Strain Fitness in Escherichia coli ECRC100 around OKFHMN_16150

Experiment: Bas58

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas58
3,133,901	-	bcsG	OKFHMN_16140	0.52	+0.5
3,133,964	+	bcsG	OKFHMN_16140	0.55	-0.1
3,133,965	-	bcsG	OKFHMN_16140	0.55	+1.8
3,133,965	-	bcsG	OKFHMN_16140	0.55	-0.1
3,133,993	+	bcsG	OKFHMN_16140	0.57	+0.2
3,133,994	-	bcsG	OKFHMN_16140	0.57	-0.4
3,134,003	+	bcsG	OKFHMN_16140	0.58	+0.1
3,134,053	+	bcsG	OKFHMN_16140	0.61	+0.3
3,134,095	+	bcsG	OKFHMN_16140	0.63	+2.2
3,134,134	+	bcsG	OKFHMN_16140	0.65	-0.0
3,134,135	-	bcsG	OKFHMN_16140	0.66	+0.5
3,134,202	-	bcsG	OKFHMN_16140	0.70	+0.7
3,134,202	-	bcsG	OKFHMN_16140	0.70	+0.8
3,134,257	+	bcsG	OKFHMN_16140	0.73	-0.3
3,134,261	+	bcsG	OKFHMN_16140	0.73	+0.2
3,134,261	+	bcsG	OKFHMN_16140	0.73	-0.1
3,134,261	+	bcsG	OKFHMN_16140	0.73	-1.2
3,134,262	-	bcsG	OKFHMN_16140	0.73	+0.4
3,134,262	-	bcsG	OKFHMN_16140	0.73	-0.2
3,134,262	-	bcsG	OKFHMN_16140	0.73	+0.1
3,134,262	-	bcsG	OKFHMN_16140	0.73	-0.0
3,134,262	-	bcsG	OKFHMN_16140	0.73	+0.1
3,134,273	+	bcsG	OKFHMN_16140	0.74	-0.2
3,134,274	-	bcsG	OKFHMN_16140	0.74	-0.0
3,134,274	-	bcsG	OKFHMN_16140	0.74	+0.1
3,134,339	+	bcsG	OKFHMN_16140	0.78	-1.7
3,134,339	+	bcsG	OKFHMN_16140	0.78	-2.0
3,134,340	-	bcsG	OKFHMN_16140	0.78	-0.6
3,134,372	-	bcsG	OKFHMN_16140	0.80	-0.2
3,134,375	-	bcsG	OKFHMN_16140	0.80	+0.4
3,134,375	-	bcsG	OKFHMN_16140	0.80	+0.3
3,134,400	+	bcsG	OKFHMN_16140	0.81	-0.2
3,134,401	-	bcsG	OKFHMN_16140	0.81	+0.3
3,134,441	+	bcsG	OKFHMN_16140	0.84	-0.1
3,134,442	-	bcsG	OKFHMN_16140	0.84	-0.3
3,134,634	+				+1.8
3,134,794	+	bcsF	OKFHMN_16145	0.44	+0.0
3,134,835	-	bcsF	OKFHMN_16145	0.65	+0.2
3,134,851	+	bcsF	OKFHMN_16145	0.73	-0.4
3,134,851	+	bcsF	OKFHMN_16145	0.73	+0.3
3,134,851	+	bcsF	OKFHMN_16145	0.73	-0.8
3,134,852	-	bcsF	OKFHMN_16145	0.74	-0.3
3,134,872	-	bcsF	OKFHMN_16145	0.84	+1.3
3,134,925	+				+0.1
3,134,926	-				+2.4
3,134,946	+				+0.5
3,134,947	-				-0.2
3,135,095	+	bcsE	OKFHMN_16150	0.13	+0.0
3,135,095	+	bcsE	OKFHMN_16150	0.13	-1.0
3,135,096	-	bcsE	OKFHMN_16150	0.13	+0.4
3,135,134	+	bcsE	OKFHMN_16150	0.15	-1.0
3,135,215	+	bcsE	OKFHMN_16150	0.20	+0.2
3,135,215	+	bcsE	OKFHMN_16150	0.20	-0.9
3,135,316	-	bcsE	OKFHMN_16150	0.27	-0.4
3,135,318	+	bcsE	OKFHMN_16150	0.27	+0.8
3,135,318	+	bcsE	OKFHMN_16150	0.27	+1.8
3,135,318	+	bcsE	OKFHMN_16150	0.27	+3.4
3,135,319	-	bcsE	OKFHMN_16150	0.27	+0.6
3,135,326	+	bcsE	OKFHMN_16150	0.27	-0.7
3,135,350	+	bcsE	OKFHMN_16150	0.29	+0.1
3,135,350	+	bcsE	OKFHMN_16150	0.29	-0.0
3,135,351	-	bcsE	OKFHMN_16150	0.29	-0.3
3,135,414	-	bcsE	OKFHMN_16150	0.33	+0.8
3,135,420	-	bcsE	OKFHMN_16150	0.33	+0.0
3,135,420	-	bcsE	OKFHMN_16150	0.33	+0.4
3,135,433	+	bcsE	OKFHMN_16150	0.34	-0.1
3,135,434	-	bcsE	OKFHMN_16150	0.34	+1.8
3,135,506	+	bcsE	OKFHMN_16150	0.39	+0.2
3,135,512	+	bcsE	OKFHMN_16150	0.39	+0.4
3,135,512	+	bcsE	OKFHMN_16150	0.39	+0.0
3,135,512	+	bcsE	OKFHMN_16150	0.39	+0.5
3,135,512	+	bcsE	OKFHMN_16150	0.39	-0.2
3,135,512	+	bcsE	OKFHMN_16150	0.39	-0.3
3,135,512	+	bcsE	OKFHMN_16150	0.39	+0.4
3,135,513	-	bcsE	OKFHMN_16150	0.39	-0.3
3,135,513	-	bcsE	OKFHMN_16150	0.39	+0.6
3,135,513	-	bcsE	OKFHMN_16150	0.39	+0.0
3,135,513	-	bcsE	OKFHMN_16150	0.39	+0.8
3,135,531	+	bcsE	OKFHMN_16150	0.41	+0.8
3,135,768	+	bcsE	OKFHMN_16150	0.56	-0.7
3,135,837	+	bcsE	OKFHMN_16150	0.60	-1.1
3,135,838	-	bcsE	OKFHMN_16150	0.60	+1.8
3,135,838	-	bcsE	OKFHMN_16150	0.60	+0.2
3,136,013	+	bcsE	OKFHMN_16150	0.71	-0.9
3,136,014	-	bcsE	OKFHMN_16150	0.72	-0.2
3,136,025	+	bcsE	OKFHMN_16150	0.72	+0.5
3,136,121	+	bcsE	OKFHMN_16150	0.78	+0.1
3,136,148	-	bcsE	OKFHMN_16150	0.80	-0.6
3,136,148	-	bcsE	OKFHMN_16150	0.80	-0.5
3,136,148	-	bcsE	OKFHMN_16150	0.80	+0.6
3,136,152	-	bcsE	OKFHMN_16150	0.80	+0.0
3,136,152	-	bcsE	OKFHMN_16150	0.80	-0.5
3,136,190	-	bcsE	OKFHMN_16150	0.83	-0.5
3,136,190	-	bcsE	OKFHMN_16150	0.83	-1.7
3,136,195	-	bcsE	OKFHMN_16150	0.83	+1.8
3,136,213	-	bcsE	OKFHMN_16150	0.84	+0.4
3,136,292	+	bcsE	OKFHMN_16150	0.89	-1.0
3,136,293	-	bcsE	OKFHMN_16150	0.89	-0.2
3,136,352	+				+0.4
3,136,404	-				-0.2
3,136,404	-				-1.3
3,136,404	-				+0.3
3,136,404	-				+0.1
3,136,446	+				-0.5
3,136,447	-				+0.3
3,136,496	+				+0.4
3,136,509	+				-0.3
3,136,534	+				+1.2
3,136,550	+				-0.0
3,136,568	-				-0.2
3,136,671	+				+0.5
3,136,672	-				-2.8
3,136,763	-	bcsR	OKFHMN_16155	0.11	+0.5
3,136,787	+	bcsR	OKFHMN_16155	0.24	-0.1
3,136,787	+	bcsR	OKFHMN_16155	0.24	-0.2
3,136,787	+	bcsR	OKFHMN_16155	0.24	-0.0
3,136,787	+	bcsR	OKFHMN_16155	0.24	-0.4
3,136,787	+	bcsR	OKFHMN_16155	0.24	+0.5
3,136,787	+	bcsR	OKFHMN_16155	0.24	+0.0
3,136,787	+	bcsR	OKFHMN_16155	0.24	+0.3
3,136,788	-	bcsR	OKFHMN_16155	0.24	-0.3
3,136,788	-	bcsR	OKFHMN_16155	0.24	+0.2
3,136,788	-	bcsR	OKFHMN_16155	0.24	-0.3
3,136,790	-	bcsR	OKFHMN_16155	0.25	-0.4
3,136,847	+	bcsR	OKFHMN_16155	0.56	-0.0
3,136,887	+	bcsR	OKFHMN_16155	0.77	+0.6
3,137,085	+	bcsQ	OKFHMN_16160	0.72	-1.4
3,137,086	-	bcsQ	OKFHMN_16160	0.73	-0.4
3,137,124	+				-0.7
3,137,124	+				+0.2
3,137,125	-				+0.0
3,137,125	-				-0.1
3,137,202	-				+0.1
3,137,293	+	bcsQ	OKFHMN_16165	0.25	-0.4
3,137,307	-	bcsQ	OKFHMN_16165	0.28	-0.8
3,137,315	+	bcsQ	OKFHMN_16165	0.29	-0.3
3,137,404	-	bcsQ	OKFHMN_16165	0.46	+1.6
3,137,442	+	bcsQ	OKFHMN_16165	0.53	+0.1
3,137,454	+	bcsQ	OKFHMN_16165	0.55	+0.3