Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11995

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
2,582,595	+	acrB	OKGIIK_11990	0.69	-1.9
2,582,595	+	acrB	OKGIIK_11990	0.69	+0.2
2,582,595	+	acrB	OKGIIK_11990	0.69	+0.9
2,582,596	-	acrB	OKGIIK_11990	0.69	+1.2
2,582,596	-	acrB	OKGIIK_11990	0.69	-1.6
2,582,596	-	acrB	OKGIIK_11990	0.69	-0.2
2,582,596	-	acrB	OKGIIK_11990	0.69	+1.0
2,582,596	-	acrB	OKGIIK_11990	0.69	-0.8
2,582,596	-	acrB	OKGIIK_11990	0.69	+1.2
2,582,733	+	acrB	OKGIIK_11990	0.74	+1.0
2,582,733	+	acrB	OKGIIK_11990	0.74	+0.9
2,582,733	+	acrB	OKGIIK_11990	0.74	+0.7
2,582,733	+	acrB	OKGIIK_11990	0.74	-0.5
2,582,733	+	acrB	OKGIIK_11990	0.74	+0.5
2,582,734	-	acrB	OKGIIK_11990	0.74	-0.8
2,582,734	-	acrB	OKGIIK_11990	0.74	+0.2
2,582,734	-	acrB	OKGIIK_11990	0.74	-2.5
2,582,734	-	acrB	OKGIIK_11990	0.74	+0.2
2,582,734	-	acrB	OKGIIK_11990	0.74	+1.7
2,582,734	-	acrB	OKGIIK_11990	0.74	+1.2
2,582,835	+	acrB	OKGIIK_11990	0.77	+1.7
2,582,835	+	acrB	OKGIIK_11990	0.77	+0.4
2,582,835	+	acrB	OKGIIK_11990	0.77	+0.2
2,582,835	+	acrB	OKGIIK_11990	0.77	+0.2
2,582,835	+	acrB	OKGIIK_11990	0.77	+1.8
2,582,895	+	acrB	OKGIIK_11990	0.79	+1.7
2,582,895	+	acrB	OKGIIK_11990	0.79	+1.2
2,582,895	+	acrB	OKGIIK_11990	0.79	+1.1
2,582,895	+	acrB	OKGIIK_11990	0.79	+0.3
2,583,009	+	acrB	OKGIIK_11990	0.83	+1.2
2,583,010	-	acrB	OKGIIK_11990	0.83	+0.7
2,583,010	-	acrB	OKGIIK_11990	0.83	+1.2
2,583,024	+	acrB	OKGIIK_11990	0.83	+0.9
2,583,024	+	acrB	OKGIIK_11990	0.83	-0.8
2,583,025	-	acrB	OKGIIK_11990	0.83	+0.8
2,583,025	-	acrB	OKGIIK_11990	0.83	-1.1
2,583,025	-	acrB	OKGIIK_11990	0.83	+1.2
2,583,025	-	acrB	OKGIIK_11990	0.83	-1.9
2,583,025	-	acrB	OKGIIK_11990	0.83	+0.8
2,583,087	+	acrB	OKGIIK_11990	0.85	+0.2
2,583,087	+	acrB	OKGIIK_11990	0.85	+2.0
2,583,088	-	acrB	OKGIIK_11990	0.85	-1.4
2,583,088	-	acrB	OKGIIK_11990	0.85	+1.1
2,583,088	-	acrB	OKGIIK_11990	0.85	+0.2
2,583,135	+	acrB	OKGIIK_11990	0.87	+0.1
2,583,135	+	acrB	OKGIIK_11990	0.87	-1.4
2,583,135	+	acrB	OKGIIK_11990	0.87	+1.7
2,583,136	-	acrB	OKGIIK_11990	0.87	+1.2
2,583,136	-	acrB	OKGIIK_11990	0.87	+0.4
2,583,136	-	acrB	OKGIIK_11990	0.87	-0.1
2,583,136	-	acrB	OKGIIK_11990	0.87	-0.8
2,583,136	-	acrB	OKGIIK_11990	0.87	+0.9
2,583,472	-				+2.5
2,583,692	+		OKGIIK_11995	0.11	+0.9
2,583,692	+		OKGIIK_11995	0.11	+1.6
2,583,692	+		OKGIIK_11995	0.11	+1.7
2,583,692	+		OKGIIK_11995	0.11	+1.2
2,583,693	-		OKGIIK_11995	0.12	+1.6
2,583,693	-		OKGIIK_11995	0.12	-1.1
2,583,693	-		OKGIIK_11995	0.12	+1.5
2,584,154	+		OKGIIK_11995	0.49	+0.8
2,584,154	+		OKGIIK_11995	0.49	+1.8
2,584,155	-		OKGIIK_11995	0.50	+1.7
2,584,155	-		OKGIIK_11995	0.50	+0.8
2,584,155	-		OKGIIK_11995	0.50	+0.9
2,584,155	-		OKGIIK_11995	0.50	-0.4
2,584,235	+		OKGIIK_11995	0.56	+2.7
2,584,235	+		OKGIIK_11995	0.56	+0.2
2,584,235	+		OKGIIK_11995	0.56	+0.7
2,584,236	-		OKGIIK_11995	0.56	+1.6
2,584,236	-		OKGIIK_11995	0.56	+1.1
2,584,236	-		OKGIIK_11995	0.56	+1.2
2,584,236	-		OKGIIK_11995	0.56	+1.4
2,584,236	-		OKGIIK_11995	0.56	-0.1
2,584,244	+		OKGIIK_11995	0.57	+0.8
2,584,244	+		OKGIIK_11995	0.57	+1.9
2,584,245	-		OKGIIK_11995	0.57	+0.5
2,584,245	-		OKGIIK_11995	0.57	+0.1
2,584,245	-		OKGIIK_11995	0.57	+0.8
2,584,245	-		OKGIIK_11995	0.57	+0.6
2,584,245	-		OKGIIK_11995	0.57	-0.9
2,584,287	-		OKGIIK_11995	0.60	+0.2
2,584,777	+				+1.2
2,584,777	+				-0.3
2,584,778	-				+0.2
2,584,778	-				-1.0
2,584,778	-				-0.1
2,584,830	+				+0.2
2,584,830	+				+0.7
2,584,830	+				+2.0
2,584,830	+				-0.2
2,584,831	-				+0.8
2,584,831	-				-0.2
2,584,833	+				+0.7
2,584,833	+				+0.4
2,584,833	+				-1.1
2,584,833	+				+0.0
2,584,833	+				-0.5
2,584,833	+				-1.1
2,584,833	+				+0.2
2,584,833	+				-0.4
2,584,833	+				-2.1
2,584,833	+				-1.9
2,584,833	+				+0.7
2,584,833	+				-1.9
2,584,833	+				+0.4
2,584,833	+				+0.4
2,584,833	+				-1.0
2,584,833	+				+0.3
2,584,833	+				-0.0
2,584,833	+				-0.8
2,584,833	+				-1.1
2,584,833	+				-0.8
2,584,833	+				-0.6
2,584,833	+				+1.0
2,584,833	+				+1.2
2,584,833	+				-0.1
2,584,833	+				-0.2
2,584,833	+				+0.5
2,584,833	+				+0.2
2,584,833	+				+0.6
2,584,833	+				+0.8
2,584,833	+				-1.9
2,584,833	+				+0.5
2,584,833	+				-0.2
2,584,833	+				+0.9
2,584,833	+				-0.2
2,584,833	+				+2.1
2,584,833	+				+1.7
2,584,833	+				+0.4
2,584,833	+				+1.0
2,584,834	-				-1.8
2,584,834	-				+0.6
2,584,834	-				-0.2
2,584,834	-				-1.1
2,584,834	-				-0.7
2,584,834	-				-2.2
2,584,834	-				-0.3
2,584,834	-				-0.1
2,584,834	-				-1.8
2,584,834	-				-1.9
2,584,834	-				-2.9
2,584,834	-				+0.0
2,584,834	-				-0.8
2,584,834	-				-0.4
2,584,834	-				+0.4
2,584,834	-				+1.8
2,584,834	-				-0.8
2,584,834	-				-1.1
2,584,834	-				-1.6
2,585,074	+	marR	OKGIIK_12000	0.38	-0.0
2,585,074	+	marR	OKGIIK_12000	0.38	-0.1
2,585,074	+	marR	OKGIIK_12000	0.38	+1.8
2,585,074	+	marR	OKGIIK_12000	0.38	-1.1
2,585,074	+	marR	OKGIIK_12000	0.38	+0.3
2,585,074	+	marR	OKGIIK_12000	0.38	+0.1
2,585,074	+	marR	OKGIIK_12000	0.38	+1.2
2,585,074	+	marR	OKGIIK_12000	0.38	-0.8
2,585,074	+	marR	OKGIIK_12000	0.38	+1.4
2,585,074	+	marR	OKGIIK_12000	0.38	-1.9
2,585,075	-	marR	OKGIIK_12000	0.39	-0.8
2,585,075	-	marR	OKGIIK_12000	0.39	-0.9
2,585,075	-	marR	OKGIIK_12000	0.39	+1.6
2,585,075	-	marR	OKGIIK_12000	0.39	-1.3
2,585,075	-	marR	OKGIIK_12000	0.39	-1.6
2,585,075	-	marR	OKGIIK_12000	0.39	-1.4
2,585,075	-	marR	OKGIIK_12000	0.39	+1.0
2,585,075	-	marR	OKGIIK_12000	0.39	-2.4
2,585,075	-	marR	OKGIIK_12000	0.39	-0.4
2,585,075	-	marR	OKGIIK_12000	0.39	-1.1
2,585,221	+	marR	OKGIIK_12000	0.71	-1.6
2,585,221	+	marR	OKGIIK_12000	0.71	-1.3
2,585,221	+	marR	OKGIIK_12000	0.71	-0.7
2,585,221	+	marR	OKGIIK_12000	0.71	-0.4
2,585,221	+	marR	OKGIIK_12000	0.71	-0.9
2,585,221	+	marR	OKGIIK_12000	0.71	-3.3
2,585,221	+	marR	OKGIIK_12000	0.71	-0.6
2,585,221	+	marR	OKGIIK_12000	0.71	-0.0
2,585,221	+	marR	OKGIIK_12000	0.71	-1.1
2,585,222	-	marR	OKGIIK_12000	0.71	-2.1
2,585,222	-	marR	OKGIIK_12000	0.71	-0.1
2,585,222	-	marR	OKGIIK_12000	0.71	-1.6
2,585,222	-	marR	OKGIIK_12000	0.71	+0.9
2,585,222	-	marR	OKGIIK_12000	0.71	-0.5
2,585,222	-	marR	OKGIIK_12000	0.71	-1.0
2,585,222	-	marR	OKGIIK_12000	0.71	-0.7
2,585,222	-	marR	OKGIIK_12000	0.71	-1.6
2,585,222	-	marR	OKGIIK_12000	0.71	-0.4
2,585,324	-				-0.5
2,585,398	+				+0.6
2,585,398	+				+0.2
2,585,398	+				-0.4
2,585,398	+				+1.1
2,585,398	+				-0.8
2,585,398	+				+0.6
2,585,398	+				-0.9
2,585,399	-				-1.5
2,585,399	-				-1.7
2,585,399	-				-0.2
2,585,399	-				+0.2
2,585,399	-				-1.3
2,585,399	-				-1.6
2,585,399	-				+1.9
2,585,399	-				-0.8
2,585,399	-				+0.1