Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_01635

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_01630 and OKGIIK_01635 overlap by 4 nucleotidesOKGIIK_01635 and OKGIIK_01640 overlap by 8 nucleotides OKGIIK_01630: OKGIIK_01630 - D-amino-acid oxidase, at 368,713 to 369,825 _01630 OKGIIK_01635: OKGIIK_01635 - (2Fe-2S)-binding protein, at 369,822 to 370,067 _01635 OKGIIK_01640: OKGIIK_01640 - Oxidoreductase, at 370,060 to 371,370 _01640 Position (kb) 369 370 371Strain fitness (log2 ratio) -2 -1 0 1 2at 368.903 kb on - strand, within OKGIIK_01630at 369.073 kb on + strand, within OKGIIK_01630at 369.073 kb on + strand, within OKGIIK_01630at 369.073 kb on + strand, within OKGIIK_01630at 369.073 kb on + strand, within OKGIIK_01630at 369.073 kb on + strand, within OKGIIK_01630at 369.073 kb on + strand, within OKGIIK_01630at 369.074 kb on - strand, within OKGIIK_01630at 369.074 kb on - strand, within OKGIIK_01630at 369.142 kb on + strand, within OKGIIK_01630at 369.142 kb on + strand, within OKGIIK_01630at 369.143 kb on - strand, within OKGIIK_01630at 369.332 kb on - strand, within OKGIIK_01630at 369.332 kb on - strand, within OKGIIK_01630at 369.407 kb on - strand, within OKGIIK_01630at 369.407 kb on - strand, within OKGIIK_01630at 369.407 kb on - strand, within OKGIIK_01630at 369.558 kb on + strand, within OKGIIK_01630at 369.558 kb on + strand, within OKGIIK_01630at 369.558 kb on + strand, within OKGIIK_01630at 369.558 kb on + strand, within OKGIIK_01630at 369.558 kb on + strand, within OKGIIK_01630at 369.558 kb on + strand, within OKGIIK_01630at 369.558 kb on + strand, within OKGIIK_01630at 369.558 kb on + strand, within OKGIIK_01630at 369.558 kb on + strand, within OKGIIK_01630at 369.558 kb on + strand, within OKGIIK_01630at 369.558 kb on + strand, within OKGIIK_01630at 369.559 kb on - strand, within OKGIIK_01630at 369.559 kb on - strand, within OKGIIK_01630at 369.559 kb on - strand, within OKGIIK_01630at 369.559 kb on - strand, within OKGIIK_01630at 369.559 kb on - strand, within OKGIIK_01630at 369.559 kb on - strand, within OKGIIK_01630at 369.559 kb on - strand, within OKGIIK_01630at 369.559 kb on - strand, within OKGIIK_01630at 369.559 kb on - strand, within OKGIIK_01630at 369.646 kb on + strand, within OKGIIK_01630at 369.646 kb on + strand, within OKGIIK_01630at 369.646 kb on + strand, within OKGIIK_01630at 369.647 kb on - strand, within OKGIIK_01630at 369.647 kb on - strand, within OKGIIK_01630at 369.647 kb on - strand, within OKGIIK_01630at 369.647 kb on - strand, within OKGIIK_01630at 369.647 kb on - strand, within OKGIIK_01630at 369.647 kb on - strand, within OKGIIK_01630at 369.647 kb on - strand, within OKGIIK_01630at 369.647 kb on - strand, within OKGIIK_01630at 369.787 kb on + strandat 369.788 kb on - strandat 370.082 kb on - strandat 370.082 kb on - strandat 370.357 kb on + strand, within OKGIIK_01640at 370.357 kb on + strand, within OKGIIK_01640at 370.358 kb on - strand, within OKGIIK_01640at 370.370 kb on + strand, within OKGIIK_01640at 370.371 kb on - strand, within OKGIIK_01640

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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368,903 - OKGIIK_01630 0.17 +0.6
369,073 + OKGIIK_01630 0.32 -1.2
369,073 + OKGIIK_01630 0.32 +2.0
369,073 + OKGIIK_01630 0.32 +0.2
369,073 + OKGIIK_01630 0.32 +1.6
369,073 + OKGIIK_01630 0.32 +0.6
369,073 + OKGIIK_01630 0.32 +0.0
369,074 - OKGIIK_01630 0.32 -1.0
369,074 - OKGIIK_01630 0.32 -0.0
369,142 + OKGIIK_01630 0.39 +0.8
369,142 + OKGIIK_01630 0.39 +0.4
369,143 - OKGIIK_01630 0.39 +0.6
369,332 - OKGIIK_01630 0.56 +0.5
369,332 - OKGIIK_01630 0.56 -0.2
369,407 - OKGIIK_01630 0.62 +1.2
369,407 - OKGIIK_01630 0.62 +1.2
369,407 - OKGIIK_01630 0.62 +1.4
369,558 + OKGIIK_01630 0.76 -0.8
369,558 + OKGIIK_01630 0.76 -0.2
369,558 + OKGIIK_01630 0.76 +0.9
369,558 + OKGIIK_01630 0.76 +1.4
369,558 + OKGIIK_01630 0.76 +0.3
369,558 + OKGIIK_01630 0.76 +0.5
369,558 + OKGIIK_01630 0.76 -0.2
369,558 + OKGIIK_01630 0.76 -0.2
369,558 + OKGIIK_01630 0.76 +0.7
369,558 + OKGIIK_01630 0.76 +0.0
369,558 + OKGIIK_01630 0.76 +1.0
369,559 - OKGIIK_01630 0.76 -1.2
369,559 - OKGIIK_01630 0.76 +0.4
369,559 - OKGIIK_01630 0.76 -0.4
369,559 - OKGIIK_01630 0.76 -1.0
369,559 - OKGIIK_01630 0.76 +0.6
369,559 - OKGIIK_01630 0.76 -0.6
369,559 - OKGIIK_01630 0.76 -0.6
369,559 - OKGIIK_01630 0.76 +0.9
369,559 - OKGIIK_01630 0.76 +1.1
369,646 + OKGIIK_01630 0.84 -2.4
369,646 + OKGIIK_01630 0.84 -0.9
369,646 + OKGIIK_01630 0.84 +1.4
369,647 - OKGIIK_01630 0.84 -0.6
369,647 - OKGIIK_01630 0.84 -0.2
369,647 - OKGIIK_01630 0.84 +1.0
369,647 - OKGIIK_01630 0.84 +0.4
369,647 - OKGIIK_01630 0.84 +0.5
369,647 - OKGIIK_01630 0.84 -1.6
369,647 - OKGIIK_01630 0.84 +0.2
369,647 - OKGIIK_01630 0.84 -0.1
369,787 + -0.5
369,788 - +0.6
370,082 - +0.1
370,082 - -0.0
370,357 + OKGIIK_01640 0.23 +0.6
370,357 + OKGIIK_01640 0.23 +2.0
370,358 - OKGIIK_01640 0.23 +1.0
370,370 + OKGIIK_01640 0.24 +1.1
370,371 - OKGIIK_01640 0.24 +0.8

Or see this region's nucleotide sequence