Experiment: Bas58
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt flgA and flgM are separated by 75 nucleotides flgM and flgN are separated by 4 nucleotides flgN and murJ are separated by 39 nucleotides murJ and yceM are separated by 109 nucleotides
OKFHMN_03680: flgA - flagellar basal body P-ring formation protein FlgA, at 586,100 to 586,759
flgA
OKFHMN_03685: flgM - anti-sigma-28 factor FlgM, at 586,835 to 587,128
flgM
OKFHMN_03690: flgN - flagella biosynthesis chaperone FlgN, at 587,133 to 587,549
flgN
OKFHMN_03695: murJ - murein biosynthesis integral membrane protein MurJ, at 587,589 to 589,124
murJ
OKFHMN_03700: yceM - Putative oxidoreductase YceM, at 589,234 to 590,157
yceM
Position (kb) 587
588
589
590 Strain fitness (log2 ratio) -1
0
1 at 586.710 kb on + strand at 586.789 kb on + strand at 587.132 kb on + strand at 589.522 kb on - strand, within yceM at 589.598 kb on - strand, within yceM at 589.598 kb on - strand, within yceM at 589.665 kb on - strand, within yceM at 589.686 kb on - strand, within yceM at 589.686 kb on - strand, within yceM at 589.895 kb on - strand, within yceM at 589.910 kb on - strand, within yceM
Per-strain Table
Position Strand Gene LocusTag Fraction Bas58 remove 586,710 + +1.2 586,789 + +0.2 587,132 + +0.4 589,522 - yceM OKFHMN_03700 0.31 -0.5 589,598 - yceM OKFHMN_03700 0.39 +0.9 589,598 - yceM OKFHMN_03700 0.39 +0.4 589,665 - yceM OKFHMN_03700 0.47 +0.5 589,686 - yceM OKFHMN_03700 0.49 -0.4 589,686 - yceM OKFHMN_03700 0.49 -1.6 589,895 - yceM OKFHMN_03700 0.72 +0.2 589,910 - yceM OKFHMN_03700 0.73 -0.6
Or see this region's nucleotide sequence