Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13425

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
2,897,280	-				+0.6
2,897,280	-				-0.5
2,897,280	-				+1.1
2,897,300	+				-1.0
2,897,300	+				-0.0
2,897,300	+				+0.5
2,897,300	+				+0.4
2,897,300	+				-0.2
2,897,301	-				-0.5
2,897,301	-				+0.5
2,897,303	-				-2.0
2,897,303	-				+0.3
2,897,312	-				+0.3
2,897,583	+		OKGIIK_13420	0.60	+0.2
2,897,584	-		OKGIIK_13420	0.61	-0.6
2,897,765	+				+0.2
2,897,789	+				-1.3
2,897,803	+				-0.3
2,897,803	+				-0.5
2,897,803	+				-0.8
2,897,803	+				+0.8
2,897,804	-				-0.1
2,897,804	-				-1.7
2,897,814	-				+0.5
2,897,976	+				-0.3
2,897,976	+				-0.3
2,897,976	+				+1.3
2,897,977	-				-2.9
2,897,977	-				-1.7
2,897,981	-				-1.0
2,897,981	-				-0.7
2,897,981	-				+1.5
2,898,008	+				+0.4
2,898,009	-				+0.4
2,898,009	-				+0.3
2,898,056	+				-1.9
2,898,218	+				+0.3
2,898,219	-				-0.3
2,898,219	-				-0.3
2,898,312	+				-2.0
2,898,405	+		OKGIIK_13425	0.11	-1.7
2,898,406	-		OKGIIK_13425	0.11	-1.0
2,898,406	-		OKGIIK_13425	0.11	+0.3
2,898,486	+		OKGIIK_13425	0.13	-0.5
2,898,538	+		OKGIIK_13425	0.15	+0.7
2,898,615	+		OKGIIK_13425	0.17	-0.1
2,898,615	+		OKGIIK_13425	0.17	-0.7
2,898,615	+		OKGIIK_13425	0.17	-1.3
2,898,615	+		OKGIIK_13425	0.17	-1.3
2,898,615	+		OKGIIK_13425	0.17	-0.4
2,898,687	+		OKGIIK_13425	0.20	+0.9
2,898,696	+		OKGIIK_13425	0.20	-1.2
2,898,696	+		OKGIIK_13425	0.20	+1.3
2,898,697	-		OKGIIK_13425	0.20	+0.5
2,898,697	-		OKGIIK_13425	0.20	-2.2
2,898,768	+		OKGIIK_13425	0.22	-0.2
2,898,769	-		OKGIIK_13425	0.22	-1.0
2,898,900	+		OKGIIK_13425	0.26	-0.5
2,898,900	+		OKGIIK_13425	0.26	+0.4
2,898,901	-		OKGIIK_13425	0.26	-1.0
2,899,030	-		OKGIIK_13425	0.30	-0.0
2,899,030	-		OKGIIK_13425	0.30	-0.7
2,899,050	+		OKGIIK_13425	0.31	-0.1
2,899,050	+		OKGIIK_13425	0.31	+1.3
2,899,050	+		OKGIIK_13425	0.31	-1.0
2,899,077	+		OKGIIK_13425	0.31	+0.6
2,899,110	+		OKGIIK_13425	0.32	-1.3
2,899,110	+		OKGIIK_13425	0.32	-0.7
2,899,111	-		OKGIIK_13425	0.32	-0.1
2,899,153	-		OKGIIK_13425	0.34	+0.1
2,899,153	-		OKGIIK_13425	0.34	+1.3
2,899,248	+		OKGIIK_13425	0.37	-1.7
2,899,248	+		OKGIIK_13425	0.37	+1.6
2,899,248	+		OKGIIK_13425	0.37	+0.3
2,899,248	+		OKGIIK_13425	0.37	-0.9
2,899,249	-		OKGIIK_13425	0.37	-0.7
2,899,249	-		OKGIIK_13425	0.37	-0.0
2,899,249	-		OKGIIK_13425	0.37	+0.2
2,899,283	-		OKGIIK_13425	0.38	-1.9
2,899,283	-		OKGIIK_13425	0.38	-1.4
2,899,357	-		OKGIIK_13425	0.40	-2.3
2,899,457	-		OKGIIK_13425	0.43	+0.6
2,899,488	-		OKGIIK_13425	0.44	-2.2
2,899,518	+		OKGIIK_13425	0.45	+0.3
2,899,519	-		OKGIIK_13425	0.45	-0.4
2,899,647	+		OKGIIK_13425	0.49	-0.6
2,899,648	-		OKGIIK_13425	0.49	+0.8
2,899,648	-		OKGIIK_13425	0.49	-2.6
2,899,828	-		OKGIIK_13425	0.54	+0.3
2,899,828	-		OKGIIK_13425	0.54	-1.0
2,899,902	+		OKGIIK_13425	0.56	+0.3
2,899,902	+		OKGIIK_13425	0.56	+1.4
2,899,902	+		OKGIIK_13425	0.56	-0.9
2,899,902	+		OKGIIK_13425	0.56	+0.1
2,899,902	+		OKGIIK_13425	0.56	-0.4
2,899,902	+		OKGIIK_13425	0.56	-1.0
2,899,902	+		OKGIIK_13425	0.56	-1.0
2,899,903	-		OKGIIK_13425	0.56	-0.3
2,899,903	-		OKGIIK_13425	0.56	+0.6
2,899,903	-		OKGIIK_13425	0.56	-1.2
2,899,903	-		OKGIIK_13425	0.56	-0.4
2,899,958	-		OKGIIK_13425	0.58	+0.3
2,900,116	+		OKGIIK_13425	0.63	-0.4
2,900,116	+		OKGIIK_13425	0.63	+1.6
2,900,116	+		OKGIIK_13425	0.63	-0.1
2,900,116	+		OKGIIK_13425	0.63	-0.0
2,900,116	+		OKGIIK_13425	0.63	-0.6
2,900,116	+		OKGIIK_13425	0.63	-0.9
2,900,116	+		OKGIIK_13425	0.63	-0.1
2,900,117	-		OKGIIK_13425	0.63	-0.6
2,900,117	-		OKGIIK_13425	0.63	+0.5
2,900,117	-		OKGIIK_13425	0.63	-3.1
2,900,117	-		OKGIIK_13425	0.63	-1.3
2,900,131	+		OKGIIK_13425	0.63	+1.3
2,900,131	+		OKGIIK_13425	0.63	+0.7
2,900,132	-		OKGIIK_13425	0.63	-2.6
2,900,132	-		OKGIIK_13425	0.63	-0.4
2,900,278	+		OKGIIK_13425	0.68	-0.3
2,900,279	-		OKGIIK_13425	0.68	-0.2
2,900,279	-		OKGIIK_13425	0.68	-0.1
2,900,279	-		OKGIIK_13425	0.68	-0.1
2,900,395	-		OKGIIK_13425	0.71	-0.3
2,900,585	-		OKGIIK_13425	0.77	-0.7
2,900,674	+		OKGIIK_13425	0.80	-1.9
2,900,674	+		OKGIIK_13425	0.80	-1.5
2,900,674	+		OKGIIK_13425	0.80	-0.8
2,900,675	-		OKGIIK_13425	0.80	-1.9
2,900,675	-		OKGIIK_13425	0.80	+0.6
2,900,675	-		OKGIIK_13425	0.80	-0.2
2,900,675	-		OKGIIK_13425	0.80	-0.3
2,900,675	-		OKGIIK_13425	0.80	-1.3
2,900,675	-		OKGIIK_13425	0.80	-0.1
2,900,731	-		OKGIIK_13425	0.81	-0.0
2,900,731	-		OKGIIK_13425	0.81	-0.4
2,900,868	+		OKGIIK_13425	0.86	-2.2
2,900,869	-		OKGIIK_13425	0.86	+0.4
2,900,869	-		OKGIIK_13425	0.86	-0.3
2,900,869	-		OKGIIK_13425	0.86	-0.7
2,900,878	+		OKGIIK_13425	0.86	-1.5
2,901,039	-				-1.2
2,901,048	+				-0.9
2,901,048	+				-0.7
2,901,049	-				+0.1
2,901,156	+				-1.0
2,901,157	-				-2.2
2,901,157	-				-3.0
2,901,157	-				-1.0
2,901,256	-				+0.7
2,901,276	-				+0.1
2,901,523	+		OKGIIK_13430	0.15	-1.5
2,901,523	+		OKGIIK_13430	0.15	+0.0
2,901,523	+		OKGIIK_13430	0.15	+1.6
2,901,632	+		OKGIIK_13430	0.24	-1.0
2,901,633	-		OKGIIK_13430	0.24	+1.6
2,901,633	-		OKGIIK_13430	0.24	-2.2
2,901,633	-		OKGIIK_13430	0.24	-0.8
2,901,689	+		OKGIIK_13430	0.28	+1.2
2,901,690	-		OKGIIK_13430	0.28	-1.3
2,901,690	-		OKGIIK_13430	0.28	+1.0
2,901,717	-		OKGIIK_13430	0.30	-1.2
2,901,749	+		OKGIIK_13430	0.33	-0.7
2,901,761	+		OKGIIK_13430	0.34	+1.0
2,901,761	+		OKGIIK_13430	0.34	-0.5
2,901,762	-		OKGIIK_13430	0.34	+1.0
2,901,773	+		OKGIIK_13430	0.35	-0.9
2,901,773	+		OKGIIK_13430	0.35	-2.2
2,901,774	-		OKGIIK_13430	0.35	+0.9
2,901,793	+		OKGIIK_13430	0.37	-0.7
2,901,794	-		OKGIIK_13430	0.37	+0.3
2,901,804	-		OKGIIK_13430	0.37	+1.7
2,901,804	-		OKGIIK_13430	0.37	+0.6
2,901,804	-		OKGIIK_13430	0.37	+0.0
2,901,804	-		OKGIIK_13430	0.37	+0.3
2,901,817	+		OKGIIK_13430	0.38	+0.6
2,901,817	+		OKGIIK_13430	0.38	+1.0
2,901,817	+		OKGIIK_13430	0.38	+1.7
2,901,817	+		OKGIIK_13430	0.38	+1.2
2,901,817	+		OKGIIK_13430	0.38	-0.8
2,901,818	-		OKGIIK_13430	0.39	-0.0
2,901,818	-		OKGIIK_13430	0.39	+0.3
2,901,856	-		OKGIIK_13430	0.42	+0.1
2,901,912	+		OKGIIK_13430	0.46	+0.2
2,901,913	-		OKGIIK_13430	0.46	-0.1
2,901,913	-		OKGIIK_13430	0.46	+0.7
2,901,913	-		OKGIIK_13430	0.46	-0.1
2,901,972	+		OKGIIK_13430	0.51	+0.5
2,901,972	+		OKGIIK_13430	0.51	-0.1
2,901,972	+		OKGIIK_13430	0.51	-0.9
2,901,973	-		OKGIIK_13430	0.51	-0.7
2,901,973	-		OKGIIK_13430	0.51	+0.7
2,902,123	+		OKGIIK_13430	0.63	+0.1
2,902,124	-		OKGIIK_13430	0.63	-0.4
2,902,124	-		OKGIIK_13430	0.63	+2.1
2,902,124	-		OKGIIK_13430	0.63	+1.0
2,902,124	-		OKGIIK_13430	0.63	+0.0
2,902,124	-		OKGIIK_13430	0.63	+0.7
2,902,124	-		OKGIIK_13430	0.63	-0.3
2,902,124	-		OKGIIK_13430	0.63	-0.3
2,902,126	+		OKGIIK_13430	0.63	-1.1
2,902,199	+		OKGIIK_13430	0.69	-1.9
2,902,199	+		OKGIIK_13430	0.69	-0.9
2,902,200	-		OKGIIK_13430	0.69	-1.0
2,902,200	-		OKGIIK_13430	0.69	+0.0
2,902,211	+		OKGIIK_13430	0.70	-2.6