Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14445

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_14440 and OKGIIK_14445 are separated by 612 nucleotidesOKGIIK_14445 and OKGIIK_14450 are separated by 1 nucleotides OKGIIK_14440: OKGIIK_14440 - IS5 family transposase, at 3,155,496 to 3,156,539 _14440 OKGIIK_14445: OKGIIK_14445 - DUF2945 domain-containing protein, at 3,157,152 to 3,157,364 _14445 OKGIIK_14450: OKGIIK_14450 - DUF488 domain-containing protein, at 3,157,366 to 3,157,911 _14450 Position (kb) 3157 3158Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3156.662 kb on + strandat 3156.662 kb on + strandat 3156.662 kb on + strandat 3156.662 kb on + strandat 3156.662 kb on + strandat 3156.722 kb on + strandat 3156.722 kb on + strandat 3156.722 kb on + strandat 3156.722 kb on + strandat 3156.723 kb on - strandat 3156.723 kb on - strandat 3156.723 kb on - strandat 3156.723 kb on - strandat 3156.723 kb on - strandat 3156.739 kb on + strandat 3156.740 kb on - strandat 3156.740 kb on - strandat 3156.774 kb on + strandat 3156.774 kb on + strandat 3156.774 kb on + strandat 3156.774 kb on + strandat 3156.775 kb on - strandat 3156.775 kb on - strandat 3156.782 kb on + strandat 3156.783 kb on - strandat 3156.783 kb on - strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.797 kb on + strandat 3156.798 kb on - strandat 3156.798 kb on - strandat 3156.798 kb on - strandat 3156.798 kb on - strandat 3156.798 kb on - strandat 3156.804 kb on + strandat 3156.804 kb on + strandat 3156.805 kb on - strandat 3156.833 kb on + strandat 3156.833 kb on + strandat 3156.833 kb on + strandat 3156.834 kb on - strandat 3156.834 kb on - strandat 3156.834 kb on - strandat 3156.834 kb on - strandat 3156.880 kb on + strandat 3156.880 kb on + strandat 3156.880 kb on + strandat 3156.881 kb on - strandat 3156.893 kb on + strandat 3156.986 kb on + strandat 3156.986 kb on + strandat 3156.986 kb on + strandat 3156.987 kb on - strandat 3157.070 kb on + strandat 3157.070 kb on + strandat 3157.071 kb on - strandat 3157.108 kb on + strandat 3157.108 kb on + strandat 3157.108 kb on + strandat 3157.109 kb on - strandat 3157.109 kb on - strandat 3157.109 kb on - strandat 3157.109 kb on - strandat 3157.112 kb on + strandat 3157.113 kb on - strandat 3157.113 kb on - strandat 3157.113 kb on - strandat 3157.122 kb on + strandat 3157.122 kb on + strandat 3157.123 kb on - strandat 3157.123 kb on - strandat 3157.123 kb on - strandat 3157.126 kb on + strandat 3157.126 kb on + strandat 3157.126 kb on + strandat 3157.126 kb on + strandat 3157.126 kb on + strandat 3157.126 kb on + strandat 3157.126 kb on + strandat 3157.126 kb on + strandat 3157.126 kb on + strandat 3157.126 kb on + strandat 3157.126 kb on + strandat 3157.127 kb on - strandat 3157.127 kb on - strandat 3157.127 kb on - strandat 3157.127 kb on - strandat 3157.206 kb on + strand, within OKGIIK_14445at 3157.207 kb on - strand, within OKGIIK_14445at 3157.207 kb on - strand, within OKGIIK_14445at 3157.251 kb on + strand, within OKGIIK_14445at 3157.251 kb on + strand, within OKGIIK_14445at 3157.251 kb on + strand, within OKGIIK_14445at 3157.251 kb on + strand, within OKGIIK_14445at 3157.252 kb on - strand, within OKGIIK_14445at 3157.293 kb on + strand, within OKGIIK_14445at 3157.294 kb on - strand, within OKGIIK_14445at 3157.448 kb on - strand, within OKGIIK_14450at 3157.651 kb on + strand, within OKGIIK_14450at 3157.651 kb on + strand, within OKGIIK_14450at 3157.651 kb on + strand, within OKGIIK_14450at 3157.652 kb on - strand, within OKGIIK_14450at 3157.652 kb on - strand, within OKGIIK_14450at 3157.652 kb on - strand, within OKGIIK_14450at 3157.652 kb on - strand, within OKGIIK_14450at 3157.652 kb on - strand, within OKGIIK_14450at 3157.843 kb on + strand, within OKGIIK_14450at 3157.843 kb on + strand, within OKGIIK_14450at 3157.843 kb on + strand, within OKGIIK_14450at 3157.843 kb on + strand, within OKGIIK_14450at 3157.843 kb on + strand, within OKGIIK_14450at 3157.843 kb on + strand, within OKGIIK_14450at 3157.843 kb on + strand, within OKGIIK_14450at 3157.844 kb on - strand, within OKGIIK_14450at 3157.844 kb on - strand, within OKGIIK_14450at 3157.844 kb on - strand, within OKGIIK_14450at 3157.844 kb on - strand, within OKGIIK_14450at 3157.882 kb on + strandat 3157.883 kb on - strandat 3157.883 kb on - strandat 3157.883 kb on - strandat 3157.909 kb on + strandat 3157.910 kb on - strandat 3157.910 kb on - strandat 3157.910 kb on - strandat 3157.910 kb on - strandat 3157.910 kb on - strandat 3158.202 kb on + strandat 3158.222 kb on - strandat 3158.261 kb on + strandat 3158.261 kb on + strandat 3158.261 kb on + strandat 3158.261 kb on + strandat 3158.261 kb on + strandat 3158.261 kb on + strandat 3158.262 kb on - strandat 3158.262 kb on - strandat 3158.262 kb on - strandat 3158.262 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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3,156,662 + -1.2
3,156,662 + -0.4
3,156,662 + -1.1
3,156,662 + +0.1
3,156,662 + +0.3
3,156,722 + -0.8
3,156,722 + -0.2
3,156,722 + -2.5
3,156,722 + +0.1
3,156,723 - -0.9
3,156,723 - -1.5
3,156,723 - -1.5
3,156,723 - -1.2
3,156,723 - -2.4
3,156,739 + -0.2
3,156,740 - +0.2
3,156,740 - -0.3
3,156,774 + -1.2
3,156,774 + -1.1
3,156,774 + -1.2
3,156,774 + -0.6
3,156,775 - -0.9
3,156,775 - -0.9
3,156,782 + +0.4
3,156,783 - -1.0
3,156,783 - -0.2
3,156,797 + -0.1
3,156,797 + -0.2
3,156,797 + +1.1
3,156,797 + -1.4
3,156,797 + -1.3
3,156,797 + -1.6
3,156,797 + +0.1
3,156,797 + -0.2
3,156,797 + -3.2
3,156,797 + -0.6
3,156,797 + +1.1
3,156,797 + -1.8
3,156,797 + +0.7
3,156,797 + +0.2
3,156,798 - -0.6
3,156,798 - -1.0
3,156,798 - +0.2
3,156,798 - -0.2
3,156,798 - +0.6
3,156,804 + -1.8
3,156,804 + -0.5
3,156,805 - -1.8
3,156,833 + -1.5
3,156,833 + -2.4
3,156,833 + +1.1
3,156,834 - -2.3
3,156,834 - -0.3
3,156,834 - -0.3
3,156,834 - +0.0
3,156,880 + +0.5
3,156,880 + -0.1
3,156,880 + -2.4
3,156,881 - -1.7
3,156,893 + +0.8
3,156,986 + -0.2
3,156,986 + +0.8
3,156,986 + -1.2
3,156,987 - +1.2
3,157,070 + +0.5
3,157,070 + +0.8
3,157,071 - +1.4
3,157,108 + -0.7
3,157,108 + -0.8
3,157,108 + -0.5
3,157,109 - -2.0
3,157,109 - +0.0
3,157,109 - +0.4
3,157,109 - -1.1
3,157,112 + -0.1
3,157,113 - +0.2
3,157,113 - -0.3
3,157,113 - -0.1
3,157,122 + -0.8
3,157,122 + -0.6
3,157,123 - +1.8
3,157,123 - -0.5
3,157,123 - -0.8
3,157,126 + -0.5
3,157,126 + +0.4
3,157,126 + +0.8
3,157,126 + +0.8
3,157,126 + -1.8
3,157,126 + +2.6
3,157,126 + -1.2
3,157,126 + -0.1
3,157,126 + +0.2
3,157,126 + -0.6
3,157,126 + -2.7
3,157,127 - -1.2
3,157,127 - -0.8
3,157,127 - -1.0
3,157,127 - +1.3
3,157,206 + OKGIIK_14445 0.25 -1.2
3,157,207 - OKGIIK_14445 0.26 -1.6
3,157,207 - OKGIIK_14445 0.26 -0.1
3,157,251 + OKGIIK_14445 0.46 -1.7
3,157,251 + OKGIIK_14445 0.46 -1.5
3,157,251 + OKGIIK_14445 0.46 -1.4
3,157,251 + OKGIIK_14445 0.46 +0.8
3,157,252 - OKGIIK_14445 0.47 -1.1
3,157,293 + OKGIIK_14445 0.66 -1.9
3,157,294 - OKGIIK_14445 0.67 -1.5
3,157,448 - OKGIIK_14450 0.15 -0.8
3,157,651 + OKGIIK_14450 0.52 -0.6
3,157,651 + OKGIIK_14450 0.52 -0.4
3,157,651 + OKGIIK_14450 0.52 -0.8
3,157,652 - OKGIIK_14450 0.52 -0.8
3,157,652 - OKGIIK_14450 0.52 -1.5
3,157,652 - OKGIIK_14450 0.52 +2.1
3,157,652 - OKGIIK_14450 0.52 -0.2
3,157,652 - OKGIIK_14450 0.52 -0.4
3,157,843 + OKGIIK_14450 0.87 -1.4
3,157,843 + OKGIIK_14450 0.87 +0.5
3,157,843 + OKGIIK_14450 0.87 -1.5
3,157,843 + OKGIIK_14450 0.87 -0.2
3,157,843 + OKGIIK_14450 0.87 +0.0
3,157,843 + OKGIIK_14450 0.87 +0.2
3,157,843 + OKGIIK_14450 0.87 -2.2
3,157,844 - OKGIIK_14450 0.88 -0.8
3,157,844 - OKGIIK_14450 0.88 -0.3
3,157,844 - OKGIIK_14450 0.88 -0.5
3,157,844 - OKGIIK_14450 0.88 -2.0
3,157,882 + -0.2
3,157,883 - -0.2
3,157,883 - -0.5
3,157,883 - -0.2
3,157,909 + +0.1
3,157,910 - -1.4
3,157,910 - -0.2
3,157,910 - +0.2
3,157,910 - +0.2
3,157,910 - +0.8
3,158,202 + -0.7
3,158,222 - -0.3
3,158,261 + -1.7
3,158,261 + +0.8
3,158,261 + -0.4
3,158,261 + +1.8
3,158,261 + +0.5
3,158,261 + -2.6
3,158,262 - -1.0
3,158,262 - +0.2
3,158,262 - +0.0
3,158,262 - +0.1

Or see this region's nucleotide sequence