Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12905

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
2,782,843	+		OKGIIK_12895	0.12	-0.1
2,782,843	+		OKGIIK_12895	0.12	-0.8
2,782,843	+		OKGIIK_12895	0.12	-0.1
2,783,108	+		OKGIIK_12895	0.56	-0.9
2,783,108	+		OKGIIK_12895	0.56	-1.3
2,783,108	+		OKGIIK_12895	0.56	-0.8
2,783,109	-		OKGIIK_12895	0.56	-0.1
2,783,109	-		OKGIIK_12895	0.56	-2.5
2,783,109	-		OKGIIK_12895	0.56	-0.5
2,783,109	-		OKGIIK_12895	0.56	-1.3
2,783,167	+		OKGIIK_12895	0.66	-1.0
2,783,167	+		OKGIIK_12895	0.66	-1.6
2,783,167	+		OKGIIK_12895	0.66	-0.6
2,783,167	+		OKGIIK_12895	0.66	+0.1
2,783,167	+		OKGIIK_12895	0.66	-0.6
2,783,167	+		OKGIIK_12895	0.66	-1.1
2,783,167	+		OKGIIK_12895	0.66	-1.1
2,783,167	+		OKGIIK_12895	0.66	+0.5
2,783,168	-		OKGIIK_12895	0.66	+0.2
2,783,168	-		OKGIIK_12895	0.66	-0.5
2,783,168	-		OKGIIK_12895	0.66	-1.0
2,783,168	-		OKGIIK_12895	0.66	-0.2
2,783,195	-		OKGIIK_12895	0.70	+2.2
2,783,400	-				+1.0
2,783,418	-				-2.1
2,783,418	-				-2.4
2,783,418	-				-0.8
2,783,561	+	ychJ	OKGIIK_12900	0.33	-0.8
2,783,561	+	ychJ	OKGIIK_12900	0.33	-0.6
2,783,562	-	ychJ	OKGIIK_12900	0.33	-0.5
2,783,562	-	ychJ	OKGIIK_12900	0.33	-0.9
2,783,562	-	ychJ	OKGIIK_12900	0.33	-1.3
2,783,562	-	ychJ	OKGIIK_12900	0.33	-0.8
2,783,562	-	ychJ	OKGIIK_12900	0.33	-0.2
2,783,562	-	ychJ	OKGIIK_12900	0.33	-1.6
2,783,562	-	ychJ	OKGIIK_12900	0.33	+0.2
2,783,562	-	ychJ	OKGIIK_12900	0.33	+0.2
2,783,562	-	ychJ	OKGIIK_12900	0.33	-1.6
2,783,562	-	ychJ	OKGIIK_12900	0.33	-1.1
2,783,562	-	ychJ	OKGIIK_12900	0.33	-0.9
2,783,582	+	ychJ	OKGIIK_12900	0.38	-0.6
2,783,582	+	ychJ	OKGIIK_12900	0.38	+0.4
2,783,582	+	ychJ	OKGIIK_12900	0.38	-0.4
2,783,582	+	ychJ	OKGIIK_12900	0.38	+1.2
2,783,582	+	ychJ	OKGIIK_12900	0.38	-0.6
2,783,582	+	ychJ	OKGIIK_12900	0.38	-1.1
2,783,582	+	ychJ	OKGIIK_12900	0.38	-0.3
2,783,583	-	ychJ	OKGIIK_12900	0.38	+0.3
2,783,583	-	ychJ	OKGIIK_12900	0.38	-1.1
2,783,583	-	ychJ	OKGIIK_12900	0.38	+1.5
2,783,583	-	ychJ	OKGIIK_12900	0.38	-1.6
2,783,583	-	ychJ	OKGIIK_12900	0.38	-1.4
2,783,583	-	ychJ	OKGIIK_12900	0.38	-0.4
2,783,583	-	ychJ	OKGIIK_12900	0.38	+0.2
2,783,583	-	ychJ	OKGIIK_12900	0.38	-0.6
2,783,583	-	ychJ	OKGIIK_12900	0.38	-1.3
2,783,583	-	ychJ	OKGIIK_12900	0.38	-1.5
2,783,802	-				-0.1
2,783,802	-				-2.1
2,783,802	-				-0.3
2,783,802	-				-2.5
2,783,802	-				-0.8
2,783,804	+				-1.9
2,783,804	+				-1.2
2,783,804	+				-2.0
2,783,804	+				+0.2
2,783,804	+				-0.9
2,783,804	+				+0.8
2,783,804	+				+1.2
2,783,804	+				-0.6
2,783,804	+				+0.2
2,783,804	+				-0.7
2,783,804	+				-0.6
2,783,804	+				-1.6
2,783,804	+				-0.1
2,783,805	-				+0.2
2,783,805	-				-1.9
2,783,805	-				+0.4
2,783,805	-				-0.4
2,783,805	-				+2.1
2,783,805	-				-0.1
2,784,197	-	ligB	OKGIIK_12905	0.21	+0.8
2,784,245	+	ligB	OKGIIK_12905	0.24	-0.1
2,784,245	+	ligB	OKGIIK_12905	0.24	-1.4
2,784,245	+	ligB	OKGIIK_12905	0.24	+2.4
2,784,246	-	ligB	OKGIIK_12905	0.24	-2.7
2,784,246	-	ligB	OKGIIK_12905	0.24	-1.1
2,784,458	+	ligB	OKGIIK_12905	0.37	+0.4
2,784,458	+	ligB	OKGIIK_12905	0.37	-0.9
2,784,458	+	ligB	OKGIIK_12905	0.37	+0.6
2,784,458	+	ligB	OKGIIK_12905	0.37	-1.0
2,784,458	+	ligB	OKGIIK_12905	0.37	-0.9
2,784,458	+	ligB	OKGIIK_12905	0.37	-1.4
2,784,458	+	ligB	OKGIIK_12905	0.37	-0.7
2,784,458	+	ligB	OKGIIK_12905	0.37	+1.8
2,784,458	+	ligB	OKGIIK_12905	0.37	-2.4
2,784,459	-	ligB	OKGIIK_12905	0.37	-1.7
2,784,459	-	ligB	OKGIIK_12905	0.37	+0.2
2,784,459	-	ligB	OKGIIK_12905	0.37	-0.4
2,784,459	-	ligB	OKGIIK_12905	0.37	-2.7
2,784,459	-	ligB	OKGIIK_12905	0.37	+0.4
2,784,459	-	ligB	OKGIIK_12905	0.37	+0.7
2,784,459	-	ligB	OKGIIK_12905	0.37	+0.2
2,784,459	-	ligB	OKGIIK_12905	0.37	-1.1
2,784,588	+	ligB	OKGIIK_12905	0.45	-1.8
2,784,588	+	ligB	OKGIIK_12905	0.45	+0.8
2,784,588	+	ligB	OKGIIK_12905	0.45	-0.8
2,784,589	-	ligB	OKGIIK_12905	0.45	+0.1
2,784,589	-	ligB	OKGIIK_12905	0.45	-1.0
2,784,589	-	ligB	OKGIIK_12905	0.45	-0.4
2,784,589	-	ligB	OKGIIK_12905	0.45	-0.4
2,784,662	+	ligB	OKGIIK_12905	0.49	+0.2
2,784,662	+	ligB	OKGIIK_12905	0.49	-1.1
2,784,662	+	ligB	OKGIIK_12905	0.49	+1.4
2,784,662	+	ligB	OKGIIK_12905	0.49	+1.2
2,784,751	+	ligB	OKGIIK_12905	0.54	-1.8
2,784,751	+	ligB	OKGIIK_12905	0.54	-0.6
2,784,751	+	ligB	OKGIIK_12905	0.54	-1.4
2,784,751	+	ligB	OKGIIK_12905	0.54	-0.5
2,784,752	-	ligB	OKGIIK_12905	0.54	-1.1
2,784,752	-	ligB	OKGIIK_12905	0.54	-0.1
2,784,752	-	ligB	OKGIIK_12905	0.54	-0.8
2,784,752	-	ligB	OKGIIK_12905	0.54	+0.3
2,784,753	+	ligB	OKGIIK_12905	0.54	+0.5
2,784,754	-	ligB	OKGIIK_12905	0.54	-0.2
2,784,754	-	ligB	OKGIIK_12905	0.54	-0.6
2,784,754	-	ligB	OKGIIK_12905	0.54	+0.2
2,784,754	-	ligB	OKGIIK_12905	0.54	-0.6
2,784,754	-	ligB	OKGIIK_12905	0.54	-1.2
2,784,754	-	ligB	OKGIIK_12905	0.54	+0.2
2,784,960	+	ligB	OKGIIK_12905	0.67	-2.1
2,784,960	+	ligB	OKGIIK_12905	0.67	-1.6
2,784,960	+	ligB	OKGIIK_12905	0.67	-0.6
2,784,960	+	ligB	OKGIIK_12905	0.67	+0.2
2,784,960	+	ligB	OKGIIK_12905	0.67	-1.4
2,784,960	+	ligB	OKGIIK_12905	0.67	-0.1
2,784,961	-	ligB	OKGIIK_12905	0.67	-1.1
2,784,961	-	ligB	OKGIIK_12905	0.67	-0.8
2,785,104	+	ligB	OKGIIK_12905	0.75	-1.4
2,785,104	+	ligB	OKGIIK_12905	0.75	-1.4
2,785,104	+	ligB	OKGIIK_12905	0.75	-0.4
2,785,104	+	ligB	OKGIIK_12905	0.75	+0.5
2,785,104	+	ligB	OKGIIK_12905	0.75	+0.2
2,785,104	+	ligB	OKGIIK_12905	0.75	-0.9
2,785,105	-	ligB	OKGIIK_12905	0.75	+0.9
2,785,105	-	ligB	OKGIIK_12905	0.75	+0.5
2,785,105	-	ligB	OKGIIK_12905	0.75	-1.4
2,785,105	-	ligB	OKGIIK_12905	0.75	-0.9
2,785,105	-	ligB	OKGIIK_12905	0.75	+0.8
2,785,105	-	ligB	OKGIIK_12905	0.75	-2.1
2,785,105	-	ligB	OKGIIK_12905	0.75	-1.9
2,785,105	-	ligB	OKGIIK_12905	0.75	-0.8
2,785,238	+	ligB	OKGIIK_12905	0.83	-1.6
2,785,239	-	ligB	OKGIIK_12905	0.83	+0.4
2,785,239	-	ligB	OKGIIK_12905	0.83	-0.1
2,785,239	-	ligB	OKGIIK_12905	0.83	-0.0
2,785,335	+	ligB	OKGIIK_12905	0.89	-0.9
2,785,335	+	ligB	OKGIIK_12905	0.89	-0.8
2,785,608	+				-1.4
2,785,608	+				-0.3
2,785,609	-				-1.8
2,785,609	-				+1.8
2,785,751	-		OKGIIK_12910	0.17	-0.8
2,785,755	+		OKGIIK_12910	0.18	-1.4
2,785,755	+		OKGIIK_12910	0.18	-0.2
2,785,755	+		OKGIIK_12910	0.18	+0.8
2,785,756	-		OKGIIK_12910	0.18	+1.0
2,785,756	-		OKGIIK_12910	0.18	-0.2
2,785,756	-		OKGIIK_12910	0.18	+0.0
2,785,756	-		OKGIIK_12910	0.18	+0.4
2,785,756	-		OKGIIK_12910	0.18	-0.4
2,785,756	-		OKGIIK_12910	0.18	-0.8
2,785,756	-		OKGIIK_12910	0.18	+0.1
2,786,028	+		OKGIIK_12910	0.53	-1.1
2,786,028	+		OKGIIK_12910	0.53	+0.1
2,786,028	+		OKGIIK_12910	0.53	+0.7
2,786,028	+		OKGIIK_12910	0.53	-0.9
2,786,029	-		OKGIIK_12910	0.53	-1.1
2,786,029	-		OKGIIK_12910	0.53	+0.4
2,786,029	-		OKGIIK_12910	0.53	-0.4
2,786,029	-		OKGIIK_12910	0.53	-1.0
2,786,029	-		OKGIIK_12910	0.53	-0.9
2,786,136	+		OKGIIK_12910	0.67	-1.2
2,786,136	+		OKGIIK_12910	0.67	+0.2
2,786,136	+		OKGIIK_12910	0.67	+0.1
2,786,136	+		OKGIIK_12910	0.67	-1.4
2,786,136	+		OKGIIK_12910	0.67	-1.1
2,786,136	+		OKGIIK_12910	0.67	+0.5
2,786,136	+		OKGIIK_12910	0.67	-0.4
2,786,136	+		OKGIIK_12910	0.67	-0.4
2,786,137	-		OKGIIK_12910	0.67	+0.8
2,786,137	-		OKGIIK_12910	0.67	+0.5
2,786,242	+		OKGIIK_12910	0.80	-0.8
2,786,242	+		OKGIIK_12910	0.80	-0.8
2,786,243	-		OKGIIK_12910	0.80	-1.0
2,786,524	+				+0.8
2,786,524	+				+0.0
2,786,524	+				+0.0
2,786,524	+				-0.6
2,786,525	-				+0.3
2,786,525	-				-0.5
2,786,525	-				-2.5
2,786,525	-				-1.1