Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05230

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
1,135,336	-		OKGIIK_05225	0.70	+0.1
1,135,336	-		OKGIIK_05225	0.70	-0.6
1,135,359	+		OKGIIK_05225	0.71	-0.7
1,135,360	-		OKGIIK_05225	0.72	-1.7
1,135,360	-		OKGIIK_05225	0.72	-0.5
1,135,485	+		OKGIIK_05225	0.80	+0.5
1,135,486	-		OKGIIK_05225	0.80	+0.8
1,135,510	+		OKGIIK_05225	0.82	-0.4
1,135,511	-		OKGIIK_05225	0.82	+1.1
1,135,520	-		OKGIIK_05225	0.83	+0.7
1,135,525	+		OKGIIK_05225	0.83	-0.8
1,135,525	+		OKGIIK_05225	0.83	+0.3
1,135,526	-		OKGIIK_05225	0.83	-0.0
1,135,527	+		OKGIIK_05225	0.83	+1.6
1,135,528	-		OKGIIK_05225	0.83	-0.3
1,135,591	+		OKGIIK_05225	0.88	+0.1
1,135,591	+		OKGIIK_05225	0.88	+0.6
1,135,591	+		OKGIIK_05225	0.88	-0.2
1,135,591	+		OKGIIK_05225	0.88	-0.6
1,135,592	-		OKGIIK_05225	0.88	+0.3
1,135,711	+				+1.1
1,135,711	+				+0.5
1,135,712	-				+0.7
1,135,712	-				-0.6
1,135,712	-				-1.2
1,135,763	-				-1.0
1,135,821	+				+1.7
1,135,821	+				+0.4
1,135,821	+				-0.9
1,135,821	+				-0.3
1,135,821	+				-0.0
1,135,821	+				-0.3
1,135,821	+				-0.7
1,135,821	+				+0.7
1,135,821	+				+0.8
1,135,821	+				+1.1
1,135,821	+				-1.5
1,135,821	+				-0.2
1,135,821	+				-0.7
1,135,822	-				-1.0
1,135,822	-				+1.2
1,135,822	-				-0.7
1,135,822	-				-0.6
1,135,822	-				+0.5
1,135,822	-				+0.7
1,135,822	-				-1.9
1,135,822	-				+0.1
1,135,829	+				+0.6
1,135,829	+				+0.9
1,135,830	-				+0.6
1,135,834	-				-0.0
1,135,834	-				-2.0
1,135,897	-				+0.8
1,135,964	+				+0.7
1,136,038	+				-0.5
1,136,038	+				-0.4
1,136,039	-				+0.9
1,136,039	-				-0.2
1,136,039	-				-0.4
1,136,065	-				-0.0
1,136,091	+				-0.7
1,136,121	+				-0.7
1,136,121	+				-0.2
1,136,121	+				+0.4
1,136,121	+				+0.8
1,136,122	-				+0.1
1,136,122	-				-0.3
1,136,155	-				+0.1
1,136,167	+				-0.6
1,136,205	+				+1.3
1,136,206	-				-2.6
1,136,222	-				-1.3
1,136,252	+				+0.8
1,136,252	+				-0.2
1,136,252	+				-0.0
1,136,252	+				+1.1
1,136,252	+				-0.7
1,136,253	-				-2.3
1,136,253	-				+0.4
1,136,253	-				+0.2
1,136,253	-				-1.0
1,136,294	+				-1.3
1,136,360	+		OKGIIK_05230	0.16	-0.5
1,136,360	+		OKGIIK_05230	0.16	-0.5
1,136,360	+		OKGIIK_05230	0.16	-1.3
1,136,360	+		OKGIIK_05230	0.16	+0.3
1,136,360	+		OKGIIK_05230	0.16	+0.1
1,136,361	-		OKGIIK_05230	0.16	-0.2
1,136,381	+		OKGIIK_05230	0.21	-1.0
1,136,381	+		OKGIIK_05230	0.21	-0.2
1,136,381	+		OKGIIK_05230	0.21	-1.2
1,136,382	-		OKGIIK_05230	0.21	+0.5
1,136,423	+		OKGIIK_05230	0.32	-0.9
1,136,423	+		OKGIIK_05230	0.32	-0.1
1,136,424	-		OKGIIK_05230	0.32	-0.1
1,136,424	-		OKGIIK_05230	0.32	+0.8
1,136,424	-		OKGIIK_05230	0.32	-1.1
1,136,424	-		OKGIIK_05230	0.32	-1.5
1,136,424	-		OKGIIK_05230	0.32	-0.0
1,136,424	-		OKGIIK_05230	0.32	-0.4
1,136,424	-		OKGIIK_05230	0.32	+0.8
1,136,424	-		OKGIIK_05230	0.32	-0.7
1,136,426	+		OKGIIK_05230	0.32	-0.7
1,136,427	-		OKGIIK_05230	0.33	-0.0
1,136,442	-		OKGIIK_05230	0.36	-0.3
1,136,442	-		OKGIIK_05230	0.36	-1.5
1,136,468	+		OKGIIK_05230	0.43	+0.9
1,136,468	+		OKGIIK_05230	0.43	+0.7
1,136,468	+		OKGIIK_05230	0.43	+0.9
1,136,469	-		OKGIIK_05230	0.43	+0.3
1,136,477	+		OKGIIK_05230	0.45	+0.3
1,136,478	-		OKGIIK_05230	0.45	-0.2
1,136,478	-		OKGIIK_05230	0.45	+0.2
1,136,636	+		OKGIIK_05230	0.85	-0.7
1,136,636	+		OKGIIK_05230	0.85	+0.3
1,136,636	+		OKGIIK_05230	0.85	+0.8
1,136,636	+		OKGIIK_05230	0.85	+1.1
1,136,637	-		OKGIIK_05230	0.85	+0.7
1,136,637	-		OKGIIK_05230	0.85	+0.8
1,136,637	-		OKGIIK_05230	0.85	-0.3
1,136,637	-		OKGIIK_05230	0.85	-0.1
1,136,678	+				+0.1
1,136,678	+				+1.2
1,136,678	+				-2.0
1,136,679	-				-1.1
1,136,679	-				-1.9
1,136,679	-				-0.7
1,136,704	+				-0.7
1,136,704	+				+1.3
1,136,705	-				+1.2
1,136,712	+				+0.6
1,136,735	+				+0.4
1,136,735	+				-0.0
1,136,735	+				-1.2
1,136,735	+				+0.5
1,136,736	-				+0.0
1,136,757	+				-1.1
1,136,757	+				-1.2
1,136,757	+				-0.7
1,136,757	+				+0.1
1,136,757	+				+0.7
1,136,757	+				+0.7
1,136,757	+				-2.2
1,136,757	+				+0.5
1,136,757	+				-0.6
1,136,757	+				+1.3
1,136,758	-				-0.8
1,136,758	-				-0.7
1,136,758	-				-2.4
1,136,758	-				-0.8
1,136,758	-				-1.0
1,136,759	+				+1.0
1,136,759	+				+1.3
1,136,760	-				+1.0
1,136,760	-				+0.9
1,136,760	-				-0.0
1,136,760	-				+0.9
1,136,855	+				+0.1
1,136,920	+				-0.1
1,136,920	+				-0.1
1,136,920	+				+1.6
1,136,920	+				+0.9
1,136,920	+				+1.0
1,136,921	-				-1.3
1,136,921	-				-1.7
1,136,921	-				+0.4
1,136,921	-				+1.3
1,136,921	-				-0.6
1,136,921	-				+0.3
1,136,921	-				+0.7
1,136,921	-				-0.7
1,136,921	-				+0.4
1,136,921	-				-1.3
1,136,935	+				+0.1
1,136,935	+				+0.5
1,137,010	+				-0.3
1,137,011	-				-0.1
1,137,078	+				+1.1
1,137,078	+				-1.8
1,137,079	-				+0.7
1,137,079	-				-1.9
1,137,079	-				+1.1
1,137,079	-				-0.7
1,137,079	-				-2.2
1,137,121	+				-2.3
1,137,155	+				-0.1
1,137,155	+				-0.2
1,137,155	+				-0.1
1,137,156	-				+0.1
1,137,156	-				-1.7
1,137,156	-				+0.5
1,137,156	-				+0.3
1,137,156	-				+0.2
1,137,173	+				-0.7
1,137,174	-				-0.0
1,137,174	-				-0.1
1,137,197	+				-0.7
1,137,198	-				+1.3
1,137,198	-				-0.8
1,137,198	-				-0.7
1,137,210	+				-0.1
1,137,251	+				-1.3
1,137,252	-				-0.7
1,137,252	-				-0.5
1,137,252	-				+0.1
1,137,252	-				-0.2
1,137,278	+				-0.0
1,137,278	+				-2.0
1,137,278	+				-0.0
1,137,279	-				-0.0
1,137,279	-				-0.9
1,137,317	+				+0.4
1,137,317	+				+1.3
1,137,317	+				+0.8
1,137,317	+				-0.8
1,137,317	+				-0.2
1,137,318	-				+0.2
1,137,318	-				-0.9
1,137,318	-				+0.6
1,137,318	-				+0.0
1,137,318	-				-1.4
1,137,318	-				-2.0
1,137,318	-				+0.7
1,137,323	+				-1.1
1,137,323	+				-0.3
1,137,430	+				+0.5
1,137,485	+				+0.6
1,137,485	+				-0.5
1,137,485	+				-1.3
1,137,485	+				+0.0
1,137,486	-				-0.4
1,137,486	-				-0.0
1,137,486	-				+0.4
1,137,486	-				+1.6
1,137,486	-				-1.3
1,137,486	-				+0.3
1,137,486	-				+0.1
1,137,486	-				-0.2
1,137,640	+		OKGIIK_05235	0.11	+0.0
1,137,671	+		OKGIIK_05235	0.11	+0.6
1,137,671	+		OKGIIK_05235	0.11	+0.2
1,137,671	+		OKGIIK_05235	0.11	-0.5
1,137,671	+		OKGIIK_05235	0.11	+0.2
1,137,671	+		OKGIIK_05235	0.11	-0.5
1,137,672	-		OKGIIK_05235	0.11	-1.4
1,137,672	-		OKGIIK_05235	0.11	+0.1
1,137,672	-		OKGIIK_05235	0.11	+0.2
1,137,674	+		OKGIIK_05235	0.11	-2.2
1,137,674	+		OKGIIK_05235	0.11	-2.0
1,137,674	+		OKGIIK_05235	0.11	-0.5
1,137,674	+		OKGIIK_05235	0.11	-1.3
1,137,674	+		OKGIIK_05235	0.11	+0.3
1,137,674	+		OKGIIK_05235	0.11	+1.6
1,137,674	+		OKGIIK_05235	0.11	-0.5
1,137,674	+		OKGIIK_05235	0.11	+0.3
1,137,674	+		OKGIIK_05235	0.11	+0.1
1,137,674	+		OKGIIK_05235	0.11	+0.3
1,137,674	+		OKGIIK_05235	0.11	-1.2
1,137,675	-		OKGIIK_05235	0.11	-0.7
1,137,675	-		OKGIIK_05235	0.11	+0.5
1,137,675	-		OKGIIK_05235	0.11	-0.3
1,137,675	-		OKGIIK_05235	0.11	+0.1
1,137,675	-		OKGIIK_05235	0.11	-0.3
1,137,675	-		OKGIIK_05235	0.11	-0.7
1,137,677	+		OKGIIK_05235	0.11	+0.2
1,137,677	+		OKGIIK_05235	0.11	-1.7
1,137,677	+		OKGIIK_05235	0.11	-1.7
1,137,677	+		OKGIIK_05235	0.11	-0.2
1,137,677	+		OKGIIK_05235	0.11	-1.7
1,137,677	+		OKGIIK_05235	0.11	+1.0
1,137,677	+		OKGIIK_05235	0.11	-0.3
1,137,678	-		OKGIIK_05235	0.11	-2.6
1,137,678	-		OKGIIK_05235	0.11	-0.3
1,137,678	-		OKGIIK_05235	0.11	+2.8
1,137,678	-		OKGIIK_05235	0.11	-0.8
1,137,678	-		OKGIIK_05235	0.11	+0.7
1,137,678	-		OKGIIK_05235	0.11	+0.1