Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15575

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
3,399,299	+				+0.5
3,399,299	+				-0.1
3,399,299	+				-0.3
3,399,299	+				-0.9
3,399,299	+				-1.7
3,399,300	-				-0.1
3,399,300	-				+0.7
3,399,513	+				-0.9
3,399,513	+				-1.8
3,399,514	-				-1.7
3,399,514	-				-0.0
3,399,704	+		OKGIIK_15570	0.34	+0.7
3,399,704	+		OKGIIK_15570	0.34	-3.4
3,399,704	+		OKGIIK_15570	0.34	-0.2
3,399,704	+		OKGIIK_15570	0.34	+0.4
3,399,704	+		OKGIIK_15570	0.34	-0.3
3,399,705	-		OKGIIK_15570	0.34	-0.5
3,399,705	-		OKGIIK_15570	0.34	-3.4
3,399,806	+		OKGIIK_15570	0.55	-1.8
3,399,806	+		OKGIIK_15570	0.55	+0.4
3,399,806	+		OKGIIK_15570	0.55	+0.1
3,399,806	+		OKGIIK_15570	0.55	-0.0
3,399,806	+		OKGIIK_15570	0.55	+0.7
3,399,807	-		OKGIIK_15570	0.56	-0.1
3,399,807	-		OKGIIK_15570	0.56	-0.9
3,399,807	-		OKGIIK_15570	0.56	-0.5
3,399,807	-		OKGIIK_15570	0.56	+0.0
3,399,807	-		OKGIIK_15570	0.56	+0.8
3,399,807	-		OKGIIK_15570	0.56	+0.4
3,399,807	-		OKGIIK_15570	0.56	-1.5
3,399,807	-		OKGIIK_15570	0.56	-1.2
3,399,807	-		OKGIIK_15570	0.56	-0.9
3,399,851	+		OKGIIK_15570	0.65	-0.3
3,399,851	+		OKGIIK_15570	0.65	+0.2
3,399,851	+		OKGIIK_15570	0.65	-0.2
3,399,905	+		OKGIIK_15570	0.77	-0.5
3,399,906	-		OKGIIK_15570	0.77	-0.4
3,399,941	+		OKGIIK_15570	0.85	-2.8
3,399,942	-		OKGIIK_15570	0.85	+0.7
3,399,942	-		OKGIIK_15570	0.85	+0.7
3,399,942	-		OKGIIK_15570	0.85	-0.8
3,399,942	-		OKGIIK_15570	0.85	+0.1
3,399,972	-				-1.9
3,399,972	-				-0.9
3,399,981	-				+0.1
3,399,981	-				+1.6
3,399,981	-				+0.4
3,400,011	-				+0.4
3,400,011	-				-0.6
3,400,178	+				-0.7
3,400,178	+				-1.5
3,400,179	-				-0.6
3,400,350	+		OKGIIK_15575	0.11	+0.1
3,400,350	+		OKGIIK_15575	0.11	-0.7
3,400,350	+		OKGIIK_15575	0.11	+0.1
3,400,350	+		OKGIIK_15575	0.11	-0.8
3,400,350	+		OKGIIK_15575	0.11	-2.1
3,400,350	+		OKGIIK_15575	0.11	-0.9
3,400,351	-		OKGIIK_15575	0.11	-0.9
3,400,351	-		OKGIIK_15575	0.11	+0.6
3,400,351	-		OKGIIK_15575	0.11	+0.2
3,400,351	-		OKGIIK_15575	0.11	+0.1
3,400,365	+		OKGIIK_15575	0.11	-1.4
3,400,366	-		OKGIIK_15575	0.11	-0.3
3,400,533	+		OKGIIK_15575	0.18	-0.8
3,400,533	+		OKGIIK_15575	0.18	-1.1
3,400,533	+		OKGIIK_15575	0.18	-1.5
3,400,534	-		OKGIIK_15575	0.18	-0.9
3,400,717	-		OKGIIK_15575	0.25	-0.2
3,400,800	+		OKGIIK_15575	0.29	+0.4
3,400,800	+		OKGIIK_15575	0.29	-1.1
3,400,800	+		OKGIIK_15575	0.29	+0.8
3,400,801	-		OKGIIK_15575	0.29	-1.1
3,400,902	+		OKGIIK_15575	0.33	-0.2
3,400,989	+		OKGIIK_15575	0.36	-0.5
3,400,990	-		OKGIIK_15575	0.36	+0.6
3,401,204	+		OKGIIK_15575	0.45	-1.2
3,401,205	-		OKGIIK_15575	0.45	+1.5
3,401,268	+		OKGIIK_15575	0.48	+0.5
3,401,268	+		OKGIIK_15575	0.48	-2.5
3,401,268	+		OKGIIK_15575	0.48	-1.9
3,401,268	+		OKGIIK_15575	0.48	-2.6
3,401,268	+		OKGIIK_15575	0.48	-2.2
3,401,268	+		OKGIIK_15575	0.48	-1.6
3,401,268	+		OKGIIK_15575	0.48	-1.1
3,401,268	+		OKGIIK_15575	0.48	-1.0
3,401,269	-		OKGIIK_15575	0.48	-0.9
3,401,269	-		OKGIIK_15575	0.48	-1.2
3,401,269	-		OKGIIK_15575	0.48	+0.1
3,401,269	-		OKGIIK_15575	0.48	-0.2
3,401,269	-		OKGIIK_15575	0.48	-1.2
3,401,269	-		OKGIIK_15575	0.48	+0.6
3,401,269	-		OKGIIK_15575	0.48	-1.2
3,401,671	+		OKGIIK_15575	0.64	-1.1
3,401,835	+		OKGIIK_15575	0.70	-0.9
3,401,835	+		OKGIIK_15575	0.70	-0.9
3,401,836	-		OKGIIK_15575	0.70	+0.7
3,401,836	-		OKGIIK_15575	0.70	-0.3
3,401,836	-		OKGIIK_15575	0.70	-1.5
3,401,836	-		OKGIIK_15575	0.70	-0.2
3,401,931	+		OKGIIK_15575	0.74	-2.4
3,401,931	+		OKGIIK_15575	0.74	-1.5
3,402,059	+		OKGIIK_15575	0.79	-2.4
3,402,059	+		OKGIIK_15575	0.79	+0.9
3,402,138	+		OKGIIK_15575	0.83	+0.2
3,402,139	-		OKGIIK_15575	0.83	-1.2
3,402,139	-		OKGIIK_15575	0.83	+0.4
3,402,139	-		OKGIIK_15575	0.83	-0.5
3,402,139	-		OKGIIK_15575	0.83	+1.1
3,402,139	-		OKGIIK_15575	0.83	+2.3
3,402,139	-		OKGIIK_15575	0.83	-0.6
3,402,256	+		OKGIIK_15575	0.87	-1.9
3,402,256	+		OKGIIK_15575	0.87	-2.9
3,402,257	-		OKGIIK_15575	0.87	-2.5
3,402,257	-		OKGIIK_15575	0.87	-1.5
3,402,288	+		OKGIIK_15575	0.89	-0.9
3,402,288	+		OKGIIK_15575	0.89	+0.2
3,402,288	+		OKGIIK_15575	0.89	-1.2
3,402,288	+		OKGIIK_15575	0.89	+0.4
3,402,288	+		OKGIIK_15575	0.89	-1.1
3,402,289	-		OKGIIK_15575	0.89	+0.4
3,402,289	-		OKGIIK_15575	0.89	-0.2
3,402,289	-		OKGIIK_15575	0.89	-0.5
3,402,289	-		OKGIIK_15575	0.89	-1.2
3,402,289	-		OKGIIK_15575	0.89	-0.4
3,402,289	-		OKGIIK_15575	0.89	-0.9
3,402,303	+		OKGIIK_15575	0.89	-1.5
3,402,303	+		OKGIIK_15575	0.89	-1.5
3,402,304	-		OKGIIK_15575	0.89	-0.3
3,402,304	-		OKGIIK_15575	0.89	+0.4
3,402,304	-		OKGIIK_15575	0.89	+0.4
3,402,304	-		OKGIIK_15575	0.89	-0.2
3,402,304	-		OKGIIK_15575	0.89	-0.7
3,402,304	-		OKGIIK_15575	0.89	+0.8
3,402,324	+				-1.5
3,402,324	+				-0.2
3,402,324	+				-2.2
3,402,325	-				+0.5
3,402,474	+				-2.4
3,402,474	+				-1.0
3,402,475	-				-0.9
3,402,475	-				-0.5
3,402,475	-				-0.9
3,402,523	+				+1.1
3,402,524	-				-0.5
3,402,524	-				-1.4
3,402,545	+				-0.2
3,402,545	+				-0.3
3,402,545	+				-0.9
3,402,545	+				+1.1
3,402,545	+				-1.7
3,402,545	+				-0.2
3,402,545	+				-0.6
3,402,545	+				-2.8
3,402,545	+				-0.1
3,402,546	-				-0.2
3,402,546	-				-1.7
3,402,546	-				-2.0
3,402,546	-				-0.5
3,402,546	-				-1.2
3,402,559	+				-2.2
3,403,154	+		OKGIIK_15580	0.43	-0.7
3,403,154	+		OKGIIK_15580	0.43	+1.4
3,403,155	-		OKGIIK_15580	0.43	-2.5
3,403,259	+		OKGIIK_15580	0.52	-0.1
3,403,259	+		OKGIIK_15580	0.52	-0.6
3,403,260	-		OKGIIK_15580	0.52	-0.2
3,403,260	-		OKGIIK_15580	0.52	-1.7
3,403,260	-		OKGIIK_15580	0.52	-0.7
3,403,260	-		OKGIIK_15580	0.52	-0.0
3,403,260	-		OKGIIK_15580	0.52	-3.0
3,403,301	+		OKGIIK_15580	0.56	-0.9
3,403,301	+		OKGIIK_15580	0.56	-0.5
3,403,301	+		OKGIIK_15580	0.56	-0.7
3,403,302	-		OKGIIK_15580	0.56	-2.8
3,403,302	-		OKGIIK_15580	0.56	+0.5
3,403,472	+		OKGIIK_15580	0.70	-2.1
3,403,472	+		OKGIIK_15580	0.70	-1.7
3,403,472	+		OKGIIK_15580	0.70	-0.8
3,403,472	+		OKGIIK_15580	0.70	-1.5
3,403,473	-		OKGIIK_15580	0.70	-2.7
3,403,473	-		OKGIIK_15580	0.70	-1.7
3,403,473	-		OKGIIK_15580	0.70	+1.1
3,403,473	-		OKGIIK_15580	0.70	+0.5
3,403,473	-		OKGIIK_15580	0.70	+0.1
3,403,473	-		OKGIIK_15580	0.70	+0.7