Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15615

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
3,409,711	+		OKGIIK_15610	0.51	+1.0
3,409,711	+		OKGIIK_15610	0.51	-1.2
3,409,711	+		OKGIIK_15610	0.51	+0.4
3,409,711	+		OKGIIK_15610	0.51	-1.2
3,409,711	+		OKGIIK_15610	0.51	+0.8
3,409,711	+		OKGIIK_15610	0.51	-1.0
3,409,712	-		OKGIIK_15610	0.51	-0.4
3,409,712	-		OKGIIK_15610	0.51	-1.2
3,409,712	-		OKGIIK_15610	0.51	-0.2
3,409,712	-		OKGIIK_15610	0.51	-1.2
3,409,712	-		OKGIIK_15610	0.51	-1.5
3,409,712	-		OKGIIK_15610	0.51	-0.4
3,409,712	-		OKGIIK_15610	0.51	-1.8
3,409,712	-		OKGIIK_15610	0.51	+0.0
3,409,712	-		OKGIIK_15610	0.51	-0.1
3,409,712	-		OKGIIK_15610	0.51	-2.5
3,409,712	-		OKGIIK_15610	0.51	-1.2
3,409,712	-		OKGIIK_15610	0.51	-1.2
3,409,712	-		OKGIIK_15610	0.51	-0.1
3,409,720	+		OKGIIK_15610	0.52	-0.4
3,409,720	+		OKGIIK_15610	0.52	+2.1
3,409,720	+		OKGIIK_15610	0.52	-1.3
3,409,720	+		OKGIIK_15610	0.52	-0.5
3,409,720	+		OKGIIK_15610	0.52	+0.8
3,409,721	-		OKGIIK_15610	0.52	-0.8
3,409,721	-		OKGIIK_15610	0.52	+0.6
3,409,721	-		OKGIIK_15610	0.52	-0.4
3,409,721	-		OKGIIK_15610	0.52	-1.1
3,409,721	-		OKGIIK_15610	0.52	-0.2
3,409,721	-		OKGIIK_15610	0.52	-0.6
3,409,721	-		OKGIIK_15610	0.52	-0.9
3,409,721	-		OKGIIK_15610	0.52	-0.2
3,409,721	-		OKGIIK_15610	0.52	+0.0
3,409,721	-		OKGIIK_15610	0.52	-1.5
3,409,721	-		OKGIIK_15610	0.52	+1.9
3,409,721	-		OKGIIK_15610	0.52	+0.8
3,409,721	-		OKGIIK_15610	0.52	-2.0
3,410,198	+				+1.5
3,410,198	+				-0.5
3,410,198	+				-0.2
3,410,198	+				-0.2
3,410,198	+				-1.5
3,410,198	+				-2.2
3,410,198	+				-1.0
3,410,198	+				-1.0
3,410,198	+				+0.8
3,410,198	+				-1.2
3,410,198	+				-1.5
3,410,198	+				+0.2
3,410,198	+				+0.2
3,410,199	-				-1.5
3,410,199	-				+0.6
3,410,199	-				+0.1
3,410,199	-				-0.6
3,410,199	-				-0.7
3,410,199	-				-0.0
3,410,216	+				-1.5
3,410,252	+				+0.8
3,410,252	+				-0.8
3,410,252	+				-0.2
3,410,252	+				-0.4
3,410,252	+				+0.0
3,410,252	+				-0.0
3,410,252	+				-1.8
3,410,252	+				-1.2
3,410,252	+				-2.5
3,410,252	+				-0.1
3,410,252	+				-0.1
3,410,252	+				-2.5
3,410,252	+				-2.0
3,410,252	+				-2.2
3,410,252	+				-1.3
3,410,252	+				-1.9
3,410,252	+				-2.0
3,410,252	+				-1.3
3,410,252	+				-1.2
3,410,252	+				-1.8
3,410,252	+				-0.2
3,410,252	+				-1.8
3,410,252	+				+0.0
3,410,252	+				-1.3
3,410,252	+				-1.4
3,410,252	+				-2.5
3,410,252	+				-2.9
3,410,252	+				-1.2
3,410,252	+				-1.8
3,410,252	+				-0.7
3,410,252	+				-1.0
3,410,252	+				-0.4
3,410,252	+				-2.2
3,410,252	+				+0.4
3,410,252	+				-1.8
3,410,252	+				-1.2
3,410,253	-				-1.8
3,410,253	-				-1.2
3,410,253	-				-2.2
3,410,253	-				-1.5
3,410,253	-				+0.2
3,410,253	-				-1.6
3,410,253	-				-2.5
3,410,253	-				-1.2
3,410,253	-				-1.1
3,410,253	-				-0.8
3,410,253	-				-0.2
3,410,253	-				-1.0
3,410,253	-				-1.2
3,410,253	-				-1.2
3,410,253	-				-2.0
3,410,253	-				-1.2
3,410,253	-				-0.2
3,410,253	-				-1.5
3,410,253	-				-1.5
3,410,253	-				-1.2
3,410,253	-				-0.8
3,410,253	-				-1.2
3,410,253	-				-2.9
3,410,253	-				-2.5
3,410,253	-				-2.0
3,410,266	+				-0.4
3,410,266	+				-1.2
3,410,266	+				+0.4
3,410,266	+				+1.1
3,410,267	-				-0.4
3,410,267	-				-2.0
3,410,267	-				-1.8
3,410,319	+				-2.0
3,410,320	+				+0.3
3,410,320	+				+1.4
3,410,320	+				+0.5
3,410,320	+				-0.6
3,410,320	+				+0.8
3,410,320	+				+0.0
3,410,320	+				-1.4
3,410,320	+				-2.0
3,410,320	+				-1.5
3,410,320	+				-0.2
3,410,320	+				-0.3
3,410,320	+				+0.6
3,410,320	+				-1.8
3,410,320	+				-0.4
3,410,320	+				-1.5
3,410,320	+				+0.4
3,410,320	+				-1.4
3,410,320	+				-0.8
3,410,320	+				-1.8
3,410,320	+				-1.4
3,410,321	-				-0.8
3,410,321	-				-1.2
3,410,321	-				+0.8
3,410,321	-				-1.5
3,410,321	-				+0.6
3,410,321	-				-0.2
3,410,321	-				-2.4
3,410,321	-				-1.2
3,410,321	-				-2.5
3,410,321	-				-0.1
3,410,321	-				+0.4
3,410,321	-				-0.2
3,410,321	-				-1.8
3,410,321	-				-0.7
3,410,321	-				+0.0
3,410,321	-				-1.8
3,410,321	-				-1.4
3,410,321	-				+0.6
3,410,321	-				-1.2
3,410,321	-				-1.9
3,410,321	-				-3.6
3,410,321	-				-1.5
3,410,379	+				-2.0
3,410,379	+				+0.2
3,410,379	+				-0.4
3,410,379	+				-2.4
3,410,379	+				-0.8
3,410,379	+				-1.8
3,410,380	-				-1.5
3,410,380	-				-0.2
3,410,380	-				-2.4
3,410,380	-				-1.4
3,410,380	-				-1.2
3,410,380	-				-1.0
3,410,380	-				-1.4
3,410,380	-				-1.5
3,410,380	-				-1.0
3,410,380	-				-1.2
3,410,434	+		OKGIIK_15615	0.27	-1.8
3,410,435	-		OKGIIK_15615	0.28	-0.5
3,410,435	-		OKGIIK_15615	0.28	-0.9
3,410,435	-		OKGIIK_15615	0.28	+0.1
3,410,565	-				-1.2
3,410,610	-				-1.2
3,410,611	+				+0.6
3,410,663	+				+0.4
3,410,663	+				-1.5
3,410,663	+				+0.9
3,410,663	+				-2.0
3,410,663	+				-0.2
3,410,663	+				-1.8
3,410,663	+				-2.9
3,410,663	+				-0.8
3,410,663	+				-0.1
3,410,663	+				-1.4
3,410,663	+				-1.5
3,410,663	+				+0.3
3,410,663	+				-0.8
3,410,663	+				-1.1
3,410,663	+				+0.0
3,410,664	-				-1.1
3,410,664	-				-1.8
3,410,664	-				-0.8
3,410,664	-				-0.5
3,410,664	-				-0.1
3,410,664	-				-0.8
3,410,664	-				-0.2
3,410,664	-				-2.2
3,410,664	-				-0.9
3,410,664	-				-2.7
3,410,664	-				-2.5
3,410,664	-				-0.1