Strain Fitness in Escherichia coli ECRC100 around OKFHMN_02720

Experiment: Bas58

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKFHMN_02710 and tnpB are separated by 304 nucleotidestnpB and tnpB overlap by 4 nucleotidestnpB and OKFHMN_02725 are separated by 49 nucleotides OKFHMN_02710: OKFHMN_02710 - hypothetical protein, at 434,824 to 435,093 _02710 OKFHMN_02715: tnpB - IS66 family insertion sequence element accessory protein TnpB, at 435,398 to 435,778 tnpB OKFHMN_02720: tnpB - IS66 family insertion sequence element accessory protein TnpB, at 435,775 to 436,122 tnpB OKFHMN_02725: OKFHMN_02725 - IS66-like element ISEc8 family transposase, at 436,172 to 437,710 _02725 Position (kb) 435 436 437Strain fitness (log2 ratio) -1 0 1at 435.061 kb on - strand, within OKFHMN_02710at 435.308 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas58
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435,061 - OKFHMN_02710 0.88 +0.0
435,308 - +0.5

Or see this region's nucleotide sequence