Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09445

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
2,048,414	+	argB	OKGIIK_09440	0.27	+2.3
2,048,414	+	argB	OKGIIK_09440	0.27	+0.3
2,048,415	-	argB	OKGIIK_09440	0.28	-0.7
2,048,415	-	argB	OKGIIK_09440	0.28	-0.9
2,048,771	+	argB	OKGIIK_09440	0.54	+0.3
2,048,771	+	argB	OKGIIK_09440	0.54	-0.9
2,048,771	+	argB	OKGIIK_09440	0.54	-0.5
2,048,771	+	argB	OKGIIK_09440	0.54	-0.0
2,048,772	-	argB	OKGIIK_09440	0.54	+0.1
2,048,772	-	argB	OKGIIK_09440	0.54	-0.0
2,048,772	-	argB	OKGIIK_09440	0.54	-1.5
2,048,957	+	argB	OKGIIK_09440	0.68	-0.7
2,048,958	-	argB	OKGIIK_09440	0.68	+0.7
2,048,958	-	argB	OKGIIK_09440	0.68	+0.1
2,048,958	-	argB	OKGIIK_09440	0.68	+1.9
2,048,958	-	argB	OKGIIK_09440	0.68	-1.7
2,048,958	-	argB	OKGIIK_09440	0.68	+0.2
2,048,958	-	argB	OKGIIK_09440	0.68	-2.0
2,048,958	-	argB	OKGIIK_09440	0.68	-0.4
2,048,958	-	argB	OKGIIK_09440	0.68	+1.7
2,048,958	-	argB	OKGIIK_09440	0.68	-0.9
2,049,302	+				+0.7
2,049,302	+				+1.5
2,049,302	+				-0.8
2,049,303	-				+1.3
2,049,303	-				+0.3
2,049,303	-				-1.0
2,049,303	-				-0.2
2,049,303	-				+0.3
2,049,303	-				-0.7
2,049,303	-				-0.1
2,049,303	-				+0.5
2,049,385	+				-0.7
2,049,385	+				+0.6
2,049,385	+				+0.9
2,049,385	+				+0.9
2,049,386	-				+0.1
2,049,386	-				-0.3
2,049,386	-				-0.7
2,049,478	+				-0.1
2,049,479	-				-1.0
2,049,479	-				+1.6
2,049,548	-		OKGIIK_09445	0.13	-0.3
2,050,096	+		OKGIIK_09445	0.61	+0.3
2,050,096	+		OKGIIK_09445	0.61	+1.1
2,050,096	+		OKGIIK_09445	0.61	-0.7
2,050,097	-		OKGIIK_09445	0.61	-1.2
2,050,097	-		OKGIIK_09445	0.61	-1.2
2,050,097	-		OKGIIK_09445	0.61	+0.1
2,050,097	-		OKGIIK_09445	0.61	-0.2
2,050,097	-		OKGIIK_09445	0.61	+1.8
2,050,097	-		OKGIIK_09445	0.61	+0.8
2,050,097	-		OKGIIK_09445	0.61	+0.5
2,050,430	+				+0.4
2,050,430	+				-0.7
2,050,430	+				+1.3
2,050,430	+				+0.5
2,050,431	-				-2.4
2,050,431	-				-2.0
2,050,432	+				-0.1
2,050,432	+				-1.9
2,050,432	+				+0.1
2,050,432	+				+0.4
2,050,432	+				+0.3
2,050,432	+				-0.7
2,050,433	-				+0.9
2,050,524	+				+0.8
2,050,524	+				-0.5
2,050,524	+				+1.3
2,050,524	+				-0.1
2,050,525	-				-0.3
2,050,525	-				-2.0
2,050,525	-				-1.9
2,050,525	-				+1.3
2,050,568	+				-0.7
2,050,569	-				+0.8
2,050,569	-				+2.0
2,050,569	-				-0.1
2,050,569	-				-1.5
2,050,569	-				+0.2
2,050,600	+		OKGIIK_09450	0.15	-0.2
2,050,600	+		OKGIIK_09450	0.15	-0.1
2,050,600	+		OKGIIK_09450	0.15	-0.4
2,050,601	-		OKGIIK_09450	0.15	+0.1
2,050,601	-		OKGIIK_09450	0.15	-0.0
2,050,601	-		OKGIIK_09450	0.15	-0.1
2,050,601	-		OKGIIK_09450	0.15	+1.9
2,050,739	+		OKGIIK_09450	0.55	+0.1
2,050,739	+		OKGIIK_09450	0.55	-0.0
2,050,739	+		OKGIIK_09450	0.55	+1.1
2,050,887	+				+0.6
2,050,954	+				-3.0
2,050,954	+				-2.0
2,050,954	+				-0.5
2,050,955	-				-1.9
2,050,955	-				+0.9
2,050,955	-				+0.2
2,050,955	-				-1.7
2,050,955	-				-2.3
2,050,955	-				-0.5
2,050,955	-				+1.3
2,050,955	-				+0.3
2,050,955	-				-1.4
2,050,955	-				-0.3
2,051,023	+		OKGIIK_09455	0.23	-0.6
2,051,023	+		OKGIIK_09455	0.23	+1.5
2,051,024	-		OKGIIK_09455	0.24	-0.1
2,051,221	+		OKGIIK_09455	0.67	+0.3
2,051,221	+		OKGIIK_09455	0.67	-1.8
2,051,221	+		OKGIIK_09455	0.67	-0.4
2,051,221	+		OKGIIK_09455	0.67	-0.5
2,051,222	-		OKGIIK_09455	0.67	+0.9
2,051,222	-		OKGIIK_09455	0.67	+0.7
2,051,222	-		OKGIIK_09455	0.67	-1.0
2,051,290	+		OKGIIK_09455	0.82	+1.6
2,051,291	-		OKGIIK_09455	0.83	-0.0
2,051,291	-		OKGIIK_09455	0.83	-0.2
2,051,291	-		OKGIIK_09455	0.83	-1.3
2,051,291	-		OKGIIK_09455	0.83	-0.2
2,051,363	+				-0.5
2,051,363	+				-0.5
2,051,363	+				-2.2
2,051,364	-				+0.1
2,051,364	-				+0.1
2,051,364	-				-0.2
2,051,364	-				+0.7
2,051,414	+				-0.2
2,051,414	+				+0.1
2,051,414	+				+0.3
2,051,414	+				+1.2
2,051,414	+				-0.1
2,051,414	+				-0.3
2,051,414	+				-0.5
2,051,414	+				-1.2
2,051,414	+				+0.4
2,051,414	+				+0.9
2,051,414	+				+0.7
2,051,414	+				-1.0
2,051,414	+				-1.5
2,051,414	+				-1.0
2,051,415	-				-2.3
2,051,415	-				-0.0
2,051,415	-				+0.7
2,051,415	-				+0.5
2,051,415	-				-1.4
2,051,415	-				-0.7
2,051,415	-				+0.4
2,051,415	-				+0.8
2,051,415	-				-1.3
2,051,415	-				+0.4
2,051,415	-				+0.1
2,051,415	-				-0.1
2,051,415	-				+1.6
2,051,415	-				+0.6
2,051,415	-				-0.4
2,051,418	+		OKGIIK_09460	0.10	-0.7
2,051,418	+		OKGIIK_09460	0.10	+0.3
2,051,418	+		OKGIIK_09460	0.10	+0.1
2,051,418	+		OKGIIK_09460	0.10	+0.3
2,051,418	+		OKGIIK_09460	0.10	+1.3
2,051,419	-		OKGIIK_09460	0.10	-0.1
2,051,419	-		OKGIIK_09460	0.10	-0.5
2,051,419	-		OKGIIK_09460	0.10	+0.3
2,051,419	-		OKGIIK_09460	0.10	-2.2
2,051,419	-		OKGIIK_09460	0.10	-0.9
2,051,419	-		OKGIIK_09460	0.10	-2.5
2,051,490	+		OKGIIK_09460	0.24	+1.1
2,051,490	+		OKGIIK_09460	0.24	+1.1