Strain Fitness in Escherichia coli ECRC100 around OKFHMN_09740

Experiment: Bas58

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas58
1,811,908	+				+0.9
1,812,134	+	lafU	OKFHMN_09735	0.33	+0.3
1,812,211	+	lafU	OKFHMN_09735	0.45	+1.4
1,812,211	+	lafU	OKFHMN_09735	0.45	+0.8
1,812,212	-	lafU	OKFHMN_09735	0.46	-0.4
1,812,212	-	lafU	OKFHMN_09735	0.46	-1.2
1,812,254	+	lafU	OKFHMN_09735	0.52	-0.3
1,812,257	+	lafU	OKFHMN_09735	0.53	-0.9
1,812,323	+	lafU	OKFHMN_09735	0.63	-1.2
1,812,351	-	lafU	OKFHMN_09735	0.67	+1.7
1,812,425	+	lafU	OKFHMN_09735	0.79	+0.1
1,812,425	+	lafU	OKFHMN_09735	0.79	-0.0
1,812,453	-	lafU	OKFHMN_09735	0.83	-0.6
1,812,723	+				+0.7
1,812,966	-	lfhA	OKFHMN_09740	0.18	-0.2
1,812,969	+	lfhA	OKFHMN_09740	0.18	+0.2
1,812,973	+	lfhA	OKFHMN_09740	0.18	-0.4
1,812,973	+	lfhA	OKFHMN_09740	0.18	-0.4
1,813,006	+	lfhA	OKFHMN_09740	0.20	+1.7
1,813,006	+	lfhA	OKFHMN_09740	0.20	+0.1
1,813,006	+	lfhA	OKFHMN_09740	0.20	-0.2
1,813,006	+	lfhA	OKFHMN_09740	0.20	-0.2
1,813,007	-	lfhA	OKFHMN_09740	0.20	-0.1
1,813,159	+	lfhA	OKFHMN_09740	0.29	-0.6
1,813,453	-	lfhA	OKFHMN_09740	0.46	-0.5
1,813,463	+	lfhA	OKFHMN_09740	0.47	-0.5
1,813,789	+	lfhA	OKFHMN_09740	0.65	-0.3
1,813,789	+	lfhA	OKFHMN_09740	0.65	+0.5
1,813,791	+	lfhA	OKFHMN_09740	0.65	+0.4
1,813,806	+	lfhA	OKFHMN_09740	0.66	+1.0
1,813,984	-	lfhA	OKFHMN_09740	0.77	-1.0
1,814,005	-	lfhA	OKFHMN_09740	0.78	-1.2
1,814,086	+	lfhA	OKFHMN_09740	0.82	+0.3
1,814,088	+	lfhA	OKFHMN_09740	0.83	+1.7
1,814,088	+	lfhA	OKFHMN_09740	0.83	+0.0
1,814,121	+	lfhA	OKFHMN_09740	0.84	-0.1
1,814,188	-	lfhA	OKFHMN_09740	0.88	-0.2
1,814,492	-				+1.5
1,814,537	+				+0.7
1,814,538	-				-0.9
1,814,597	+				-0.1
1,814,599	+				+0.4
1,814,600	-				+0.6
1,814,600	-				+0.0
1,814,600	-				+0.1
1,814,689	-				-0.3
1,814,794	-	rAYT	OKFHMN_09745	0.19	+2.1
1,814,856	+	rAYT	OKFHMN_09745	0.40	+0.0
1,814,856	+	rAYT	OKFHMN_09745	0.40	+2.0
1,814,883	+	rAYT	OKFHMN_09745	0.49	+0.1
1,814,916	+	rAYT	OKFHMN_09745	0.60	-0.0
1,815,011	+				-0.8
1,815,011	+				-0.0
1,815,015	-				-0.2
1,815,056	+				+1.3
1,815,157	+				+0.4
1,815,158	-				-0.0
1,815,342	+	yafL	OKFHMN_09755	0.17	-0.7
1,815,343	-	yafL	OKFHMN_09755	0.17	-0.6
1,815,353	-	yafL	OKFHMN_09755	0.19	+2.4