Strain Fitness in Escherichia coli ECRC100 around OKFHMN_19710

Experiment: Bas58

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas58
3,834,458	+	xdhC	OKFHMN_19700	0.76	-0.1
3,834,458	+	xdhC	OKFHMN_19700	0.76	-0.4
3,834,809	-	xdhB	OKFHMN_19705	0.27	+1.3
3,834,868	-	xdhB	OKFHMN_19705	0.34	-0.4
3,834,891	-	xdhB	OKFHMN_19705	0.37	+0.1
3,835,055	+	xdhB	OKFHMN_19705	0.55	-0.9
3,835,116	-	xdhB	OKFHMN_19705	0.62	+1.2
3,835,194	+	xdhB	OKFHMN_19705	0.71	-0.1
3,835,195	-	xdhB	OKFHMN_19705	0.71	-0.1
3,835,204	+	xdhB	OKFHMN_19705	0.72	-0.3
3,835,237	-	xdhB	OKFHMN_19705	0.76	-0.6
3,835,237	-	xdhB	OKFHMN_19705	0.76	+1.2
3,835,263	+	xdhB	OKFHMN_19705	0.79	+0.6
3,835,342	+	xdhB	OKFHMN_19705	0.88	+0.3
3,835,427	+				+0.3
3,835,428	-				-0.5
3,835,428	-				+0.4
3,835,488	+				-0.2
3,835,517	-				+0.9
3,835,600	+				+0.2
3,835,600	+				+0.3
3,835,600	+				+0.6
3,835,600	+				+0.7
3,835,601	-				+1.0
3,835,601	-				-0.9
3,835,601	-				-0.3
3,835,601	-				+1.2
3,835,683	+				+0.1
3,835,683	+				+0.2
3,835,684	-				+0.6
3,835,745	+	xdhA	OKFHMN_19710	0.13	+0.6
3,835,781	+	xdhA	OKFHMN_19710	0.14	-0.7
3,835,782	-	xdhA	OKFHMN_19710	0.14	+1.9
3,835,813	+	xdhA	OKFHMN_19710	0.15	+0.1
3,835,814	-	xdhA	OKFHMN_19710	0.16	-0.1
3,835,894	+	xdhA	OKFHMN_19710	0.19	+0.1
3,835,894	+	xdhA	OKFHMN_19710	0.19	-0.3
3,835,895	-	xdhA	OKFHMN_19710	0.19	+1.6
3,835,972	-	xdhA	OKFHMN_19710	0.22	-1.3
3,836,039	-	xdhA	OKFHMN_19710	0.25	-0.4
3,836,048	+	xdhA	OKFHMN_19710	0.26	+0.0
3,836,078	+	xdhA	OKFHMN_19710	0.27	+1.0
3,836,114	+	xdhA	OKFHMN_19710	0.29	-0.3
3,836,154	+	xdhA	OKFHMN_19710	0.30	+0.4
3,836,154	+	xdhA	OKFHMN_19710	0.30	+0.1
3,836,155	-	xdhA	OKFHMN_19710	0.30	+0.1
3,836,194	+	xdhA	OKFHMN_19710	0.32	+0.9
3,836,360	+	xdhA	OKFHMN_19710	0.39	-0.9
3,836,387	-	xdhA	OKFHMN_19710	0.40	+0.1
3,836,394	+	xdhA	OKFHMN_19710	0.41	+0.0
3,836,394	+	xdhA	OKFHMN_19710	0.41	-1.9
3,836,546	-	xdhA	OKFHMN_19710	0.47	-0.9
3,836,596	+	xdhA	OKFHMN_19710	0.50	+0.1
3,836,596	+	xdhA	OKFHMN_19710	0.50	+0.2
3,836,626	+	xdhA	OKFHMN_19710	0.51	+0.7
3,836,643	-	xdhA	OKFHMN_19710	0.52	+0.1
3,836,696	-	xdhA	OKFHMN_19710	0.54	-0.4
3,836,697	+	xdhA	OKFHMN_19710	0.54	-0.2
3,836,697	+	xdhA	OKFHMN_19710	0.54	+0.7
3,836,715	+	xdhA	OKFHMN_19710	0.55	-0.7
3,836,716	-	xdhA	OKFHMN_19710	0.55	-0.4
3,836,722	-	xdhA	OKFHMN_19710	0.55	+0.2
3,836,737	-	xdhA	OKFHMN_19710	0.56	+0.3
3,836,753	-	xdhA	OKFHMN_19710	0.56	-0.3
3,836,789	+	xdhA	OKFHMN_19710	0.58	+0.9
3,836,789	+	xdhA	OKFHMN_19710	0.58	+0.3
3,836,789	+	xdhA	OKFHMN_19710	0.58	+0.5
3,836,793	+	xdhA	OKFHMN_19710	0.58	-0.4
3,836,794	-	xdhA	OKFHMN_19710	0.58	-0.1
3,836,794	-	xdhA	OKFHMN_19710	0.58	+0.4
3,836,794	-	xdhA	OKFHMN_19710	0.58	+0.8
3,836,806	+	xdhA	OKFHMN_19710	0.59	+0.6
3,836,825	-	xdhA	OKFHMN_19710	0.60	-0.7
3,836,826	+	xdhA	OKFHMN_19710	0.60	+0.5
3,836,827	-	xdhA	OKFHMN_19710	0.60	+1.3
3,836,872	+	xdhA	OKFHMN_19710	0.62	+0.1
3,836,873	-	xdhA	OKFHMN_19710	0.62	-0.6
3,836,875	+	xdhA	OKFHMN_19710	0.62	-0.0
3,836,987	+	xdhA	OKFHMN_19710	0.67	+0.3
3,836,988	-	xdhA	OKFHMN_19710	0.67	-0.0
3,837,119	-	xdhA	OKFHMN_19710	0.72	+0.7
3,837,156	-	xdhA	OKFHMN_19710	0.74	-0.2
3,837,206	+	xdhA	OKFHMN_19710	0.76	-0.2
3,837,206	+	xdhA	OKFHMN_19710	0.76	+0.2
3,837,273	-	xdhA	OKFHMN_19710	0.79	-0.0
3,837,449	+	xdhA	OKFHMN_19710	0.87	+0.5
3,837,450	-	xdhA	OKFHMN_19710	0.87	-0.2
3,837,512	-	xdhA	OKFHMN_19710	0.89	+1.4
3,837,558	-				+0.8
3,837,558	-				+0.1
3,837,566	+				-0.3
3,837,592	+				+2.6
3,837,593	-				-0.3
3,837,597	-				-0.4
3,837,597	-				+0.0
3,837,623	-				+0.7
3,837,626	+				+0.1
3,837,627	-				+0.3
3,837,627	-				-1.3
3,837,630	+				+0.1
3,837,631	-				+0.4
3,837,661	-				-1.6
3,837,670	+				+0.2
3,837,671	-				+0.6
3,837,671	-				+0.9
3,837,672	+				-1.1
3,837,695	-				-0.1
3,837,695	-				+0.2
3,837,800	-				+0.6
3,837,805	-				-1.7
3,837,805	-				-0.4
3,837,805	-				+0.6
3,837,805	-				-0.4
3,837,871	-				-0.1
3,837,884	+				+0.4
3,837,884	+				-0.5
3,837,885	-				-1.2
3,837,885	-				-1.1
3,837,920	+				-0.1
3,837,920	+				+0.3
3,837,920	+				+0.8
3,837,920	+				+1.4
3,837,920	+				+0.2
3,837,921	-				-1.1
3,837,930	+				-0.4
3,838,022	-				+1.9
3,838,022	-				-0.1
3,838,030	+				+1.4
3,838,045	-				+0.0
3,838,132	+				+0.3
3,838,138	-				-0.3
3,838,268	+	actS	OKFHMN_19715	0.13	+0.7
3,838,278	+	actS	OKFHMN_19715	0.14	+0.3
3,838,279	-	actS	OKFHMN_19715	0.14	+0.6
3,838,293	+	actS	OKFHMN_19715	0.16	-0.1
3,838,313	+	actS	OKFHMN_19715	0.19	-1.4
3,838,318	+	actS	OKFHMN_19715	0.20	-0.0
3,838,319	-	actS	OKFHMN_19715	0.20	+0.4
3,838,319	-	actS	OKFHMN_19715	0.20	+0.3
3,838,319	-	actS	OKFHMN_19715	0.20	+2.9
3,838,319	-	actS	OKFHMN_19715	0.20	-0.1
3,838,319	-	actS	OKFHMN_19715	0.20	-0.4
3,838,389	+	actS	OKFHMN_19715	0.29	-2.2
3,838,389	+	actS	OKFHMN_19715	0.29	+0.3
3,838,389	+	actS	OKFHMN_19715	0.29	-0.4
3,838,436	+	actS	OKFHMN_19715	0.35	+0.1
3,838,442	+	actS	OKFHMN_19715	0.36	-0.1
3,838,443	-	actS	OKFHMN_19715	0.36	-1.6
3,838,446	-	actS	OKFHMN_19715	0.37	+0.4
3,838,451	+	actS	OKFHMN_19715	0.37	-0.4
3,838,451	+	actS	OKFHMN_19715	0.37	+0.3
3,838,532	-	actS	OKFHMN_19715	0.48	-0.8
3,838,571	+	actS	OKFHMN_19715	0.53	-0.1
3,838,581	+	actS	OKFHMN_19715	0.54	+0.6
3,838,604	+	actS	OKFHMN_19715	0.57	-0.2
3,838,640	+	actS	OKFHMN_19715	0.62	-1.4
3,838,671	+	actS	OKFHMN_19715	0.66	+0.5
3,838,671	+	actS	OKFHMN_19715	0.66	+0.7
3,838,672	-	actS	OKFHMN_19715	0.66	+0.9
3,838,715	+	actS	OKFHMN_19715	0.72	+0.3