Experiment: Bas58
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yejE and yejB overlap by 1 nucleotides yejB and yejA are separated by 0 nucleotides
OKFHMN_23380: yejE - Inner membrane ABC transporter permease protein YejE, at 4,562,129 to 4,563,154
yejE
OKFHMN_23385: yejB - Inner membrane ABC transporter permease protein YejB, at 4,563,154 to 4,564,248
yejB
OKFHMN_23390: yejA - Uncharacterized protein YejA, at 4,564,249 to 4,566,063
yejA
Position (kb) 4563
4564
4565 Strain fitness (log2 ratio) -1
0
1 at 4562.261 kb on + strand, within yejE at 4562.345 kb on - strand, within yejE at 4562.349 kb on - strand, within yejE at 4562.398 kb on + strand, within yejE at 4562.399 kb on - strand, within yejE at 4562.527 kb on + strand, within yejE at 4562.528 kb on - strand, within yejE at 4562.610 kb on - strand, within yejE at 4562.610 kb on - strand, within yejE at 4562.664 kb on - strand, within yejE at 4562.749 kb on + strand, within yejE at 4562.749 kb on + strand, within yejE at 4562.988 kb on + strand, within yejE at 4563.003 kb on + strand, within yejE at 4563.003 kb on + strand, within yejE at 4563.035 kb on - strand, within yejE at 4563.155 kb on + strand at 4563.172 kb on + strand at 4563.473 kb on + strand, within yejB at 4563.474 kb on - strand, within yejB at 4563.485 kb on - strand, within yejB at 4563.485 kb on - strand, within yejB at 4563.516 kb on + strand, within yejB at 4563.656 kb on + strand, within yejB at 4563.729 kb on + strand, within yejB at 4563.766 kb on - strand, within yejB at 4563.920 kb on + strand, within yejB at 4564.006 kb on + strand, within yejB at 4564.114 kb on - strand, within yejB at 4564.202 kb on - strand at 4564.302 kb on - strand at 4564.392 kb on - strand at 4564.413 kb on - strand at 4564.536 kb on + strand, within yejA at 4564.537 kb on - strand, within yejA at 4564.537 kb on - strand, within yejA at 4564.538 kb on + strand, within yejA at 4564.538 kb on + strand, within yejA at 4564.737 kb on + strand, within yejA at 4564.760 kb on - strand, within yejA at 4564.872 kb on - strand, within yejA at 4565.125 kb on - strand, within yejA
Per-strain Table
Position Strand Gene LocusTag Fraction Bas58 remove 4,562,261 + yejE OKFHMN_23380 0.13 +0.1 4,562,345 - yejE OKFHMN_23380 0.21 +0.2 4,562,349 - yejE OKFHMN_23380 0.21 -0.4 4,562,398 + yejE OKFHMN_23380 0.26 +0.1 4,562,399 - yejE OKFHMN_23380 0.26 -0.6 4,562,527 + yejE OKFHMN_23380 0.39 +0.9 4,562,528 - yejE OKFHMN_23380 0.39 -0.7 4,562,610 - yejE OKFHMN_23380 0.47 +0.4 4,562,610 - yejE OKFHMN_23380 0.47 -0.0 4,562,664 - yejE OKFHMN_23380 0.52 +0.3 4,562,749 + yejE OKFHMN_23380 0.60 +1.3 4,562,749 + yejE OKFHMN_23380 0.60 +0.7 4,562,988 + yejE OKFHMN_23380 0.84 +0.5 4,563,003 + yejE OKFHMN_23380 0.85 -1.1 4,563,003 + yejE OKFHMN_23380 0.85 -0.4 4,563,035 - yejE OKFHMN_23380 0.88 -0.4 4,563,155 + +1.1 4,563,172 + -0.4 4,563,473 + yejB OKFHMN_23385 0.29 +0.1 4,563,474 - yejB OKFHMN_23385 0.29 -0.4 4,563,485 - yejB OKFHMN_23385 0.30 -0.6 4,563,485 - yejB OKFHMN_23385 0.30 +1.1 4,563,516 + yejB OKFHMN_23385 0.33 +0.0 4,563,656 + yejB OKFHMN_23385 0.46 +1.2 4,563,729 + yejB OKFHMN_23385 0.53 -0.2 4,563,766 - yejB OKFHMN_23385 0.56 -0.9 4,563,920 + yejB OKFHMN_23385 0.70 -1.7 4,564,006 + yejB OKFHMN_23385 0.78 -1.1 4,564,114 - yejB OKFHMN_23385 0.88 +0.7 4,564,202 - -0.7 4,564,302 - +0.3 4,564,392 - -0.9 4,564,413 - -1.1 4,564,536 + yejA OKFHMN_23390 0.16 +0.6 4,564,537 - yejA OKFHMN_23390 0.16 -1.3 4,564,537 - yejA OKFHMN_23390 0.16 +0.1 4,564,538 + yejA OKFHMN_23390 0.16 -1.4 4,564,538 + yejA OKFHMN_23390 0.16 +0.0 4,564,737 + yejA OKFHMN_23390 0.27 -1.1 4,564,760 - yejA OKFHMN_23390 0.28 +1.6 4,564,872 - yejA OKFHMN_23390 0.34 +1.6 4,565,125 - yejA OKFHMN_23390 0.48 +1.6
Or see this region's nucleotide sequence