Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_01570 and OKGIIK_01575 are separated by 225 nucleotides OKGIIK_01575 and OKGIIK_01580 are separated by 95 nucleotides OKGIIK_01580 and yceI are separated by 9 nucleotides yceI and OKGIIK_01590 overlap by 1 nucleotides
OKGIIK_01570: OKGIIK_01570 - NrdH-redoxin, at 357,622 to 357,852
_01570
OKGIIK_01575: OKGIIK_01575 - hypothetical protein, at 358,078 to 358,650
_01575
OKGIIK_01580: OKGIIK_01580 - GTP-binding protein HSR1, at 358,746 to 360,110
_01580
OKGIIK_01585: yceI - polyisoprenoid-binding protein, at 360,120 to 360,668
yceI
OKGIIK_01590: OKGIIK_01590 - cytochrome B, at 360,668 to 361,246
_01590
Position (kb) 358
359
360
361 Strain fitness (log2 ratio) -2
-1
0
1
2 at 357.754 kb on + strand, within OKGIIK_01570 at 357.850 kb on + strand at 357.850 kb on + strand at 357.850 kb on + strand at 357.850 kb on + strand at 357.851 kb on - strand at 357.851 kb on - strand at 357.851 kb on - strand at 357.851 kb on - strand at 357.851 kb on - strand at 357.851 kb on - strand at 357.851 kb on - strand at 357.851 kb on - strand at 357.859 kb on + strand at 358.091 kb on + strand at 358.091 kb on + strand at 358.091 kb on + strand at 358.092 kb on - strand at 358.092 kb on - strand at 358.328 kb on + strand, within OKGIIK_01575 at 358.328 kb on + strand, within OKGIIK_01575 at 358.328 kb on + strand, within OKGIIK_01575 at 358.328 kb on + strand, within OKGIIK_01575 at 358.329 kb on - strand, within OKGIIK_01575 at 358.329 kb on - strand, within OKGIIK_01575 at 358.329 kb on - strand, within OKGIIK_01575 at 358.424 kb on + strand, within OKGIIK_01575 at 358.425 kb on - strand, within OKGIIK_01575 at 358.425 kb on - strand, within OKGIIK_01575 at 358.425 kb on - strand, within OKGIIK_01575 at 358.425 kb on - strand, within OKGIIK_01575 at 358.427 kb on + strand, within OKGIIK_01575 at 358.427 kb on + strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.428 kb on - strand, within OKGIIK_01575 at 358.514 kb on + strand, within OKGIIK_01575 at 358.514 kb on + strand, within OKGIIK_01575 at 358.514 kb on + strand, within OKGIIK_01575 at 358.514 kb on + strand, within OKGIIK_01575 at 358.514 kb on + strand, within OKGIIK_01575 at 358.514 kb on + strand, within OKGIIK_01575 at 358.514 kb on + strand, within OKGIIK_01575 at 358.514 kb on + strand, within OKGIIK_01575 at 358.514 kb on + strand, within OKGIIK_01575 at 358.515 kb on - strand, within OKGIIK_01575 at 358.515 kb on - strand, within OKGIIK_01575 at 358.515 kb on - strand, within OKGIIK_01575 at 358.515 kb on - strand, within OKGIIK_01575 at 358.515 kb on - strand, within OKGIIK_01575 at 358.515 kb on - strand, within OKGIIK_01575 at 358.515 kb on - strand, within OKGIIK_01575 at 358.689 kb on + strand at 358.715 kb on + strand at 358.716 kb on - strand at 358.716 kb on - strand at 358.729 kb on + strand at 358.729 kb on + strand at 358.730 kb on - strand at 358.730 kb on - strand at 358.730 kb on - strand at 358.730 kb on - strand at 358.730 kb on - strand at 358.730 kb on - strand at 358.730 kb on - strand at 358.730 kb on - strand at 358.739 kb on + strand at 358.739 kb on + strand at 358.892 kb on - strand, within OKGIIK_01580 at 358.892 kb on - strand, within OKGIIK_01580 at 358.892 kb on - strand, within OKGIIK_01580 at 358.928 kb on - strand, within OKGIIK_01580 at 359.105 kb on - strand, within OKGIIK_01580 at 359.105 kb on - strand, within OKGIIK_01580 at 359.105 kb on - strand, within OKGIIK_01580 at 359.121 kb on + strand, within OKGIIK_01580 at 359.121 kb on + strand, within OKGIIK_01580 at 359.121 kb on + strand, within OKGIIK_01580 at 359.121 kb on + strand, within OKGIIK_01580 at 359.121 kb on + strand, within OKGIIK_01580 at 359.121 kb on + strand, within OKGIIK_01580 at 359.121 kb on + strand, within OKGIIK_01580 at 359.121 kb on + strand, within OKGIIK_01580 at 359.121 kb on + strand, within OKGIIK_01580 at 359.121 kb on + strand, within OKGIIK_01580 at 359.121 kb on + strand, within OKGIIK_01580 at 359.122 kb on - strand, within OKGIIK_01580 at 359.122 kb on - strand, within OKGIIK_01580 at 359.122 kb on - strand, within OKGIIK_01580 at 359.122 kb on - strand, within OKGIIK_01580 at 359.122 kb on - strand, within OKGIIK_01580 at 359.122 kb on - strand, within OKGIIK_01580 at 359.122 kb on - strand, within OKGIIK_01580 at 359.122 kb on - strand, within OKGIIK_01580 at 359.122 kb on - strand, within OKGIIK_01580 at 359.122 kb on - strand, within OKGIIK_01580 at 359.122 kb on - strand, within OKGIIK_01580 at 359.212 kb on + strand, within OKGIIK_01580 at 359.212 kb on + strand, within OKGIIK_01580 at 359.213 kb on - strand, within OKGIIK_01580 at 359.213 kb on - strand, within OKGIIK_01580 at 359.213 kb on - strand, within OKGIIK_01580 at 359.213 kb on - strand, within OKGIIK_01580 at 359.223 kb on - strand, within OKGIIK_01580 at 359.293 kb on + strand, within OKGIIK_01580 at 359.293 kb on + strand, within OKGIIK_01580 at 359.294 kb on - strand, within OKGIIK_01580 at 359.294 kb on - strand, within OKGIIK_01580 at 359.542 kb on + strand, within OKGIIK_01580 at 359.542 kb on + strand, within OKGIIK_01580 at 359.791 kb on + strand, within OKGIIK_01580 at 360.122 kb on - strand at 360.188 kb on - strand, within yceI at 360.505 kb on + strand, within yceI at 360.505 kb on + strand, within yceI at 360.506 kb on - strand, within yceI at 360.506 kb on - strand, within yceI at 360.506 kb on - strand, within yceI at 360.506 kb on - strand, within yceI at 360.506 kb on - strand, within yceI at 360.506 kb on - strand, within yceI at 360.576 kb on + strand, within yceI at 360.576 kb on + strand, within yceI at 360.576 kb on + strand, within yceI at 360.576 kb on + strand, within yceI at 360.576 kb on + strand, within yceI at 360.577 kb on - strand, within yceI at 360.577 kb on - strand, within yceI at 360.577 kb on - strand, within yceI at 360.577 kb on - strand, within yceI at 360.604 kb on + strand, within yceI at 360.604 kb on + strand, within yceI at 360.604 kb on + strand, within yceI at 360.604 kb on + strand, within yceI at 360.605 kb on - strand, within yceI at 360.605 kb on - strand, within yceI at 360.605 kb on - strand, within yceI at 360.605 kb on - strand, within yceI at 360.605 kb on - strand, within yceI at 360.605 kb on - strand, within yceI at 360.605 kb on - strand, within yceI at 360.814 kb on - strand, within OKGIIK_01590 at 360.814 kb on - strand, within OKGIIK_01590 at 360.814 kb on - strand, within OKGIIK_01590 at 360.814 kb on - strand, within OKGIIK_01590 at 360.814 kb on - strand, within OKGIIK_01590 at 360.814 kb on - strand, within OKGIIK_01590 at 360.814 kb on - strand, within OKGIIK_01590 at 360.960 kb on + strand, within OKGIIK_01590 at 360.960 kb on + strand, within OKGIIK_01590 at 360.960 kb on + strand, within OKGIIK_01590 at 360.960 kb on + strand, within OKGIIK_01590 at 360.960 kb on + strand, within OKGIIK_01590 at 360.960 kb on + strand, within OKGIIK_01590 at 360.960 kb on + strand, within OKGIIK_01590 at 360.960 kb on + strand, within OKGIIK_01590 at 360.960 kb on + strand, within OKGIIK_01590 at 360.960 kb on + strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590 at 360.961 kb on - strand, within OKGIIK_01590
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 357,754 + OKGIIK_01570 0.57 -0.2 357,850 + -0.5 357,850 + +1.0 357,850 + -0.6 357,850 + -1.4 357,851 - -1.4 357,851 - +1.8 357,851 - +0.9 357,851 - +0.1 357,851 - +0.9 357,851 - +1.1 357,851 - +0.5 357,851 - -0.1 357,859 + -0.8 358,091 + -0.3 358,091 + +0.9 358,091 + -0.6 358,092 - -0.2 358,092 - +0.2 358,328 + OKGIIK_01575 0.44 -1.0 358,328 + OKGIIK_01575 0.44 -0.7 358,328 + OKGIIK_01575 0.44 -1.2 358,328 + OKGIIK_01575 0.44 -1.6 358,329 - OKGIIK_01575 0.44 +1.1 358,329 - OKGIIK_01575 0.44 -1.0 358,329 - OKGIIK_01575 0.44 +0.8 358,424 + OKGIIK_01575 0.60 +0.2 358,425 - OKGIIK_01575 0.61 +0.4 358,425 - OKGIIK_01575 0.61 +0.4 358,425 - OKGIIK_01575 0.61 -1.2 358,425 - OKGIIK_01575 0.61 +1.4 358,427 + OKGIIK_01575 0.61 +0.5 358,427 + OKGIIK_01575 0.61 -0.2 358,428 - OKGIIK_01575 0.61 -0.6 358,428 - OKGIIK_01575 0.61 -0.6 358,428 - OKGIIK_01575 0.61 +1.4 358,428 - OKGIIK_01575 0.61 +0.7 358,428 - OKGIIK_01575 0.61 -0.5 358,428 - OKGIIK_01575 0.61 -0.2 358,428 - OKGIIK_01575 0.61 +0.1 358,428 - OKGIIK_01575 0.61 -1.8 358,428 - OKGIIK_01575 0.61 -0.1 358,428 - OKGIIK_01575 0.61 +1.3 358,428 - OKGIIK_01575 0.61 -0.8 358,428 - OKGIIK_01575 0.61 -0.5 358,514 + OKGIIK_01575 0.76 +1.0 358,514 + OKGIIK_01575 0.76 -0.0 358,514 + OKGIIK_01575 0.76 +0.9 358,514 + OKGIIK_01575 0.76 +0.8 358,514 + OKGIIK_01575 0.76 +1.1 358,514 + OKGIIK_01575 0.76 +0.1 358,514 + OKGIIK_01575 0.76 -0.1 358,514 + OKGIIK_01575 0.76 +0.7 358,514 + OKGIIK_01575 0.76 -0.8 358,515 - OKGIIK_01575 0.76 +0.0 358,515 - OKGIIK_01575 0.76 -1.6 358,515 - OKGIIK_01575 0.76 -1.2 358,515 - OKGIIK_01575 0.76 +0.7 358,515 - OKGIIK_01575 0.76 -0.1 358,515 - OKGIIK_01575 0.76 -0.0 358,515 - OKGIIK_01575 0.76 +0.1 358,689 + +0.7 358,715 + +0.3 358,716 - +0.9 358,716 - -0.1 358,729 + +0.1 358,729 + -2.5 358,730 - +0.2 358,730 - +0.9 358,730 - -0.5 358,730 - -0.0 358,730 - -0.6 358,730 - +1.2 358,730 - -1.4 358,730 - -1.2 358,739 + +0.1 358,739 + +1.1 358,892 - OKGIIK_01580 0.11 -0.1 358,892 - OKGIIK_01580 0.11 -0.8 358,892 - OKGIIK_01580 0.11 -0.2 358,928 - OKGIIK_01580 0.13 +0.7 359,105 - OKGIIK_01580 0.26 -0.6 359,105 - OKGIIK_01580 0.26 +2.4 359,105 - OKGIIK_01580 0.26 +0.2 359,121 + OKGIIK_01580 0.27 +0.7 359,121 + OKGIIK_01580 0.27 -0.4 359,121 + OKGIIK_01580 0.27 +0.4 359,121 + OKGIIK_01580 0.27 +0.3 359,121 + OKGIIK_01580 0.27 -1.6 359,121 + OKGIIK_01580 0.27 -0.3 359,121 + OKGIIK_01580 0.27 -0.6 359,121 + OKGIIK_01580 0.27 -0.3 359,121 + OKGIIK_01580 0.27 -1.1 359,121 + OKGIIK_01580 0.27 -1.6 359,121 + OKGIIK_01580 0.27 +0.6 359,122 - OKGIIK_01580 0.28 -0.3 359,122 - OKGIIK_01580 0.28 -2.4 359,122 - OKGIIK_01580 0.28 -1.4 359,122 - OKGIIK_01580 0.28 +1.4 359,122 - OKGIIK_01580 0.28 -1.8 359,122 - OKGIIK_01580 0.28 +0.5 359,122 - OKGIIK_01580 0.28 -0.0 359,122 - OKGIIK_01580 0.28 +1.4 359,122 - OKGIIK_01580 0.28 +0.9 359,122 - OKGIIK_01580 0.28 -1.4 359,122 - OKGIIK_01580 0.28 +0.5 359,212 + OKGIIK_01580 0.34 -0.0 359,212 + OKGIIK_01580 0.34 +2.0 359,213 - OKGIIK_01580 0.34 -0.7 359,213 - OKGIIK_01580 0.34 -0.6 359,213 - OKGIIK_01580 0.34 +0.4 359,213 - OKGIIK_01580 0.34 -0.3 359,223 - OKGIIK_01580 0.35 +0.4 359,293 + OKGIIK_01580 0.40 +0.9 359,293 + OKGIIK_01580 0.40 +0.5 359,294 - OKGIIK_01580 0.40 -0.2 359,294 - OKGIIK_01580 0.40 +0.6 359,542 + OKGIIK_01580 0.58 -1.0 359,542 + OKGIIK_01580 0.58 -0.2 359,791 + OKGIIK_01580 0.77 +0.6 360,122 - -0.1 360,188 - yceI OKGIIK_01585 0.12 +1.4 360,505 + yceI OKGIIK_01585 0.70 +0.4 360,505 + yceI OKGIIK_01585 0.70 -0.9 360,506 - yceI OKGIIK_01585 0.70 +0.5 360,506 - yceI OKGIIK_01585 0.70 -1.2 360,506 - yceI OKGIIK_01585 0.70 -0.8 360,506 - yceI OKGIIK_01585 0.70 -2.6 360,506 - yceI OKGIIK_01585 0.70 -0.4 360,506 - yceI OKGIIK_01585 0.70 -1.0 360,576 + yceI OKGIIK_01585 0.83 -1.4 360,576 + yceI OKGIIK_01585 0.83 +0.4 360,576 + yceI OKGIIK_01585 0.83 +0.9 360,576 + yceI OKGIIK_01585 0.83 -0.1 360,576 + yceI OKGIIK_01585 0.83 +0.4 360,577 - yceI OKGIIK_01585 0.83 -0.4 360,577 - yceI OKGIIK_01585 0.83 +1.2 360,577 - yceI OKGIIK_01585 0.83 +1.6 360,577 - yceI OKGIIK_01585 0.83 -1.0 360,604 + yceI OKGIIK_01585 0.88 -1.6 360,604 + yceI OKGIIK_01585 0.88 +0.2 360,604 + yceI OKGIIK_01585 0.88 -1.8 360,604 + yceI OKGIIK_01585 0.88 -0.5 360,605 - yceI OKGIIK_01585 0.88 -1.0 360,605 - yceI OKGIIK_01585 0.88 +0.4 360,605 - yceI OKGIIK_01585 0.88 +1.8 360,605 - yceI OKGIIK_01585 0.88 +1.0 360,605 - yceI OKGIIK_01585 0.88 +0.1 360,605 - yceI OKGIIK_01585 0.88 -1.9 360,605 - yceI OKGIIK_01585 0.88 +0.4 360,814 - OKGIIK_01590 0.25 -1.2 360,814 - OKGIIK_01590 0.25 -1.5 360,814 - OKGIIK_01590 0.25 +0.2 360,814 - OKGIIK_01590 0.25 +0.5 360,814 - OKGIIK_01590 0.25 -0.1 360,814 - OKGIIK_01590 0.25 -0.2 360,814 - OKGIIK_01590 0.25 -2.5 360,960 + OKGIIK_01590 0.50 -1.0 360,960 + OKGIIK_01590 0.50 +0.4 360,960 + OKGIIK_01590 0.50 -0.4 360,960 + OKGIIK_01590 0.50 -0.5 360,960 + OKGIIK_01590 0.50 +1.0 360,960 + OKGIIK_01590 0.50 +0.2 360,960 + OKGIIK_01590 0.50 +0.4 360,960 + OKGIIK_01590 0.50 -0.4 360,960 + OKGIIK_01590 0.50 +0.4 360,960 + OKGIIK_01590 0.50 +0.9 360,961 - OKGIIK_01590 0.51 +0.4 360,961 - OKGIIK_01590 0.51 -1.1 360,961 - OKGIIK_01590 0.51 +0.1 360,961 - OKGIIK_01590 0.51 +0.3 360,961 - OKGIIK_01590 0.51 +0.6 360,961 - OKGIIK_01590 0.51 -0.4 360,961 - OKGIIK_01590 0.51 +0.8 360,961 - OKGIIK_01590 0.51 -0.2 360,961 - OKGIIK_01590 0.51 +1.1 360,961 - OKGIIK_01590 0.51 -1.4 360,961 - OKGIIK_01590 0.51 -0.5 360,961 - OKGIIK_01590 0.51 +1.0 360,961 - OKGIIK_01590 0.51 -0.9 360,961 - OKGIIK_01590 0.51 -0.5
Or see this region's nucleotide sequence