Experiment: Bas58
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mdtG and msyB are separated by 82 nucleotides msyB and yceK are separated by 0 nucleotides yceK and mdoH are separated by 172 nucleotides mdoH and mdoG are separated by 22 nucleotides
OKFHMN_03775: mdtG - multidrug efflux MFS transporter MdtG, at 601,731 to 602,702
mdtG
OKFHMN_03780: msyB - MysB family protein, at 602,785 to 603,159
msyB
OKFHMN_03785: yceK - YceK/YidQ family lipoprotein, at 603,160 to 603,387
yceK
OKFHMN_03795: mdoH - glucans biosynthesis glucosyltransferase MdoH, at 603,560 to 606,073
mdoH
OKFHMN_03800: mdoG - glucans biosynthesis protein MdoG, at 606,096 to 607,598
mdoG
Position (kb) 603
604
605
606
607 Strain fitness (log2 ratio) -2
-1
0
1
2 at 602.717 kb on + strand at 602.976 kb on - strand, within msyB at 603.032 kb on + strand, within msyB at 603.063 kb on + strand, within msyB at 603.069 kb on - strand, within msyB at 603.157 kb on + strand at 603.619 kb on - strand at 603.791 kb on - strand at 604.462 kb on - strand, within mdoH at 604.543 kb on - strand, within mdoH at 604.705 kb on - strand, within mdoH at 604.918 kb on - strand, within mdoH at 605.081 kb on - strand, within mdoH at 605.083 kb on - strand, within mdoH at 605.083 kb on - strand, within mdoH at 605.083 kb on - strand, within mdoH at 605.083 kb on - strand, within mdoH at 605.245 kb on - strand, within mdoH at 605.245 kb on - strand, within mdoH at 605.357 kb on - strand, within mdoH at 605.391 kb on - strand, within mdoH at 605.421 kb on - strand, within mdoH at 605.421 kb on - strand, within mdoH at 605.423 kb on - strand, within mdoH at 605.423 kb on - strand, within mdoH at 605.540 kb on - strand, within mdoH at 605.540 kb on - strand, within mdoH at 605.641 kb on - strand, within mdoH at 606.098 kb on - strand at 606.119 kb on - strand at 606.273 kb on - strand, within mdoG at 606.363 kb on - strand, within mdoG at 606.647 kb on - strand, within mdoG at 606.833 kb on - strand, within mdoG at 606.966 kb on - strand, within mdoG at 606.979 kb on + strand, within mdoG at 607.016 kb on - strand, within mdoG at 607.032 kb on - strand, within mdoG
Per-strain Table
Position Strand Gene LocusTag Fraction Bas58 remove 602,717 + +2.2 602,976 - msyB OKFHMN_03780 0.51 -1.0 603,032 + msyB OKFHMN_03780 0.66 -1.4 603,063 + msyB OKFHMN_03780 0.74 +1.5 603,069 - msyB OKFHMN_03780 0.76 -0.0 603,157 + -0.5 603,619 - -0.1 603,791 - +1.2 604,462 - mdoH OKFHMN_03795 0.36 -1.7 604,543 - mdoH OKFHMN_03795 0.39 -0.8 604,705 - mdoH OKFHMN_03795 0.46 -0.9 604,918 - mdoH OKFHMN_03795 0.54 -0.8 605,081 - mdoH OKFHMN_03795 0.61 -1.4 605,083 - mdoH OKFHMN_03795 0.61 -0.5 605,083 - mdoH OKFHMN_03795 0.61 -0.9 605,083 - mdoH OKFHMN_03795 0.61 -0.4 605,083 - mdoH OKFHMN_03795 0.61 -0.8 605,245 - mdoH OKFHMN_03795 0.67 -0.4 605,245 - mdoH OKFHMN_03795 0.67 +0.2 605,357 - mdoH OKFHMN_03795 0.71 -1.1 605,391 - mdoH OKFHMN_03795 0.73 -1.3 605,421 - mdoH OKFHMN_03795 0.74 -0.7 605,421 - mdoH OKFHMN_03795 0.74 -1.9 605,423 - mdoH OKFHMN_03795 0.74 -0.9 605,423 - mdoH OKFHMN_03795 0.74 -0.4 605,540 - mdoH OKFHMN_03795 0.79 +1.2 605,540 - mdoH OKFHMN_03795 0.79 -0.8 605,641 - mdoH OKFHMN_03795 0.83 -1.8 606,098 - +1.8 606,119 - -1.2 606,273 - mdoG OKFHMN_03800 0.12 +0.2 606,363 - mdoG OKFHMN_03800 0.18 -1.4 606,647 - mdoG OKFHMN_03800 0.37 +0.2 606,833 - mdoG OKFHMN_03800 0.49 -0.5 606,966 - mdoG OKFHMN_03800 0.58 -1.3 606,979 + mdoG OKFHMN_03800 0.59 -1.6 607,016 - mdoG OKFHMN_03800 0.61 -1.8 607,032 - mdoG OKFHMN_03800 0.62 -1.4
Or see this region's nucleotide sequence