Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt flgG and flgH are separated by 11 nucleotides flgH and flgI are separated by 98 nucleotides flgI and flgJ are separated by 14 nucleotides
OKGIIK_02675: flgG - flagellar basal-body rod protein FlgG, at 620,987 to 621,772
flgG
OKGIIK_02680: flgH - flagellar basal body L-ring protein FlgH, at 621,784 to 622,464
flgH
OKGIIK_02685: flgI - Flagellar basal body P-ring protein FlgI, at 622,563 to 623,732
flgI
OKGIIK_02690: flgJ - flagellar assembly peptidoglycan hydrolase FlgJ, at 623,747 to 624,814
flgJ
Position (kb) 622
623
624 Strain fitness (log2 ratio) -2
-1
0
1
2 at 621.704 kb on + strand at 621.704 kb on + strand at 621.704 kb on + strand at 621.705 kb on - strand at 621.705 kb on - strand at 621.705 kb on - strand at 621.705 kb on - strand at 621.934 kb on + strand, within flgH at 621.934 kb on + strand, within flgH at 621.934 kb on + strand, within flgH at 621.934 kb on + strand, within flgH at 621.935 kb on - strand, within flgH at 622.381 kb on + strand, within flgH at 622.381 kb on + strand, within flgH at 622.382 kb on - strand, within flgH at 622.382 kb on - strand, within flgH at 622.382 kb on - strand, within flgH at 622.382 kb on - strand, within flgH at 622.382 kb on - strand, within flgH at 622.489 kb on + strand at 622.489 kb on + strand at 622.489 kb on + strand at 622.489 kb on + strand at 622.489 kb on + strand at 622.490 kb on - strand at 622.490 kb on - strand at 622.490 kb on - strand at 622.639 kb on + strand at 622.639 kb on + strand at 622.639 kb on + strand at 622.639 kb on + strand at 622.639 kb on + strand at 622.639 kb on + strand at 622.639 kb on + strand at 622.640 kb on - strand at 622.640 kb on - strand at 622.640 kb on - strand at 622.640 kb on - strand at 622.640 kb on - strand at 622.640 kb on - strand at 624.539 kb on + strand, within flgJ at 624.539 kb on + strand, within flgJ at 624.539 kb on + strand, within flgJ at 624.540 kb on - strand, within flgJ at 624.584 kb on + strand, within flgJ at 624.584 kb on + strand, within flgJ at 624.585 kb on - strand, within flgJ at 624.614 kb on + strand, within flgJ at 624.615 kb on - strand, within flgJ at 624.644 kb on + strand, within flgJ at 624.710 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.728 kb on + strand at 624.729 kb on - strand at 624.729 kb on - strand at 624.729 kb on - strand at 624.729 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 621,704 + +1.4 621,704 + -1.3 621,704 + -1.4 621,705 - +0.3 621,705 - -2.2 621,705 - +0.4 621,705 - -0.0 621,934 + flgH OKGIIK_02680 0.22 -0.3 621,934 + flgH OKGIIK_02680 0.22 -1.0 621,934 + flgH OKGIIK_02680 0.22 +0.0 621,934 + flgH OKGIIK_02680 0.22 +1.6 621,935 - flgH OKGIIK_02680 0.22 -0.4 622,381 + flgH OKGIIK_02680 0.88 -2.0 622,381 + flgH OKGIIK_02680 0.88 -0.5 622,382 - flgH OKGIIK_02680 0.88 +1.2 622,382 - flgH OKGIIK_02680 0.88 +0.0 622,382 - flgH OKGIIK_02680 0.88 +0.6 622,382 - flgH OKGIIK_02680 0.88 +0.1 622,382 - flgH OKGIIK_02680 0.88 -0.8 622,489 + -0.1 622,489 + +0.8 622,489 + -2.7 622,489 + +0.2 622,489 + -0.4 622,490 - -1.4 622,490 - -1.4 622,490 - -0.0 622,639 + -0.7 622,639 + -0.6 622,639 + +0.5 622,639 + +1.0 622,639 + -0.2 622,639 + +0.1 622,639 + -0.6 622,640 - -0.3 622,640 - -0.3 622,640 - -1.0 622,640 - +0.1 622,640 - -1.6 622,640 - +1.6 624,539 + flgJ OKGIIK_02690 0.74 +0.9 624,539 + flgJ OKGIIK_02690 0.74 -0.2 624,539 + flgJ OKGIIK_02690 0.74 -1.1 624,540 - flgJ OKGIIK_02690 0.74 +0.4 624,584 + flgJ OKGIIK_02690 0.78 -0.8 624,584 + flgJ OKGIIK_02690 0.78 -0.0 624,585 - flgJ OKGIIK_02690 0.78 +0.8 624,614 + flgJ OKGIIK_02690 0.81 -2.3 624,615 - flgJ OKGIIK_02690 0.81 +0.9 624,644 + flgJ OKGIIK_02690 0.84 -1.2 624,710 + -1.9 624,728 + -0.6 624,728 + +0.6 624,728 + +1.0 624,728 + -0.0 624,728 + +0.6 624,728 + -0.4 624,728 + +0.1 624,729 - -1.0 624,729 - -0.6 624,729 - -1.1 624,729 - +1.9
Or see this region's nucleotide sequence