Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04470 and MPMX19_04471 are separated by 825 nucleotides MPMX19_04471 and MPMX19_04472 are separated by 66 nucleotides
MPMX19_04470: MPMX19_04470 - hypothetical protein, at 836,000 to 836,410
_04470
MPMX19_04471: MPMX19_04471 - Bifunctional protein GlmU, at 837,236 to 838,588
_04471
MPMX19_04472: MPMX19_04472 - Glutamine--fructose-6-phosphate aminotransferase [isomerizing], at 838,655 to 840,481
_04472
Position (kb) 837
838
839 Strain fitness (log2 ratio) -2
-1
0
1
2 at 836.238 kb on - strand, within MPMX19_04470 at 836.591 kb on + strand at 836.591 kb on + strand at 836.591 kb on + strand at 836.591 kb on + strand at 836.591 kb on + strand at 836.591 kb on + strand at 836.591 kb on + strand at 836.591 kb on + strand at 836.591 kb on + strand at 836.591 kb on + strand at 836.592 kb on - strand at 836.592 kb on - strand at 836.592 kb on - strand at 836.592 kb on - strand at 836.592 kb on - strand at 836.592 kb on - strand at 836.592 kb on - strand at 836.592 kb on - strand at 836.592 kb on - strand at 836.592 kb on - strand at 836.592 kb on - strand at 836.592 kb on - strand at 836.614 kb on + strand at 836.614 kb on + strand at 836.614 kb on + strand at 836.614 kb on + strand at 836.615 kb on - strand at 836.664 kb on + strand at 836.664 kb on + strand at 836.664 kb on + strand at 836.664 kb on + strand at 836.664 kb on + strand at 836.664 kb on + strand at 836.665 kb on - strand at 836.665 kb on - strand at 836.665 kb on - strand at 836.698 kb on + strand at 836.699 kb on - strand at 836.712 kb on + strand at 836.712 kb on + strand at 836.712 kb on + strand at 836.712 kb on + strand at 836.713 kb on - strand at 836.713 kb on - strand at 836.713 kb on - strand at 836.713 kb on - strand at 836.751 kb on + strand at 836.893 kb on + strand at 836.893 kb on + strand at 836.893 kb on + strand at 836.894 kb on - strand at 836.894 kb on - strand at 836.894 kb on - strand at 836.894 kb on - strand at 836.894 kb on - strand at 837.032 kb on + strand at 837.033 kb on - strand at 837.033 kb on - strand at 837.157 kb on + strand at 837.176 kb on + strand at 837.176 kb on + strand at 837.176 kb on + strand at 837.176 kb on + strand at 837.176 kb on + strand at 837.176 kb on + strand at 837.176 kb on + strand at 838.586 kb on + strand at 838.586 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 836,238 - MPMX19_04470 0.58 -2.2 836,591 + -1.4 836,591 + +1.6 836,591 + -1.2 836,591 + -0.7 836,591 + +0.4 836,591 + -0.3 836,591 + +0.3 836,591 + +0.0 836,591 + -1.7 836,591 + -0.4 836,592 - +1.3 836,592 - -1.5 836,592 - -1.0 836,592 - -0.7 836,592 - -0.2 836,592 - -0.1 836,592 - +0.3 836,592 - +0.3 836,592 - +0.9 836,592 - -0.3 836,592 - +0.0 836,592 - -0.5 836,614 + -1.0 836,614 + -0.9 836,614 + +0.6 836,614 + -1.0 836,615 - -1.2 836,664 + -0.8 836,664 + +0.1 836,664 + -0.1 836,664 + -0.8 836,664 + -1.6 836,664 + -2.2 836,665 - -0.5 836,665 - -0.2 836,665 - -0.5 836,698 + -0.6 836,699 - -0.2 836,712 + -2.0 836,712 + -2.0 836,712 + -1.2 836,712 + -1.3 836,713 - +2.6 836,713 - +1.0 836,713 - +0.4 836,713 - +0.1 836,751 + -0.1 836,893 + -0.3 836,893 + -0.8 836,893 + -1.0 836,894 - -0.1 836,894 - -0.6 836,894 - -1.2 836,894 - -1.0 836,894 - -0.5 837,032 + -0.4 837,033 - -0.9 837,033 - -0.3 837,157 + -1.0 837,176 + -0.2 837,176 + -1.3 837,176 + -1.3 837,176 + +1.6 837,176 + -1.2 837,176 + -0.2 837,176 + +0.4 838,586 + -0.8 838,586 + -0.6
Or see this region's nucleotide sequence