Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_01425 and prfC are separated by 51 nucleotides prfC and OKGIIK_01435 are separated by 89 nucleotides
OKGIIK_01425: OKGIIK_01425 - Abortive infection protein, at 318,375 to 319,274
_01425
OKGIIK_01430: prfC - peptide chain release factor 3, at 319,326 to 320,927
prfC
OKGIIK_01435: OKGIIK_01435 - hypothetical protein, at 321,017 to 321,784
_01435
Position (kb) 319
320
321 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 318.341 kb on + strand at 318.341 kb on + strand at 318.341 kb on + strand at 318.341 kb on + strand at 318.342 kb on - strand at 318.342 kb on - strand at 318.342 kb on - strand at 318.342 kb on - strand at 318.342 kb on - strand at 318.342 kb on - strand at 318.342 kb on - strand at 318.342 kb on - strand at 318.342 kb on - strand at 318.342 kb on - strand at 318.449 kb on + strand at 318.449 kb on + strand at 318.449 kb on + strand at 318.449 kb on + strand at 318.449 kb on + strand at 318.449 kb on + strand at 318.449 kb on + strand at 318.449 kb on + strand at 318.449 kb on + strand at 318.449 kb on + strand at 318.449 kb on + strand at 318.450 kb on - strand at 318.450 kb on - strand at 318.450 kb on - strand at 318.450 kb on - strand at 318.450 kb on - strand at 318.450 kb on - strand at 318.450 kb on - strand at 318.450 kb on - strand at 318.450 kb on - strand at 318.450 kb on - strand at 318.571 kb on + strand, within OKGIIK_01425 at 318.571 kb on + strand, within OKGIIK_01425 at 318.571 kb on + strand, within OKGIIK_01425 at 318.571 kb on + strand, within OKGIIK_01425 at 318.571 kb on + strand, within OKGIIK_01425 at 318.571 kb on + strand, within OKGIIK_01425 at 318.571 kb on + strand, within OKGIIK_01425 at 318.572 kb on - strand, within OKGIIK_01425 at 318.572 kb on - strand, within OKGIIK_01425 at 318.572 kb on - strand, within OKGIIK_01425 at 318.572 kb on - strand, within OKGIIK_01425 at 318.572 kb on - strand, within OKGIIK_01425 at 318.572 kb on - strand, within OKGIIK_01425 at 318.572 kb on - strand, within OKGIIK_01425 at 318.572 kb on - strand, within OKGIIK_01425 at 318.572 kb on - strand, within OKGIIK_01425 at 318.643 kb on + strand, within OKGIIK_01425 at 318.643 kb on + strand, within OKGIIK_01425 at 318.643 kb on + strand, within OKGIIK_01425 at 318.643 kb on + strand, within OKGIIK_01425 at 318.643 kb on + strand, within OKGIIK_01425 at 318.644 kb on - strand, within OKGIIK_01425 at 318.644 kb on - strand, within OKGIIK_01425 at 318.898 kb on + strand, within OKGIIK_01425 at 318.898 kb on + strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.899 kb on - strand, within OKGIIK_01425 at 318.913 kb on + strand, within OKGIIK_01425 at 318.914 kb on - strand, within OKGIIK_01425 at 318.914 kb on - strand, within OKGIIK_01425 at 318.914 kb on - strand, within OKGIIK_01425 at 318.914 kb on - strand, within OKGIIK_01425 at 318.914 kb on - strand, within OKGIIK_01425 at 318.914 kb on - strand, within OKGIIK_01425 at 318.914 kb on - strand, within OKGIIK_01425 at 318.914 kb on - strand, within OKGIIK_01425 at 318.914 kb on - strand, within OKGIIK_01425 at 319.029 kb on + strand, within OKGIIK_01425 at 319.042 kb on + strand, within OKGIIK_01425 at 319.042 kb on + strand, within OKGIIK_01425 at 319.042 kb on + strand, within OKGIIK_01425 at 319.042 kb on + strand, within OKGIIK_01425 at 319.042 kb on + strand, within OKGIIK_01425 at 319.042 kb on + strand, within OKGIIK_01425 at 319.042 kb on + strand, within OKGIIK_01425 at 319.042 kb on + strand, within OKGIIK_01425 at 319.305 kb on - strand at 319.305 kb on - strand at 319.327 kb on + strand at 319.327 kb on + strand at 319.328 kb on - strand at 319.328 kb on - strand at 319.328 kb on - strand at 319.328 kb on - strand at 319.328 kb on - strand at 319.328 kb on - strand at 319.328 kb on - strand at 320.958 kb on - strand at 320.958 kb on - strand at 320.958 kb on - strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 321.056 kb on + strand at 321.057 kb on - strand at 321.057 kb on - strand at 321.107 kb on - strand, within OKGIIK_01435 at 321.107 kb on - strand, within OKGIIK_01435 at 321.107 kb on - strand, within OKGIIK_01435 at 321.107 kb on - strand, within OKGIIK_01435 at 321.139 kb on - strand, within OKGIIK_01435 at 321.175 kb on + strand, within OKGIIK_01435 at 321.175 kb on + strand, within OKGIIK_01435 at 321.207 kb on + strand, within OKGIIK_01435 at 321.207 kb on + strand, within OKGIIK_01435 at 321.207 kb on + strand, within OKGIIK_01435 at 321.208 kb on - strand, within OKGIIK_01435 at 321.249 kb on - strand, within OKGIIK_01435 at 321.325 kb on + strand, within OKGIIK_01435 at 321.326 kb on - strand, within OKGIIK_01435 at 321.326 kb on - strand, within OKGIIK_01435 at 321.330 kb on - strand, within OKGIIK_01435 at 321.330 kb on - strand, within OKGIIK_01435 at 321.344 kb on + strand, within OKGIIK_01435 at 321.345 kb on - strand, within OKGIIK_01435 at 321.350 kb on + strand, within OKGIIK_01435 at 321.350 kb on + strand, within OKGIIK_01435 at 321.350 kb on + strand, within OKGIIK_01435 at 321.351 kb on - strand, within OKGIIK_01435 at 321.351 kb on - strand, within OKGIIK_01435 at 321.530 kb on - strand, within OKGIIK_01435 at 321.530 kb on - strand, within OKGIIK_01435 at 321.573 kb on - strand, within OKGIIK_01435 at 321.648 kb on + strand, within OKGIIK_01435 at 321.649 kb on - strand, within OKGIIK_01435 at 321.649 kb on - strand, within OKGIIK_01435 at 321.649 kb on - strand, within OKGIIK_01435 at 321.649 kb on - strand, within OKGIIK_01435 at 321.649 kb on - strand, within OKGIIK_01435 at 321.649 kb on - strand, within OKGIIK_01435 at 321.649 kb on - strand, within OKGIIK_01435 at 321.652 kb on + strand, within OKGIIK_01435 at 321.652 kb on + strand, within OKGIIK_01435 at 321.652 kb on + strand, within OKGIIK_01435 at 321.652 kb on + strand, within OKGIIK_01435 at 321.652 kb on + strand, within OKGIIK_01435 at 321.653 kb on - strand, within OKGIIK_01435 at 321.653 kb on - strand, within OKGIIK_01435 at 321.653 kb on - strand, within OKGIIK_01435 at 321.653 kb on - strand, within OKGIIK_01435 at 321.653 kb on - strand, within OKGIIK_01435 at 321.653 kb on - strand, within OKGIIK_01435 at 321.653 kb on - strand, within OKGIIK_01435 at 321.653 kb on - strand, within OKGIIK_01435 at 321.683 kb on + strand, within OKGIIK_01435 at 321.772 kb on + strand at 321.773 kb on - strand at 321.773 kb on - strand at 321.776 kb on + strand at 321.784 kb on + strand at 321.784 kb on + strand at 321.785 kb on - strand at 321.813 kb on - strand at 321.818 kb on + strand at 321.871 kb on + strand at 321.871 kb on + strand at 321.871 kb on + strand at 321.872 kb on - strand at 321.872 kb on - strand at 321.897 kb on + strand at 321.897 kb on + strand at 321.897 kb on + strand at 321.898 kb on - strand at 321.904 kb on - strand at 321.904 kb on - strand at 321.927 kb on + strand at 321.927 kb on + strand at 321.927 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 318,341 + +0.0 318,341 + -1.8 318,341 + -0.4 318,341 + +0.4 318,342 - +0.4 318,342 - -1.7 318,342 - -0.3 318,342 - -0.3 318,342 - -0.4 318,342 - -0.8 318,342 - -0.7 318,342 - +0.6 318,342 - +0.7 318,342 - -0.3 318,449 + -0.7 318,449 + -0.7 318,449 + -0.6 318,449 + -0.7 318,449 + -0.6 318,449 + +0.5 318,449 + -0.7 318,449 + +0.8 318,449 + +0.0 318,449 + +0.4 318,449 + +0.4 318,450 - -1.2 318,450 - -0.3 318,450 - +0.1 318,450 - -0.4 318,450 - -0.1 318,450 - +0.8 318,450 - +0.5 318,450 - +0.7 318,450 - +0.0 318,450 - -1.7 318,571 + OKGIIK_01425 0.22 -0.3 318,571 + OKGIIK_01425 0.22 +1.0 318,571 + OKGIIK_01425 0.22 +0.5 318,571 + OKGIIK_01425 0.22 +0.1 318,571 + OKGIIK_01425 0.22 +0.9 318,571 + OKGIIK_01425 0.22 -1.5 318,571 + OKGIIK_01425 0.22 -0.4 318,572 - OKGIIK_01425 0.22 -0.5 318,572 - OKGIIK_01425 0.22 +1.1 318,572 - OKGIIK_01425 0.22 -1.9 318,572 - OKGIIK_01425 0.22 +2.1 318,572 - OKGIIK_01425 0.22 +0.2 318,572 - OKGIIK_01425 0.22 +0.4 318,572 - OKGIIK_01425 0.22 -1.8 318,572 - OKGIIK_01425 0.22 +1.3 318,572 - OKGIIK_01425 0.22 +0.1 318,643 + OKGIIK_01425 0.30 -0.1 318,643 + OKGIIK_01425 0.30 -0.7 318,643 + OKGIIK_01425 0.30 +0.1 318,643 + OKGIIK_01425 0.30 +0.7 318,643 + OKGIIK_01425 0.30 +0.3 318,644 - OKGIIK_01425 0.30 -1.3 318,644 - OKGIIK_01425 0.30 -1.0 318,898 + OKGIIK_01425 0.58 +0.1 318,898 + OKGIIK_01425 0.58 -2.7 318,899 - OKGIIK_01425 0.58 -1.0 318,899 - OKGIIK_01425 0.58 -0.6 318,899 - OKGIIK_01425 0.58 -1.0 318,899 - OKGIIK_01425 0.58 -0.3 318,899 - OKGIIK_01425 0.58 -1.4 318,899 - OKGIIK_01425 0.58 +0.0 318,899 - OKGIIK_01425 0.58 -1.0 318,899 - OKGIIK_01425 0.58 -1.3 318,899 - OKGIIK_01425 0.58 +0.4 318,899 - OKGIIK_01425 0.58 +0.0 318,899 - OKGIIK_01425 0.58 -0.5 318,899 - OKGIIK_01425 0.58 -0.5 318,899 - OKGIIK_01425 0.58 -1.1 318,899 - OKGIIK_01425 0.58 -0.5 318,899 - OKGIIK_01425 0.58 +0.0 318,899 - OKGIIK_01425 0.58 +1.7 318,899 - OKGIIK_01425 0.58 +0.6 318,913 + OKGIIK_01425 0.60 -0.2 318,914 - OKGIIK_01425 0.60 -0.7 318,914 - OKGIIK_01425 0.60 -0.7 318,914 - OKGIIK_01425 0.60 -0.5 318,914 - OKGIIK_01425 0.60 -0.9 318,914 - OKGIIK_01425 0.60 -0.7 318,914 - OKGIIK_01425 0.60 -1.7 318,914 - OKGIIK_01425 0.60 -0.8 318,914 - OKGIIK_01425 0.60 +0.5 318,914 - OKGIIK_01425 0.60 -0.3 319,029 + OKGIIK_01425 0.73 +0.2 319,042 + OKGIIK_01425 0.74 -0.1 319,042 + OKGIIK_01425 0.74 +0.0 319,042 + OKGIIK_01425 0.74 +0.2 319,042 + OKGIIK_01425 0.74 -0.3 319,042 + OKGIIK_01425 0.74 +0.1 319,042 + OKGIIK_01425 0.74 +0.1 319,042 + OKGIIK_01425 0.74 -1.3 319,042 + OKGIIK_01425 0.74 -1.0 319,305 - +0.3 319,305 - -1.3 319,327 + +0.0 319,327 + +0.3 319,328 - +0.4 319,328 - -0.3 319,328 - +0.7 319,328 - -1.5 319,328 - +0.3 319,328 - -0.8 319,328 - +0.4 320,958 - -0.3 320,958 - +0.2 320,958 - -0.8 320,963 + -1.5 320,963 + -0.1 320,963 + +0.2 320,964 - -2.9 320,964 - -1.7 320,964 - +0.3 321,056 + -0.7 321,057 - -2.8 321,057 - +1.0 321,107 - OKGIIK_01435 0.12 +0.3 321,107 - OKGIIK_01435 0.12 +2.5 321,107 - OKGIIK_01435 0.12 -0.8 321,107 - OKGIIK_01435 0.12 +0.9 321,139 - OKGIIK_01435 0.16 -1.0 321,175 + OKGIIK_01435 0.21 -0.5 321,175 + OKGIIK_01435 0.21 -0.6 321,207 + OKGIIK_01435 0.25 -0.3 321,207 + OKGIIK_01435 0.25 -1.0 321,207 + OKGIIK_01435 0.25 +0.1 321,208 - OKGIIK_01435 0.25 +0.1 321,249 - OKGIIK_01435 0.30 -1.0 321,325 + OKGIIK_01435 0.40 -2.8 321,326 - OKGIIK_01435 0.40 +0.0 321,326 - OKGIIK_01435 0.40 -1.8 321,330 - OKGIIK_01435 0.41 +0.3 321,330 - OKGIIK_01435 0.41 +1.3 321,344 + OKGIIK_01435 0.43 -1.1 321,345 - OKGIIK_01435 0.43 -0.9 321,350 + OKGIIK_01435 0.43 -1.5 321,350 + OKGIIK_01435 0.43 -0.2 321,350 + OKGIIK_01435 0.43 +1.3 321,351 - OKGIIK_01435 0.43 -1.3 321,351 - OKGIIK_01435 0.43 -0.7 321,530 - OKGIIK_01435 0.67 +1.8 321,530 - OKGIIK_01435 0.67 -1.1 321,573 - OKGIIK_01435 0.72 +1.1 321,648 + OKGIIK_01435 0.82 -0.2 321,649 - OKGIIK_01435 0.82 -1.3 321,649 - OKGIIK_01435 0.82 -2.6 321,649 - OKGIIK_01435 0.82 -0.7 321,649 - OKGIIK_01435 0.82 -2.4 321,649 - OKGIIK_01435 0.82 +1.3 321,649 - OKGIIK_01435 0.82 -0.1 321,649 - OKGIIK_01435 0.82 -0.4 321,652 + OKGIIK_01435 0.83 -0.3 321,652 + OKGIIK_01435 0.83 -0.7 321,652 + OKGIIK_01435 0.83 -0.8 321,652 + OKGIIK_01435 0.83 -1.7 321,652 + OKGIIK_01435 0.83 -1.1 321,653 - OKGIIK_01435 0.83 +0.3 321,653 - OKGIIK_01435 0.83 +0.3 321,653 - OKGIIK_01435 0.83 -1.3 321,653 - OKGIIK_01435 0.83 -1.3 321,653 - OKGIIK_01435 0.83 -1.4 321,653 - OKGIIK_01435 0.83 -1.0 321,653 - OKGIIK_01435 0.83 -1.0 321,653 - OKGIIK_01435 0.83 +0.1 321,683 + OKGIIK_01435 0.87 +0.1 321,772 + +0.5 321,773 - -0.2 321,773 - -1.0 321,776 + +1.6 321,784 + +0.3 321,784 + -0.5 321,785 - -0.0 321,813 - -0.9 321,818 + +0.3 321,871 + +0.2 321,871 + -0.7 321,871 + -1.2 321,872 - -0.1 321,872 - -0.5 321,897 + -1.0 321,897 + -0.3 321,897 + -1.0 321,898 - -0.5 321,904 - +0.1 321,904 - +0.9 321,927 + -0.7 321,927 + -2.0 321,927 + -0.0
Or see this region's nucleotide sequence