Experiment: Bas58
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybhN and ybhM are separated by 35 nucleotides ybhM and ybhL are separated by 207 nucleotides ybhL and moaE are separated by 135 nucleotides moaE and moaD are separated by 1 nucleotides moaD and moaC overlap by 8 nucleotides
OKFHMN_06335: ybhN - Inner membrane protein YbhN, at 1,128,409 to 1,129,365
ybhN
OKFHMN_06340: ybhM - Uncharacterized protein YbhM, at 1,129,401 to 1,130,114
ybhM
OKFHMN_06345: ybhL - Inner membrane protein YbhL, at 1,130,322 to 1,131,026
ybhL
OKFHMN_06350: moaE - molybdopterin synthase catalytic subunit MoaE, at 1,131,162 to 1,131,614
moaE
OKFHMN_06355: moaD - molybdopterin synthase sulfur carrier subunit, at 1,131,616 to 1,131,861
moaD
OKFHMN_06360: moaC - cyclic pyranopterin monophosphate synthase MoaC, at 1,131,854 to 1,132,339
moaC
Position (kb) 1130
1131
1132 Strain fitness (log2 ratio) -1
0
1
2
3 at 1129.371 kb on - strand at 1129.375 kb on - strand at 1129.506 kb on - strand, within ybhM at 1129.589 kb on + strand, within ybhM at 1129.861 kb on - strand, within ybhM at 1129.924 kb on - strand, within ybhM at 1130.436 kb on - strand, within ybhL at 1130.635 kb on + strand, within ybhL at 1130.642 kb on - strand, within ybhL at 1130.685 kb on - strand, within ybhL at 1130.706 kb on - strand, within ybhL at 1130.707 kb on + strand, within ybhL at 1130.732 kb on + strand, within ybhL at 1130.954 kb on - strand, within ybhL at 1130.966 kb on + strand at 1130.968 kb on + strand at 1130.968 kb on + strand at 1131.044 kb on - strand at 1131.052 kb on + strand at 1131.057 kb on + strand at 1131.057 kb on + strand at 1131.163 kb on + strand at 1131.352 kb on - strand, within moaE at 1131.618 kb on - strand at 1131.709 kb on + strand, within moaD at 1131.960 kb on + strand, within moaC at 1131.960 kb on + strand, within moaC
Per-strain Table
Position Strand Gene LocusTag Fraction Bas58 remove 1,129,371 - -0.0 1,129,375 - +3.1 1,129,506 - ybhM OKFHMN_06340 0.15 +0.3 1,129,589 + ybhM OKFHMN_06340 0.26 -0.0 1,129,861 - ybhM OKFHMN_06340 0.64 +1.0 1,129,924 - ybhM OKFHMN_06340 0.73 -0.3 1,130,436 - ybhL OKFHMN_06345 0.16 -0.2 1,130,635 + ybhL OKFHMN_06345 0.44 -1.0 1,130,642 - ybhL OKFHMN_06345 0.45 -0.3 1,130,685 - ybhL OKFHMN_06345 0.51 -0.6 1,130,706 - ybhL OKFHMN_06345 0.54 +0.6 1,130,707 + ybhL OKFHMN_06345 0.55 +2.6 1,130,732 + ybhL OKFHMN_06345 0.58 +1.2 1,130,954 - ybhL OKFHMN_06345 0.90 +1.6 1,130,966 + +0.2 1,130,968 + +0.9 1,130,968 + +2.1 1,131,044 - +0.7 1,131,052 + +0.7 1,131,057 + +1.6 1,131,057 + +0.6 1,131,163 + -1.0 1,131,352 - moaE OKFHMN_06350 0.42 -0.4 1,131,618 - +0.0 1,131,709 + moaD OKFHMN_06355 0.38 -0.8 1,131,960 + moaC OKFHMN_06360 0.22 +0.4 1,131,960 + moaC OKFHMN_06360 0.22 +1.6
Or see this region's nucleotide sequence