875 at 1742.836 kb on - strand, within OKGIIK_07875 at 1742.836 kb on - strand, within OKGIIK_07875 at 1742.836 kb on - strand, within OKGIIK_07875 at 1742.836 kb on - strand, within OKGIIK_07875 at 1742.908 kb on + strand at 1742.908 kb on + strand at 1742.909 kb on - strand at 1742.909 kb on - strand at 1742.909 kb on - strand at 1742.909 kb on - strand at 1742.939 kb on + strand at 1742.939 kb on + strand at 1742.939 kb on + strand at 1742.940 kb on - strand at 1742.940 kb on - strand at 1742.940 kb on - strand at 1742.940 kb on - strand at 1742.940 kb on - strand at 1742.940 kb on - strand at 1742.940 kb on - strand at 1742.940 kb on - strand at 1742.940 kb on - strand at 1742.940 kb on - strand at 1742.940 kb on - strand at 1742.995 kb on + strand at 1742.995 kb on + strand at 1742.995 kb on + strand at 1742.996 kb on - strand at 1742.996 kb on - strand at 1742.996 kb on - strand at 1742.996 kb on - strand at 1742.996 kb on - strand at 1744.083 kb on - strand at 1744.083 kb on - strand at 1744.083 kb on - strand at 1744.083 kb on - strand at 1744.083 kb on - strand at 1744.083 kb on - strand at 1744.083 kb on - strand at 1744.083 kb on - strand at 1744.083 kb on - strand at 1744.100 kb on - strand at 1744.463 kb on + strand, within OKGIIK_07885 at 1744.479 kb on - strand, within OKGIIK_07885 at 1744.544 kb on + strand, within OKGIIK_07885 at 1744.544 kb on + strand, within OKGIIK_07885 at 1744.545 kb on - strand, within OKGIIK_07885 at 1744.545 kb on - strand, within OKGIIK_07885 at 1744.545 kb on - strand, within OKGIIK_07885 at 1744.571 kb on + strand, within OKGIIK_07885 at 1744.572 kb on - strand, within OKGIIK_07885 at 1744.631 kb on + strand, within OKGIIK_07885 at 1744.631 kb on + strand, within OKGIIK_07885 at 1744.632 kb on - strand, within OKGIIK_07885 at 1744.632 kb on - strand, within OKGIIK_07885 at 1744.757 kb on + strand, within OKGIIK_07885 at 1744.758 kb on - strand, within OKGIIK_07885
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,742,181 - rnc OKGIIK_07870 0.48 +0.1 1,742,181 - rnc OKGIIK_07870 0.48 -3.4 1,742,381 + rnc OKGIIK_07870 0.78 -0.3 1,742,382 - rnc OKGIIK_07870 0.79 -0.6 1,742,508 - -0.6 1,742,589 + OKGIIK_07875 0.17 +1.1 1,742,589 + OKGIIK_07875 0.17 +0.3 1,742,589 + OKGIIK_07875 0.17 -0.1 1,742,589 + OKGIIK_07875 0.17 -0.9 1,742,589 + OKGIIK_07875 0.17 -1.6 1,742,589 + OKGIIK_07875 0.17 +0.3 1,742,589 + OKGIIK_07875 0.17 -1.1 1,742,589 + OKGIIK_07875 0.17 -1.6 1,742,589 + OKGIIK_07875 0.17 +1.4 1,742,589 + OKGIIK_07875 0.17 -1.8 1,742,589 + OKGIIK_07875 0.17 -0.9 1,742,589 + OKGIIK_07875 0.17 -0.9 1,742,589 + OKGIIK_07875 0.17 +1.7 1,742,589 + OKGIIK_07875 0.17 -0.3 1,742,589 + OKGIIK_07875 0.17 -0.5 1,742,589 + OKGIIK_07875 0.17 +0.2 1,742,589 + OKGIIK_07875 0.17 -0.3 1,742,589 + OKGIIK_07875 0.17 -2.3 1,742,589 + OKGIIK_07875 0.17 -1.9 1,742,589 + OKGIIK_07875 0.17 -0.9 1,742,589 + OKGIIK_07875 0.17 +1.4 1,742,590 - OKGIIK_07875 0.17 -0.3 1,742,590 - OKGIIK_07875 0.17 -0.2 1,742,590 - OKGIIK_07875 0.17 -0.2 1,742,590 - OKGIIK_07875 0.17 -0.1 1,742,590 - OKGIIK_07875 0.17 +0.1 1,742,590 - OKGIIK_07875 0.17 -1.0 1,742,590 - OKGIIK_07875 0.17 -1.1 1,742,590 - OKGIIK_07875 0.17 -0.2 1,742,590 - OKGIIK_07875 0.17 -1.8 1,742,590 - OKGIIK_07875 0.17 -1.2 1,742,590 - OKGIIK_07875 0.17 +0.5 1,742,590 - OKGIIK_07875 0.17 +1.1 1,742,590 - OKGIIK_07875 0.17 +0.5 1,742,590 - OKGIIK_07875 0.17 -0.7 1,742,590 - OKGIIK_07875 0.17 -0.3 1,742,590 - OKGIIK_07875 0.17 -0.8 1,742,590 - OKGIIK_07875 0.17 +1.3 1,742,590 - OKGIIK_07875 0.17 +0.0 1,742,590 - OKGIIK_07875 0.17 -1.6 1,742,590 - OKGIIK_07875 0.17 -0.3 1,742,590 - OKGIIK_07875 0.17 +0.3 1,742,613 + OKGIIK_07875 0.23 +0.4 1,742,613 + OKGIIK_07875 0.23 -1.5 1,742,613 + OKGIIK_07875 0.23 +0.7 1,742,614 - OKGIIK_07875 0.23 -1.8 1,742,614 - OKGIIK_07875 0.23 -1.0 1,742,614 - OKGIIK_07875 0.23 +0.8 1,742,694 + OKGIIK_07875 0.44 +0.3 1,742,694 + OKGIIK_07875 0.44 +0.1 1,742,694 + OKGIIK_07875 0.44 +0.8 1,742,694 + OKGIIK_07875 0.44 +0.7 1,742,695 - OKGIIK_07875 0.44 -1.5 1,742,695 - OKGIIK_07875 0.44 +0.7 1,742,695 - OKGIIK_07875 0.44 -1.0 1,742,695 - OKGIIK_07875 0.44 +0.7 1,742,695 - OKGIIK_07875 0.44 -0.9 1,742,695 - OKGIIK_07875 0.44 -1.7 1,742,695 - OKGIIK_07875 0.44 +0.9 1,742,695 - OKGIIK_07875 0.44 +1.0 1,742,799 + OKGIIK_07875 0.71 -2.2 1,742,799 + OKGIIK_07875 0.71 -2.2 1,742,799 + OKGIIK_07875 0.71 +0.5 1,742,799 + OKGIIK_07875 0.71 -0.6 1,742,799 + OKGIIK_07875 0.71 -1.3 1,742,799 + OKGIIK_07875 0.71 -0.4 1,742,799 + OKGIIK_07875 0.71 -2.1 1,742,799 + OKGIIK_07875 0.71 +0.4 1,742,800 - OKGIIK_07875 0.72 +0.9 1,742,800 - OKGIIK_07875 0.72 +0.2 1,742,800 - OKGIIK_07875 0.72 +0.3 1,742,800 - OKGIIK_07875 0.72 +0.7 1,742,800 - OKGIIK_07875 0.72 -3.0 1,742,800 - OKGIIK_07875 0.72 -0.6 1,742,800 - OKGIIK_07875 0.72 +1.4 1,742,800 - OKGIIK_07875 0.72 +1.3 1,742,800 - OKGIIK_07875 0.72 +1.1 1,742,800 - OKGIIK_07875 0.72 +1.3 1,742,800 - OKGIIK_07875 0.72 -0.3 1,742,800 - OKGIIK_07875 0.72 -0.0 1,742,800 - OKGIIK_07875 0.72 -0.1 1,742,800 - OKGIIK_07875 0.72 +1.3 1,742,808 + OKGIIK_07875 0.74 -0.0 1,742,808 + OKGIIK_07875 0.74 -0.5 1,742,809 - OKGIIK_07875 0.74 +0.4 1,742,809 - OKGIIK_07875 0.74 +1.3 1,742,809 - OKGIIK_07875 0.74 +1.8 1,742,835 + OKGIIK_07875 0.81 -0.3 1,742,835 + OKGIIK_07875 0.81 +0.5 1,742,835 + OKGIIK_07875 0.81 -3.1 1,742,835 + OKGIIK_07875 0.81 -1.0 1,742,835 + OKGIIK_07875 0.81 -0.3 1,742,835 + OKGIIK_07875 0.81 -1.6 1,742,835 + OKGIIK_07875 0.81 -0.6 1,742,836 - OKGIIK_07875 0.81 -0.2 1,742,836 - OKGIIK_07875 0.81 +0.1 1,742,836 - OKGIIK_07875 0.81 -0.8 1,742,836 - OKGIIK_07875 0.81 +0.1 1,742,836 - OKGIIK_07875 0.81 -3.0 1,742,836 - OKGIIK_07875 0.81 +0.1 1,742,836 - OKGIIK_07875 0.81 -0.3 1,742,836 - OKGIIK_07875 0.81 -1.0 1,742,836 - OKGIIK_07875 0.81 -0.7 1,742,836 - OKGIIK_07875 0.81 -0.9 1,742,908 + -0.3 1,742,908 + -1.1 1,742,909 - +0.5 1,742,909 - +0.4 1,742,909 - -0.5 1,742,909 - -0.9 1,742,939 + -0.8 1,742,939 + -0.2 1,742,939 + -0.0 1,742,940 - -0.0 1,742,940 - -0.3 1,742,940 - +0.7 1,742,940 - -1.2 1,742,940 - +1.0 1,742,940 - -0.8 1,742,940 - -0.6 1,742,940 - -0.5 1,742,940 - -1.7 1,742,940 - -0.9 1,742,940 - -1.6 1,742,995 + +0.3 1,742,995 + -0.6 1,742,995 + -3.7 1,742,996 - +0.8 1,742,996 - -0.6 1,742,996 - -1.3 1,742,996 - +0.4 1,742,996 - -0.3 1,744,083 - -1.2 1,744,083 - -0.3 1,744,083 - -2.9 1,744,083 - -0.6 1,744,083 - -1.3 1,744,083 - -1.9 1,744,083 - -0.5 1,744,083 - +0.1 1,744,083 - -1.3 1,744,100 - +1.0 1,744,463 + OKGIIK_07885 0.21 +0.5 1,744,479 - OKGIIK_07885 0.22 -2.0 1,744,544 + OKGIIK_07885 0.26 +1.0 1,744,544 + OKGIIK_07885 0.26 +0.2 1,744,545 - OKGIIK_07885 0.26 +0.4 1,744,545 - OKGIIK_07885 0.26 -0.6 1,744,545 - OKGIIK_07885 0.26 +0.1 1,744,571 + OKGIIK_07885 0.27 -1.6 1,744,572 - OKGIIK_07885 0.27 -2.3 1,744,631 + OKGIIK_07885 0.31 -1.1 1,744,631 + OKGIIK_07885 0.31 -2.4 1,744,632 - OKGIIK_07885 0.31 +1.1 1,744,632 - OKGIIK_07885 0.31 -0.6 1,744,757 + OKGIIK_07885 0.38 -0.3 1,744,758 - OKGIIK_07885 0.38 -0.3
Or see this region's nucleotide sequence