Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07255

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
1,603,929	-	lapB	OKGIIK_07250	0.25	-2.3
1,604,027	+	lapB	OKGIIK_07250	0.33	-1.7
1,604,027	+	lapB	OKGIIK_07250	0.33	-0.7
1,604,027	+	lapB	OKGIIK_07250	0.33	-2.0
1,604,028	-	lapB	OKGIIK_07250	0.33	-0.7
1,604,028	-	lapB	OKGIIK_07250	0.33	-1.5
1,604,028	-	lapB	OKGIIK_07250	0.33	-0.7
1,604,028	-	lapB	OKGIIK_07250	0.33	-0.7
1,604,028	-	lapB	OKGIIK_07250	0.33	-1.0
1,604,094	-	lapB	OKGIIK_07250	0.39	-0.5
1,604,094	-	lapB	OKGIIK_07250	0.39	-1.3
1,604,161	+	lapB	OKGIIK_07250	0.45	-0.7
1,604,161	+	lapB	OKGIIK_07250	0.45	-2.1
1,604,161	+	lapB	OKGIIK_07250	0.45	-2.0
1,604,161	+	lapB	OKGIIK_07250	0.45	-1.3
1,604,161	+	lapB	OKGIIK_07250	0.45	-1.0
1,604,162	-	lapB	OKGIIK_07250	0.45	-2.7
1,604,162	-	lapB	OKGIIK_07250	0.45	-1.5
1,604,162	-	lapB	OKGIIK_07250	0.45	-1.0
1,604,162	-	lapB	OKGIIK_07250	0.45	-1.5
1,604,162	-	lapB	OKGIIK_07250	0.45	-1.7
1,604,162	-	lapB	OKGIIK_07250	0.45	-2.7
1,604,162	-	lapB	OKGIIK_07250	0.45	-0.1
1,604,162	-	lapB	OKGIIK_07250	0.45	+0.3
1,604,198	+	lapB	OKGIIK_07250	0.48	+0.5
1,604,199	-	lapB	OKGIIK_07250	0.48	-0.6
1,604,255	+	lapB	OKGIIK_07250	0.53	-1.0
1,604,255	+	lapB	OKGIIK_07250	0.53	-1.0
1,604,255	+	lapB	OKGIIK_07250	0.53	-1.3
1,604,256	-	lapB	OKGIIK_07250	0.53	-1.7
1,604,256	-	lapB	OKGIIK_07250	0.53	-0.7
1,604,256	-	lapB	OKGIIK_07250	0.53	-1.0
1,604,256	-	lapB	OKGIIK_07250	0.53	-1.0
1,604,352	-	lapB	OKGIIK_07250	0.61	-1.0
1,604,352	-	lapB	OKGIIK_07250	0.61	-1.0
1,604,352	-	lapB	OKGIIK_07250	0.61	-1.0
1,604,453	+	lapB	OKGIIK_07250	0.70	-1.0
1,604,453	+	lapB	OKGIIK_07250	0.70	-1.5
1,604,453	+	lapB	OKGIIK_07250	0.70	-0.7
1,604,453	+	lapB	OKGIIK_07250	0.70	-2.1
1,604,453	+	lapB	OKGIIK_07250	0.70	-0.0
1,604,453	+	lapB	OKGIIK_07250	0.70	-1.3
1,604,453	+	lapB	OKGIIK_07250	0.70	-1.5
1,604,453	+	lapB	OKGIIK_07250	0.70	-1.1
1,604,453	+	lapB	OKGIIK_07250	0.70	-0.7
1,604,453	+	lapB	OKGIIK_07250	0.70	+0.7
1,604,454	-	lapB	OKGIIK_07250	0.70	-0.7
1,604,454	-	lapB	OKGIIK_07250	0.70	-0.3
1,604,454	-	lapB	OKGIIK_07250	0.70	-1.7
1,604,454	-	lapB	OKGIIK_07250	0.70	-1.0
1,604,454	-	lapB	OKGIIK_07250	0.70	-0.5
1,604,454	-	lapB	OKGIIK_07250	0.70	-0.5
1,604,612	+	lapB	OKGIIK_07250	0.83	-2.3
1,604,612	+	lapB	OKGIIK_07250	0.83	-1.0
1,604,612	+	lapB	OKGIIK_07250	0.83	-0.7
1,604,612	+	lapB	OKGIIK_07250	0.83	+0.1
1,604,613	-	lapB	OKGIIK_07250	0.83	-1.9
1,604,613	-	lapB	OKGIIK_07250	0.83	-0.8
1,604,613	-	lapB	OKGIIK_07250	0.83	-1.3
1,604,613	-	lapB	OKGIIK_07250	0.83	-1.0
1,604,669	+	lapB	OKGIIK_07250	0.88	-1.0
1,604,669	+	lapB	OKGIIK_07250	0.88	-1.3
1,604,669	+	lapB	OKGIIK_07250	0.88	-1.0
1,604,669	+	lapB	OKGIIK_07250	0.88	-1.0
1,604,669	+	lapB	OKGIIK_07250	0.88	-1.0
1,604,670	-	lapB	OKGIIK_07250	0.88	-1.7
1,604,670	-	lapB	OKGIIK_07250	0.88	-1.5
1,604,670	-	lapB	OKGIIK_07250	0.88	-0.0
1,604,687	+	lapB	OKGIIK_07250	0.90	-0.3
1,604,687	+	lapB	OKGIIK_07250	0.90	-1.3
1,604,688	-	lapB	OKGIIK_07250	0.90	-1.3
1,604,795	+				-1.0
1,604,795	+				-2.3
1,604,795	+				-0.7
1,604,795	+				-1.7
1,604,795	+				-1.3
1,604,795	+				-0.7
1,604,795	+				+1.3
1,604,796	-				-1.0
1,604,796	-				-0.2
1,604,796	-				-0.7
1,604,796	-				-0.7
1,604,796	-				-1.9
1,604,796	-				-0.8
1,604,796	-				-1.9
1,604,796	-				-1.7
1,604,796	-				-1.5
1,604,796	-				-1.6
1,604,796	-				-1.3
1,604,974	+		OKGIIK_07255	0.66	-0.0
1,604,974	+		OKGIIK_07255	0.66	-0.3
1,604,975	-		OKGIIK_07255	0.67	-2.7
1,604,975	-		OKGIIK_07255	0.67	-2.5
1,604,975	-		OKGIIK_07255	0.67	-0.0
1,605,070	+				+0.6
1,605,071	-				-2.3
1,605,071	-				-1.5