Strain Fitness in Escherichia coli ECRC100 around OKFHMN_07790

Experiment: Bas58

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas58
1,417,599	-				+0.7
1,417,661	+	fimH	OKFHMN_07785	0.14	+0.5
1,417,662	-	fimH	OKFHMN_07785	0.14	+0.6
1,417,716	+	fimH	OKFHMN_07785	0.19	-0.3
1,417,929	+	fimH	OKFHMN_07785	0.40	-0.2
1,417,976	+	fimH	OKFHMN_07785	0.45	-0.2
1,417,977	-	fimH	OKFHMN_07785	0.45	-0.2
1,418,020	+	fimH	OKFHMN_07785	0.49	+1.4
1,418,021	-	fimH	OKFHMN_07785	0.49	-0.9
1,418,246	+	fimH	OKFHMN_07785	0.72	-0.2
1,418,618	-				+1.4
1,418,691	+				+0.2
1,419,137	-	sfmD	OKFHMN_07790	0.23	+2.4
1,419,141	-	sfmD	OKFHMN_07790	0.23	+0.2
1,419,141	-	sfmD	OKFHMN_07790	0.23	-0.8
1,419,200	-	sfmD	OKFHMN_07790	0.25	+1.4
1,419,200	-	sfmD	OKFHMN_07790	0.25	+0.5
1,419,207	-	sfmD	OKFHMN_07790	0.25	+0.2
1,419,270	+	sfmD	OKFHMN_07790	0.28	-0.6
1,419,464	-	sfmD	OKFHMN_07790	0.35	-0.6
1,419,489	-	sfmD	OKFHMN_07790	0.36	-1.0
1,419,510	-	sfmD	OKFHMN_07790	0.37	-0.6
1,419,554	+	sfmD	OKFHMN_07790	0.39	-0.8
1,419,556	+	sfmD	OKFHMN_07790	0.39	-0.9
1,419,556	+	sfmD	OKFHMN_07790	0.39	+1.4
1,419,557	-	sfmD	OKFHMN_07790	0.39	-0.7
1,419,802	+	sfmD	OKFHMN_07790	0.48	+0.5
1,420,117	+	sfmD	OKFHMN_07790	0.60	-0.3
1,420,220	-	sfmD	OKFHMN_07790	0.64	+0.5
1,420,258	-	sfmD	OKFHMN_07790	0.66	+0.6
1,420,340	-	sfmD	OKFHMN_07790	0.69	+0.9
1,420,900	-				-0.3
1,420,974	-				-0.2
1,420,974	-				+0.4
1,421,136	-				-0.1
1,421,158	-				-0.3
1,421,186	-				+0.4
1,421,415	-	fimC	OKFHMN_07795	0.33	-1.2
1,421,527	-	fimC	OKFHMN_07795	0.49	-0.3
1,421,730	-	fimC	OKFHMN_07795	0.79	-1.1