Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15840

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
3,461,688	+	nudC	OKGIIK_15830	0.60	-0.8
3,461,689	-	nudC	OKGIIK_15830	0.60	-1.0
3,461,689	-	nudC	OKGIIK_15830	0.60	-0.3
3,461,826	+	nudC	OKGIIK_15830	0.74	+0.9
3,461,827	-	nudC	OKGIIK_15830	0.74	+1.0
3,461,827	-	nudC	OKGIIK_15830	0.74	-0.9
3,461,827	-	nudC	OKGIIK_15830	0.74	+1.1
3,461,827	-	nudC	OKGIIK_15830	0.74	+0.7
3,461,827	-	nudC	OKGIIK_15830	0.74	+2.2
3,461,952	+	nudC	OKGIIK_15830	0.87	+0.2
3,461,952	+	nudC	OKGIIK_15830	0.87	-0.9
3,461,953	-	nudC	OKGIIK_15830	0.87	+0.7
3,461,953	-	nudC	OKGIIK_15830	0.87	-1.4
3,461,953	-	nudC	OKGIIK_15830	0.87	-0.6
3,462,499	+				-0.6
3,462,499	+				-1.7
3,462,499	+				-0.1
3,462,499	+				-1.4
3,462,499	+				-0.1
3,462,500	-				+1.0
3,462,500	-				+0.4
3,462,500	-				+0.0
3,462,500	-				+0.4
3,462,627	+		OKGIIK_15840	0.28	-0.9
3,462,898	+				+0.6
3,462,898	+				+1.0
3,462,899	-				-0.2
3,462,919	+				-0.3
3,462,919	+				+0.7
3,462,919	+				+1.0
3,462,919	+				+0.6
3,462,919	+				-0.1
3,462,919	+				+0.4
3,462,919	+				+0.7
3,462,919	+				-1.9
3,462,920	-				+1.0
3,462,920	-				-0.9
3,462,920	-				-0.0
3,462,920	-				+1.7
3,462,925	+				-1.7
3,462,925	+				+1.1
3,462,925	+				-0.2
3,462,949	-				+0.1
3,462,953	+				+0.8
3,462,953	+				+0.9
3,462,953	+				+0.8
3,462,953	+				+0.9
3,462,953	+				+0.1
3,462,954	-				-0.1
3,462,954	-				+0.3
3,462,954	-				-1.4
3,462,954	-				+1.4
3,462,954	-				-0.6
3,462,954	-				-0.3
3,462,954	-				+0.7
3,462,954	-				+0.9
3,462,954	-				+0.8
3,462,955	+				+0.9
3,462,956	+				+0.9
3,462,956	+				+1.1
3,462,956	+				-2.6
3,462,956	+				+0.3
3,462,956	+				-0.4
3,462,956	+				+0.3
3,462,956	+				-2.2
3,462,956	+				-0.7
3,462,956	+				+1.7
3,462,956	+				-0.9
3,462,956	+				+0.1
3,462,956	+				+1.0
3,462,956	+				-0.7
3,462,956	+				+0.3
3,462,957	-				-0.2
3,462,957	-				+0.3
3,462,957	-				+1.1
3,462,957	-				+0.1
3,462,957	-				+0.4
3,462,957	-				+0.6
3,462,957	-				-0.7
3,462,957	-				+0.8
3,462,957	-				-0.1
3,462,957	-				+0.4
3,462,957	-				+0.3
3,462,957	-				-0.2
3,462,957	-				+0.7
3,463,096	+		OKGIIK_15845	0.23	+1.7
3,463,096	+		OKGIIK_15845	0.23	+0.4
3,463,096	+		OKGIIK_15845	0.23	+1.8
3,463,096	+		OKGIIK_15845	0.23	-1.7
3,463,096	+		OKGIIK_15845	0.23	-0.2
3,463,096	+		OKGIIK_15845	0.23	-1.7
3,463,097	-		OKGIIK_15845	0.23	+1.1
3,463,097	-		OKGIIK_15845	0.23	-0.2
3,463,097	-		OKGIIK_15845	0.23	-0.7
3,463,097	-		OKGIIK_15845	0.23	+0.8
3,463,097	-		OKGIIK_15845	0.23	+0.4
3,463,097	-		OKGIIK_15845	0.23	-1.4
3,463,348	+		OKGIIK_15845	0.56	+0.3
3,463,348	+		OKGIIK_15845	0.56	+2.1
3,463,348	+		OKGIIK_15845	0.56	-0.1
3,463,348	+		OKGIIK_15845	0.56	+1.1
3,463,349	-		OKGIIK_15845	0.56	+1.3
3,463,349	-		OKGIIK_15845	0.56	-1.1
3,463,349	-		OKGIIK_15845	0.56	+0.7
3,463,707	+				+0.0
3,463,707	+				+0.3
3,463,707	+				-0.4
3,463,707	+				+0.5
3,463,707	+				+1.4
3,463,707	+				-1.1
3,463,707	+				-2.0
3,463,707	+				+0.3
3,463,707	+				-1.0
3,463,707	+				-0.9
3,463,707	+				-0.1
3,463,707	+				+0.6
3,463,708	-				-0.4
3,463,708	-				+0.2
3,463,708	-				+0.1
3,463,708	-				-1.3
3,463,708	-				+1.9
3,463,708	-				-0.1
3,463,708	-				+0.2
3,463,708	-				+0.5
3,463,708	-				+0.1
3,463,708	-				-0.1
3,463,708	-				+0.1
3,463,709	+				-0.2
3,463,709	+				+0.2
3,463,709	+				+0.3
3,463,709	+				-0.3
3,463,709	+				-0.9
3,463,710	-				+0.7
3,463,710	-				-0.0
3,463,710	-				-0.1
3,463,710	-				-0.1
3,463,710	-				-1.9
3,463,710	-				-1.6
3,463,818	+				+0.2
3,463,818	+				-1.6
3,463,923	+	bfr	OKGIIK_15850	0.28	+0.1
3,463,923	+	bfr	OKGIIK_15850	0.28	-0.4
3,463,923	+	bfr	OKGIIK_15850	0.28	-0.4
3,463,924	-	bfr	OKGIIK_15850	0.28	+1.0
3,463,924	-	bfr	OKGIIK_15850	0.28	+0.1
3,463,924	-	bfr	OKGIIK_15850	0.28	+0.6
3,463,924	-	bfr	OKGIIK_15850	0.28	-0.4
3,463,924	-	bfr	OKGIIK_15850	0.28	-1.1