Strain Fitness in Escherichia coli ECRC100 around OKFHMN_13835

Experiment: Bas58

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas58
2,666,744	+	pfkA	OKFHMN_13830	0.18	+0.9
2,666,859	-	pfkA	OKFHMN_13830	0.30	+1.9
2,666,859	-	pfkA	OKFHMN_13830	0.30	-1.8
2,666,859	-	pfkA	OKFHMN_13830	0.30	+1.9
2,666,859	-	pfkA	OKFHMN_13830	0.30	-0.7
2,667,088	-	pfkA	OKFHMN_13830	0.54	+0.3
2,667,124	+	pfkA	OKFHMN_13830	0.58	+0.3
2,667,211	+	pfkA	OKFHMN_13830	0.67	+0.9
2,667,211	+	pfkA	OKFHMN_13830	0.67	-0.9
2,667,212	-	pfkA	OKFHMN_13830	0.67	-0.7
2,667,212	-	pfkA	OKFHMN_13830	0.67	-0.7
2,667,372	+	pfkA	OKFHMN_13830	0.83	-0.5
2,667,383	+	pfkA	OKFHMN_13830	0.85	+0.3
2,667,394	+	pfkA	OKFHMN_13830	0.86	+0.9
2,667,407	-	pfkA	OKFHMN_13830	0.87	-1.1
2,667,427	-	pfkA	OKFHMN_13830	0.89	-0.5
2,667,535	-				-0.9
2,667,560	-				+0.9
2,667,617	-				-0.3
2,667,617	-				+1.1
2,667,620	-				-1.1
2,667,622	-				+0.0
2,667,674	-				+0.3
2,667,703	+				+0.8
2,667,703	+				-0.5
2,667,712	+				+0.3
2,667,723	-				-0.3
2,667,723	-				+0.3
2,667,744	+				-0.1
2,667,745	-				-0.1
2,667,771	-				-0.3
2,667,771	-				+0.4
2,667,830	+	fieF	OKFHMN_13835	0.13	+1.1
2,667,830	+	fieF	OKFHMN_13835	0.13	-0.1
2,667,830	+	fieF	OKFHMN_13835	0.13	+0.2
2,667,831	-	fieF	OKFHMN_13835	0.13	+1.9
2,667,881	+	fieF	OKFHMN_13835	0.19	-0.6
2,667,960	-	fieF	OKFHMN_13835	0.28	+0.6
2,667,985	-	fieF	OKFHMN_13835	0.30	+0.2
2,668,037	+	fieF	OKFHMN_13835	0.36	+0.2
2,668,037	+	fieF	OKFHMN_13835	0.36	+0.9
2,668,038	-	fieF	OKFHMN_13835	0.36	+0.1
2,668,038	-	fieF	OKFHMN_13835	0.36	-0.7
2,668,038	-	fieF	OKFHMN_13835	0.36	+0.3
2,668,039	+	fieF	OKFHMN_13835	0.36	+0.5
2,668,042	-	fieF	OKFHMN_13835	0.37	-0.8
2,668,046	+	fieF	OKFHMN_13835	0.37	-0.5
2,668,046	+	fieF	OKFHMN_13835	0.37	+1.2
2,668,047	-	fieF	OKFHMN_13835	0.37	-0.2
2,668,049	-	fieF	OKFHMN_13835	0.37	+0.1
2,668,140	-	fieF	OKFHMN_13835	0.48	+0.1
2,668,154	-	fieF	OKFHMN_13835	0.49	+1.5
2,668,158	+	fieF	OKFHMN_13835	0.50	+0.4
2,668,158	+	fieF	OKFHMN_13835	0.50	-0.0
2,668,158	+	fieF	OKFHMN_13835	0.50	+1.3
2,668,158	+	fieF	OKFHMN_13835	0.50	-0.4
2,668,159	-	fieF	OKFHMN_13835	0.50	-0.1
2,668,159	-	fieF	OKFHMN_13835	0.50	-0.1
2,668,159	-	fieF	OKFHMN_13835	0.50	-0.6
2,668,159	-	fieF	OKFHMN_13835	0.50	+0.2
2,668,159	-	fieF	OKFHMN_13835	0.50	-0.1
2,668,163	+	fieF	OKFHMN_13835	0.50	-0.1
2,668,163	+	fieF	OKFHMN_13835	0.50	+0.5
2,668,164	-	fieF	OKFHMN_13835	0.50	+0.1
2,668,232	+	fieF	OKFHMN_13835	0.58	+0.1
2,668,296	+	fieF	OKFHMN_13835	0.65	-0.6
2,668,352	+	fieF	OKFHMN_13835	0.71	-0.3
2,668,352	+	fieF	OKFHMN_13835	0.71	-0.5
2,668,352	+	fieF	OKFHMN_13835	0.71	-0.2
2,668,352	+	fieF	OKFHMN_13835	0.71	-0.5
2,668,352	+	fieF	OKFHMN_13835	0.71	+0.7
2,668,353	-	fieF	OKFHMN_13835	0.71	-0.1
2,668,407	-	fieF	OKFHMN_13835	0.77	-0.2
2,668,617	+				-0.0
2,668,618	-				+0.4
2,668,618	-				-0.3
2,668,639	+				+0.1
2,668,639	+				+0.2
2,668,642	+				+0.2
2,668,642	+				+0.3
2,668,643	-				-0.4
2,668,644	+				-0.6
2,668,644	+				-0.3
2,668,672	+				+0.0
2,668,672	+				+0.4
2,668,695	-				+0.0
2,668,760	+				-0.7
2,668,761	-				+0.9
2,668,782	+				-0.7
2,668,783	-				-0.1
2,668,785	+				-0.0
2,668,785	+				+1.0
2,668,786	-				-0.2
2,668,786	-				-1.3
2,668,786	-				-1.3
2,668,792	+				+0.0
2,668,793	-				-0.1
2,668,793	-				-0.6
2,668,902	-	cpxP	OKFHMN_13840	0.28	-0.5
2,669,038	-	cpxP	OKFHMN_13840	0.55	+0.2
2,669,043	+	cpxP	OKFHMN_13840	0.56	+0.4
2,669,077	-	cpxP	OKFHMN_13840	0.63	+0.6
2,669,077	-	cpxP	OKFHMN_13840	0.63	-0.1
2,669,116	+	cpxP	OKFHMN_13840	0.71	-0.1
2,669,116	+	cpxP	OKFHMN_13840	0.71	+0.1
2,669,117	-	cpxP	OKFHMN_13840	0.71	+0.9
2,669,117	-	cpxP	OKFHMN_13840	0.71	-0.1
2,669,117	-	cpxP	OKFHMN_13840	0.71	-0.1
2,669,130	+	cpxP	OKFHMN_13840	0.73	+1.1
2,669,130	+	cpxP	OKFHMN_13840	0.73	-0.1
2,669,131	-	cpxP	OKFHMN_13840	0.74	-0.2
2,669,131	-	cpxP	OKFHMN_13840	0.74	+1.9
2,669,131	-	cpxP	OKFHMN_13840	0.74	+1.3
2,669,155	-	cpxP	OKFHMN_13840	0.78	-2.1
2,669,155	-	cpxP	OKFHMN_13840	0.78	+0.8
2,669,209	+	cpxP	OKFHMN_13840	0.89	+0.6
2,669,210	-	cpxP	OKFHMN_13840	0.89	-1.0
2,669,210	-	cpxP	OKFHMN_13840	0.89	+0.1
2,669,254	+				+0.3
2,669,254	+				+0.5
2,669,254	+				+0.2
2,669,254	+				+1.1
2,669,254	+				+0.2
2,669,254	+				+0.6
2,669,254	+				-0.3
2,669,255	-				-0.0
2,669,255	-				+0.2
2,669,255	-				-0.9
2,669,310	-				+0.3
2,669,353	+				+0.1
2,669,353	+				+0.5
2,669,402	+				-0.5
2,669,428	+				-0.5
2,669,461	+				-0.1
2,669,461	+				-1.2
2,669,566	+	cpxR	OKFHMN_13845	0.22	-1.3
2,669,566	+	cpxR	OKFHMN_13845	0.22	-0.9