Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07525

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntkefB and maoC are separated by 86 nucleotidesmaoC and ackA overlap by 4 nucleotides OKGIIK_07520: kefB - cation:proton antiporter, at 1,658,254 to 1,659,459 kefB OKGIIK_07525: maoC - enoyl-CoA hydratase, at 1,659,546 to 1,660,961 maoC OKGIIK_07530: ackA - acetate kinase, at 1,660,958 to 1,662,151 ackA Position (kb) 1659 1660 1661Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1659.340 kb on + strandat 1659.492 kb on + strandat 1659.492 kb on + strandat 1659.492 kb on + strandat 1659.493 kb on - strandat 1659.493 kb on - strandat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.755 kb on + strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1659.756 kb on - strand, within maoCat 1660.008 kb on + strand, within maoCat 1660.008 kb on + strand, within maoCat 1660.009 kb on - strand, within maoCat 1660.416 kb on + strand, within maoCat 1660.416 kb on + strand, within maoCat 1660.416 kb on + strand, within maoCat 1660.416 kb on + strand, within maoCat 1660.417 kb on - strand, within maoCat 1660.417 kb on - strand, within maoCat 1660.417 kb on - strand, within maoCat 1660.417 kb on - strand, within maoCat 1660.417 kb on - strand, within maoCat 1660.417 kb on - strand, within maoCat 1660.417 kb on - strand, within maoCat 1660.812 kb on + strand, within maoCat 1660.812 kb on + strand, within maoCat 1660.812 kb on + strand, within maoCat 1660.812 kb on + strand, within maoCat 1660.812 kb on + strand, within maoCat 1660.813 kb on - strand, within maoCat 1660.813 kb on - strand, within maoCat 1660.813 kb on - strand, within maoCat 1660.813 kb on - strand, within maoCat 1660.813 kb on - strand, within maoCat 1660.813 kb on - strand, within maoCat 1660.813 kb on - strand, within maoCat 1661.165 kb on + strand, within ackAat 1661.166 kb on - strand, within ackAat 1661.166 kb on - strand, within ackAat 1661.166 kb on - strand, within ackAat 1661.183 kb on + strand, within ackAat 1661.183 kb on + strand, within ackAat 1661.183 kb on + strand, within ackAat 1661.183 kb on + strand, within ackAat 1661.183 kb on + strand, within ackAat 1661.183 kb on + strand, within ackAat 1661.183 kb on + strand, within ackAat 1661.183 kb on + strand, within ackAat 1661.184 kb on - strand, within ackAat 1661.184 kb on - strand, within ackAat 1661.267 kb on + strand, within ackAat 1661.267 kb on + strand, within ackAat 1661.267 kb on + strand, within ackAat 1661.267 kb on + strand, within ackAat 1661.268 kb on - strand, within ackAat 1661.268 kb on - strand, within ackAat 1661.268 kb on - strand, within ackAat 1661.268 kb on - strand, within ackAat 1661.268 kb on - strand, within ackAat 1661.268 kb on - strand, within ackAat 1661.268 kb on - strand, within ackAat 1661.268 kb on - strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.318 kb on + strand, within ackAat 1661.319 kb on - strand, within ackAat 1661.319 kb on - strand, within ackAat 1661.319 kb on - strand, within ackAat 1661.319 kb on - strand, within ackAat 1661.319 kb on - strand, within ackAat 1661.319 kb on - strand, within ackAat 1661.319 kb on - strand, within ackAat 1661.319 kb on - strand, within ackAat 1661.319 kb on - strand, within ackAat 1661.519 kb on + strand, within ackAat 1661.519 kb on + strand, within ackAat 1661.519 kb on + strand, within ackAat 1661.519 kb on + strand, within ackAat 1661.520 kb on - strand, within ackAat 1661.520 kb on - strand, within ackAat 1661.520 kb on - strand, within ackAat 1661.525 kb on + strand, within ackAat 1661.525 kb on + strand, within ackAat 1661.526 kb on - strand, within ackAat 1661.526 kb on - strand, within ackAat 1661.526 kb on - strand, within ackAat 1661.552 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.720 kb on + strand, within ackAat 1661.721 kb on - strand, within ackAat 1661.721 kb on - strand, within ackAat 1661.721 kb on - strand, within ackAat 1661.721 kb on - strand, within ackAat 1661.721 kb on - strand, within ackAat 1661.721 kb on - strand, within ackAat 1661.771 kb on + strand, within ackAat 1661.771 kb on + strand, within ackAat 1661.772 kb on - strand, within ackAat 1661.772 kb on - strand, within ackAat 1661.772 kb on - strand, within ackAat 1661.873 kb on + strand, within ackAat 1661.873 kb on + strand, within ackAat 1661.873 kb on + strand, within ackAat 1661.873 kb on + strand, within ackAat 1661.873 kb on + strand, within ackAat 1661.873 kb on + strand, within ackAat 1661.873 kb on + strand, within ackAat 1661.873 kb on + strand, within ackAat 1661.873 kb on + strand, within ackAat 1661.874 kb on - strand, within ackAat 1661.874 kb on - strand, within ackAat 1661.874 kb on - strand, within ackAat 1661.874 kb on - strand, within ackAat 1661.874 kb on - strand, within ackAat 1661.874 kb on - strand, within ackAat 1661.874 kb on - strand, within ackAat 1661.874 kb on - strand, within ackAat 1661.874 kb on - strand, within ackAat 1661.874 kb on - strand, within ackA

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,659,340 + -1.9
1,659,492 + +0.3
1,659,492 + +0.1
1,659,492 + +1.1
1,659,493 - -1.7
1,659,493 - -0.1
1,659,755 + maoC OKGIIK_07525 0.15 -0.9
1,659,755 + maoC OKGIIK_07525 0.15 -1.2
1,659,755 + maoC OKGIIK_07525 0.15 +0.8
1,659,755 + maoC OKGIIK_07525 0.15 +0.3
1,659,755 + maoC OKGIIK_07525 0.15 -2.7
1,659,755 + maoC OKGIIK_07525 0.15 -2.4
1,659,755 + maoC OKGIIK_07525 0.15 -0.3
1,659,755 + maoC OKGIIK_07525 0.15 +0.5
1,659,755 + maoC OKGIIK_07525 0.15 +0.1
1,659,755 + maoC OKGIIK_07525 0.15 -2.0
1,659,755 + maoC OKGIIK_07525 0.15 -1.0
1,659,755 + maoC OKGIIK_07525 0.15 +0.3
1,659,755 + maoC OKGIIK_07525 0.15 -0.1
1,659,755 + maoC OKGIIK_07525 0.15 -0.2
1,659,755 + maoC OKGIIK_07525 0.15 -0.5
1,659,755 + maoC OKGIIK_07525 0.15 -1.2
1,659,755 + maoC OKGIIK_07525 0.15 +0.4
1,659,755 + maoC OKGIIK_07525 0.15 -1.9
1,659,755 + maoC OKGIIK_07525 0.15 -0.8
1,659,755 + maoC OKGIIK_07525 0.15 +0.3
1,659,756 - maoC OKGIIK_07525 0.15 -0.7
1,659,756 - maoC OKGIIK_07525 0.15 +0.9
1,659,756 - maoC OKGIIK_07525 0.15 +0.9
1,659,756 - maoC OKGIIK_07525 0.15 -1.0
1,659,756 - maoC OKGIIK_07525 0.15 -0.9
1,659,756 - maoC OKGIIK_07525 0.15 +0.1
1,659,756 - maoC OKGIIK_07525 0.15 +0.6
1,659,756 - maoC OKGIIK_07525 0.15 -1.0
1,659,756 - maoC OKGIIK_07525 0.15 -2.5
1,659,756 - maoC OKGIIK_07525 0.15 -1.6
1,659,756 - maoC OKGIIK_07525 0.15 +1.7
1,659,756 - maoC OKGIIK_07525 0.15 +0.7
1,659,756 - maoC OKGIIK_07525 0.15 -0.0
1,659,756 - maoC OKGIIK_07525 0.15 -1.8
1,659,756 - maoC OKGIIK_07525 0.15 +0.7
1,659,756 - maoC OKGIIK_07525 0.15 -0.3
1,659,756 - maoC OKGIIK_07525 0.15 -1.3
1,659,756 - maoC OKGIIK_07525 0.15 +0.9
1,659,756 - maoC OKGIIK_07525 0.15 -0.3
1,659,756 - maoC OKGIIK_07525 0.15 +0.6
1,659,756 - maoC OKGIIK_07525 0.15 +0.3
1,659,756 - maoC OKGIIK_07525 0.15 -2.3
1,659,756 - maoC OKGIIK_07525 0.15 -0.3
1,659,756 - maoC OKGIIK_07525 0.15 -0.2
1,659,756 - maoC OKGIIK_07525 0.15 +0.7
1,659,756 - maoC OKGIIK_07525 0.15 +0.3
1,659,756 - maoC OKGIIK_07525 0.15 +1.7
1,660,008 + maoC OKGIIK_07525 0.33 +0.5
1,660,008 + maoC OKGIIK_07525 0.33 +1.7
1,660,009 - maoC OKGIIK_07525 0.33 -1.5
1,660,416 + maoC OKGIIK_07525 0.61 -0.1
1,660,416 + maoC OKGIIK_07525 0.61 -1.3
1,660,416 + maoC OKGIIK_07525 0.61 +0.8
1,660,416 + maoC OKGIIK_07525 0.61 +0.8
1,660,417 - maoC OKGIIK_07525 0.62 -2.1
1,660,417 - maoC OKGIIK_07525 0.62 -0.1
1,660,417 - maoC OKGIIK_07525 0.62 -1.7
1,660,417 - maoC OKGIIK_07525 0.62 +0.9
1,660,417 - maoC OKGIIK_07525 0.62 -0.9
1,660,417 - maoC OKGIIK_07525 0.62 +0.9
1,660,417 - maoC OKGIIK_07525 0.62 -0.4
1,660,812 + maoC OKGIIK_07525 0.89 +0.1
1,660,812 + maoC OKGIIK_07525 0.89 +1.4
1,660,812 + maoC OKGIIK_07525 0.89 -0.3
1,660,812 + maoC OKGIIK_07525 0.89 +1.1
1,660,812 + maoC OKGIIK_07525 0.89 +1.3
1,660,813 - maoC OKGIIK_07525 0.89 -1.7
1,660,813 - maoC OKGIIK_07525 0.89 -1.1
1,660,813 - maoC OKGIIK_07525 0.89 +0.6
1,660,813 - maoC OKGIIK_07525 0.89 -0.1
1,660,813 - maoC OKGIIK_07525 0.89 -0.7
1,660,813 - maoC OKGIIK_07525 0.89 +0.2
1,660,813 - maoC OKGIIK_07525 0.89 +0.3
1,661,165 + ackA OKGIIK_07530 0.17 +1.3
1,661,166 - ackA OKGIIK_07530 0.17 +1.4
1,661,166 - ackA OKGIIK_07530 0.17 -1.6
1,661,166 - ackA OKGIIK_07530 0.17 -0.2
1,661,183 + ackA OKGIIK_07530 0.19 -0.1
1,661,183 + ackA OKGIIK_07530 0.19 +0.5
1,661,183 + ackA OKGIIK_07530 0.19 -0.8
1,661,183 + ackA OKGIIK_07530 0.19 -0.3
1,661,183 + ackA OKGIIK_07530 0.19 -1.4
1,661,183 + ackA OKGIIK_07530 0.19 +0.5
1,661,183 + ackA OKGIIK_07530 0.19 -1.1
1,661,183 + ackA OKGIIK_07530 0.19 -1.9
1,661,184 - ackA OKGIIK_07530 0.19 +1.2
1,661,184 - ackA OKGIIK_07530 0.19 -0.9
1,661,267 + ackA OKGIIK_07530 0.26 +1.1
1,661,267 + ackA OKGIIK_07530 0.26 -1.5
1,661,267 + ackA OKGIIK_07530 0.26 +1.7
1,661,267 + ackA OKGIIK_07530 0.26 +0.2
1,661,268 - ackA OKGIIK_07530 0.26 -0.3
1,661,268 - ackA OKGIIK_07530 0.26 +0.4
1,661,268 - ackA OKGIIK_07530 0.26 +1.7
1,661,268 - ackA OKGIIK_07530 0.26 -1.8
1,661,268 - ackA OKGIIK_07530 0.26 -2.0
1,661,268 - ackA OKGIIK_07530 0.26 +0.5
1,661,268 - ackA OKGIIK_07530 0.26 -0.3
1,661,268 - ackA OKGIIK_07530 0.26 -1.1
1,661,318 + ackA OKGIIK_07530 0.30 -0.6
1,661,318 + ackA OKGIIK_07530 0.30 -0.1
1,661,318 + ackA OKGIIK_07530 0.30 +1.3
1,661,318 + ackA OKGIIK_07530 0.30 -0.4
1,661,318 + ackA OKGIIK_07530 0.30 -0.3
1,661,318 + ackA OKGIIK_07530 0.30 +1.3
1,661,318 + ackA OKGIIK_07530 0.30 +0.5
1,661,318 + ackA OKGIIK_07530 0.30 -0.4
1,661,318 + ackA OKGIIK_07530 0.30 -2.0
1,661,318 + ackA OKGIIK_07530 0.30 -0.3
1,661,318 + ackA OKGIIK_07530 0.30 -0.5
1,661,318 + ackA OKGIIK_07530 0.30 +0.7
1,661,319 - ackA OKGIIK_07530 0.30 -1.3
1,661,319 - ackA OKGIIK_07530 0.30 -1.3
1,661,319 - ackA OKGIIK_07530 0.30 -0.3
1,661,319 - ackA OKGIIK_07530 0.30 +1.2
1,661,319 - ackA OKGIIK_07530 0.30 +0.7
1,661,319 - ackA OKGIIK_07530 0.30 -1.7
1,661,319 - ackA OKGIIK_07530 0.30 -0.4
1,661,319 - ackA OKGIIK_07530 0.30 -0.4
1,661,319 - ackA OKGIIK_07530 0.30 -0.4
1,661,519 + ackA OKGIIK_07530 0.47 -0.6
1,661,519 + ackA OKGIIK_07530 0.47 +0.1
1,661,519 + ackA OKGIIK_07530 0.47 -1.1
1,661,519 + ackA OKGIIK_07530 0.47 -2.0
1,661,520 - ackA OKGIIK_07530 0.47 -0.3
1,661,520 - ackA OKGIIK_07530 0.47 -0.6
1,661,520 - ackA OKGIIK_07530 0.47 -0.9
1,661,525 + ackA OKGIIK_07530 0.47 -0.9
1,661,525 + ackA OKGIIK_07530 0.47 -2.1
1,661,526 - ackA OKGIIK_07530 0.48 +0.4
1,661,526 - ackA OKGIIK_07530 0.48 +0.7
1,661,526 - ackA OKGIIK_07530 0.48 +0.4
1,661,552 + ackA OKGIIK_07530 0.50 +0.7
1,661,720 + ackA OKGIIK_07530 0.64 +0.4
1,661,720 + ackA OKGIIK_07530 0.64 -1.1
1,661,720 + ackA OKGIIK_07530 0.64 -2.2
1,661,720 + ackA OKGIIK_07530 0.64 -1.6
1,661,720 + ackA OKGIIK_07530 0.64 +0.2
1,661,720 + ackA OKGIIK_07530 0.64 +1.3
1,661,720 + ackA OKGIIK_07530 0.64 +0.0
1,661,720 + ackA OKGIIK_07530 0.64 -2.9
1,661,720 + ackA OKGIIK_07530 0.64 -0.3
1,661,720 + ackA OKGIIK_07530 0.64 -2.9
1,661,720 + ackA OKGIIK_07530 0.64 -0.6
1,661,720 + ackA OKGIIK_07530 0.64 +0.6
1,661,721 - ackA OKGIIK_07530 0.64 -0.5
1,661,721 - ackA OKGIIK_07530 0.64 +2.1
1,661,721 - ackA OKGIIK_07530 0.64 -0.3
1,661,721 - ackA OKGIIK_07530 0.64 -1.4
1,661,721 - ackA OKGIIK_07530 0.64 -1.2
1,661,721 - ackA OKGIIK_07530 0.64 -1.1
1,661,771 + ackA OKGIIK_07530 0.68 -0.6
1,661,771 + ackA OKGIIK_07530 0.68 -0.8
1,661,772 - ackA OKGIIK_07530 0.68 -0.9
1,661,772 - ackA OKGIIK_07530 0.68 -0.5
1,661,772 - ackA OKGIIK_07530 0.68 +1.4
1,661,873 + ackA OKGIIK_07530 0.77 -1.4
1,661,873 + ackA OKGIIK_07530 0.77 -1.1
1,661,873 + ackA OKGIIK_07530 0.77 -0.5
1,661,873 + ackA OKGIIK_07530 0.77 -0.9
1,661,873 + ackA OKGIIK_07530 0.77 -0.1
1,661,873 + ackA OKGIIK_07530 0.77 +0.7
1,661,873 + ackA OKGIIK_07530 0.77 -2.7
1,661,873 + ackA OKGIIK_07530 0.77 -0.5
1,661,873 + ackA OKGIIK_07530 0.77 +1.3
1,661,874 - ackA OKGIIK_07530 0.77 -0.9
1,661,874 - ackA OKGIIK_07530 0.77 -1.6
1,661,874 - ackA OKGIIK_07530 0.77 -0.6
1,661,874 - ackA OKGIIK_07530 0.77 +1.0
1,661,874 - ackA OKGIIK_07530 0.77 -0.6
1,661,874 - ackA OKGIIK_07530 0.77 -1.3
1,661,874 - ackA OKGIIK_07530 0.77 -0.3
1,661,874 - ackA OKGIIK_07530 0.77 -1.0
1,661,874 - ackA OKGIIK_07530 0.77 +0.3
1,661,874 - ackA OKGIIK_07530 0.77 -2.2

Or see this region's nucleotide sequence