Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_08555 and ccmA are separated by 61 nucleotides ccmA and ccmB are separated by 153 nucleotides ccmB and ccmC are separated by 6 nucleotides ccmC and ccmD overlap by 4 nucleotides ccmD and ccmE are separated by 18 nucleotides
OKGIIK_08555: OKGIIK_08555 - DUF3293 domain-containing protein, at 1,872,783 to 1,873,190
_08555
OKGIIK_08560: ccmA - cytochrome c biogenesis heme-transporting ATPase CcmA, at 1,873,252 to 1,873,887
ccmA
OKGIIK_08565: ccmB - heme exporter protein CcmB, at 1,874,041 to 1,874,727
ccmB
OKGIIK_08570: ccmC - heme ABC transporter permease, at 1,874,734 to 1,875,492
ccmC
OKGIIK_08575: ccmD - heme exporter protein CcmD, at 1,875,489 to 1,875,695
ccmD
OKGIIK_08580: ccmE - cytochrome c maturation protein CcmE, at 1,875,714 to 1,876,190
ccmE
Position (kb)
1874
1875 Strain fitness (log2 ratio)
-2
-1
0
1 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.140 kb on + strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.141 kb on - strand, within OKGIIK_08555 at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1873.885 kb on + strand at 1874.733 kb on + strand at 1874.733 kb on + strand at 1874.733 kb on + strand at 1874.733 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,873,140 + OKGIIK_08555 0.88 -0.9 1,873,140 + OKGIIK_08555 0.88 -0.1 1,873,140 + OKGIIK_08555 0.88 -0.7 1,873,140 + OKGIIK_08555 0.88 +0.3 1,873,140 + OKGIIK_08555 0.88 -0.9 1,873,140 + OKGIIK_08555 0.88 -0.3 1,873,140 + OKGIIK_08555 0.88 -0.8 1,873,141 - OKGIIK_08555 0.88 -0.5 1,873,141 - OKGIIK_08555 0.88 -0.9 1,873,141 - OKGIIK_08555 0.88 -1.2 1,873,141 - OKGIIK_08555 0.88 +0.0 1,873,141 - OKGIIK_08555 0.88 +0.3 1,873,141 - OKGIIK_08555 0.88 -0.3 1,873,141 - OKGIIK_08555 0.88 +0.9 1,873,141 - OKGIIK_08555 0.88 +0.3 1,873,141 - OKGIIK_08555 0.88 -1.9 1,873,141 - OKGIIK_08555 0.88 -0.9 1,873,141 - OKGIIK_08555 0.88 -1.1 1,873,885 + +1.1 1,873,885 + +0.5 1,873,885 + -0.2 1,873,885 + +0.5 1,873,885 + +1.2 1,873,885 + -0.1 1,873,885 + -0.2 1,873,885 + +0.7 1,873,885 + +1.2 1,874,733 + -1.6 1,874,733 + +0.1 1,874,733 + +1.1 1,874,733 + -0.9
Or see this region's nucleotide sequence