Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_03230

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_03225 and OKGIIK_03230 are separated by 73 nucleotidesOKGIIK_03230 and OKGIIK_03235 are separated by 133 nucleotides OKGIIK_03225: OKGIIK_03225 - Polysaccharide biosynthesis protein GumN, at 730,287 to 731,153 _03225 OKGIIK_03230: OKGIIK_03230 - hypothetical protein, at 731,227 to 731,472 _03230 OKGIIK_03235: OKGIIK_03235 - IS5 family transposase, at 731,606 to 732,649 _03235 Position (kb) 731 732Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 730.268 kb on + strandat 730.268 kb on + strandat 730.268 kb on + strandat 730.268 kb on + strandat 730.268 kb on + strandat 730.453 kb on + strand, within OKGIIK_03225at 730.453 kb on + strand, within OKGIIK_03225at 730.453 kb on + strand, within OKGIIK_03225at 730.453 kb on + strand, within OKGIIK_03225at 730.453 kb on + strand, within OKGIIK_03225at 730.453 kb on + strand, within OKGIIK_03225at 730.454 kb on - strand, within OKGIIK_03225at 730.454 kb on - strand, within OKGIIK_03225at 730.454 kb on - strand, within OKGIIK_03225at 730.454 kb on - strand, within OKGIIK_03225at 730.454 kb on - strand, within OKGIIK_03225at 730.683 kb on + strand, within OKGIIK_03225at 730.683 kb on + strand, within OKGIIK_03225at 730.684 kb on - strand, within OKGIIK_03225at 730.684 kb on - strand, within OKGIIK_03225at 730.750 kb on - strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.954 kb on + strand, within OKGIIK_03225at 730.955 kb on - strand, within OKGIIK_03225at 730.955 kb on - strand, within OKGIIK_03225at 730.955 kb on - strand, within OKGIIK_03225at 730.955 kb on - strand, within OKGIIK_03225at 730.955 kb on - strand, within OKGIIK_03225at 730.955 kb on - strand, within OKGIIK_03225at 730.955 kb on - strand, within OKGIIK_03225at 730.955 kb on - strand, within OKGIIK_03225at 730.955 kb on - strand, within OKGIIK_03225at 730.955 kb on - strand, within OKGIIK_03225at 731.042 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.044 kb on + strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.045 kb on - strand, within OKGIIK_03225at 731.071 kb on - strandat 731.071 kb on - strandat 731.375 kb on + strand, within OKGIIK_03230at 731.375 kb on + strand, within OKGIIK_03230at 731.375 kb on + strand, within OKGIIK_03230at 731.375 kb on + strand, within OKGIIK_03230at 731.375 kb on + strand, within OKGIIK_03230at 731.376 kb on - strand, within OKGIIK_03230at 731.376 kb on - strand, within OKGIIK_03230at 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.453 kb on + strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.454 kb on - strandat 731.466 kb on + strandat 731.466 kb on + strandat 731.466 kb on + strandat 731.467 kb on - strandat 731.467 kb on - strandat 731.467 kb on - strandat 731.467 kb on - strandat 731.467 kb on - strandat 731.483 kb on - strandat 731.483 kb on - strandat 731.483 kb on - strandat 731.483 kb on - strandat 731.483 kb on - strandat 731.483 kb on - strandat 731.483 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
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730,268 + +0.2
730,268 + -0.5
730,268 + -1.8
730,268 + -1.1
730,268 + -2.1
730,453 + OKGIIK_03225 0.19 -2.3
730,453 + OKGIIK_03225 0.19 +0.2
730,453 + OKGIIK_03225 0.19 -1.9
730,453 + OKGIIK_03225 0.19 -1.4
730,453 + OKGIIK_03225 0.19 -1.1
730,453 + OKGIIK_03225 0.19 -1.9
730,454 - OKGIIK_03225 0.19 +0.9
730,454 - OKGIIK_03225 0.19 -0.1
730,454 - OKGIIK_03225 0.19 -1.1
730,454 - OKGIIK_03225 0.19 -1.7
730,454 - OKGIIK_03225 0.19 -0.2
730,683 + OKGIIK_03225 0.46 -1.3
730,683 + OKGIIK_03225 0.46 -0.7
730,684 - OKGIIK_03225 0.46 -1.4
730,684 - OKGIIK_03225 0.46 +1.9
730,750 - OKGIIK_03225 0.53 +0.5
730,954 + OKGIIK_03225 0.77 -0.4
730,954 + OKGIIK_03225 0.77 +1.7
730,954 + OKGIIK_03225 0.77 -3.0
730,954 + OKGIIK_03225 0.77 -0.8
730,954 + OKGIIK_03225 0.77 -1.7
730,954 + OKGIIK_03225 0.77 -0.5
730,954 + OKGIIK_03225 0.77 +0.7
730,954 + OKGIIK_03225 0.77 -2.2
730,954 + OKGIIK_03225 0.77 +0.1
730,954 + OKGIIK_03225 0.77 -0.2
730,954 + OKGIIK_03225 0.77 -2.1
730,954 + OKGIIK_03225 0.77 -0.5
730,954 + OKGIIK_03225 0.77 +0.9
730,954 + OKGIIK_03225 0.77 -1.9
730,954 + OKGIIK_03225 0.77 +2.1
730,954 + OKGIIK_03225 0.77 -0.1
730,954 + OKGIIK_03225 0.77 -3.7
730,955 - OKGIIK_03225 0.77 -0.8
730,955 - OKGIIK_03225 0.77 -0.8
730,955 - OKGIIK_03225 0.77 -1.4
730,955 - OKGIIK_03225 0.77 -1.1
730,955 - OKGIIK_03225 0.77 -0.1
730,955 - OKGIIK_03225 0.77 +0.3
730,955 - OKGIIK_03225 0.77 -0.9
730,955 - OKGIIK_03225 0.77 +0.3
730,955 - OKGIIK_03225 0.77 -0.6
730,955 - OKGIIK_03225 0.77 -0.1
731,042 + OKGIIK_03225 0.87 -0.4
731,044 + OKGIIK_03225 0.87 -2.3
731,044 + OKGIIK_03225 0.87 -1.3
731,044 + OKGIIK_03225 0.87 -0.2
731,044 + OKGIIK_03225 0.87 -0.1
731,044 + OKGIIK_03225 0.87 -2.4
731,044 + OKGIIK_03225 0.87 -2.8
731,044 + OKGIIK_03225 0.87 -0.2
731,044 + OKGIIK_03225 0.87 -0.9
731,044 + OKGIIK_03225 0.87 -1.7
731,044 + OKGIIK_03225 0.87 -0.7
731,044 + OKGIIK_03225 0.87 -0.4
731,044 + OKGIIK_03225 0.87 -0.0
731,044 + OKGIIK_03225 0.87 -1.0
731,044 + OKGIIK_03225 0.87 -0.7
731,044 + OKGIIK_03225 0.87 -1.1
731,045 - OKGIIK_03225 0.87 -1.7
731,045 - OKGIIK_03225 0.87 -0.1
731,045 - OKGIIK_03225 0.87 -2.7
731,045 - OKGIIK_03225 0.87 +1.9
731,045 - OKGIIK_03225 0.87 -1.6
731,045 - OKGIIK_03225 0.87 -3.1
731,045 - OKGIIK_03225 0.87 +0.5
731,045 - OKGIIK_03225 0.87 -0.4
731,045 - OKGIIK_03225 0.87 -1.0
731,045 - OKGIIK_03225 0.87 +0.1
731,045 - OKGIIK_03225 0.87 +0.3
731,045 - OKGIIK_03225 0.87 +0.5
731,071 - -0.4
731,071 - +0.9
731,375 + OKGIIK_03230 0.60 -1.9
731,375 + OKGIIK_03230 0.60 -1.1
731,375 + OKGIIK_03230 0.60 +0.0
731,375 + OKGIIK_03230 0.60 -2.3
731,375 + OKGIIK_03230 0.60 +0.9
731,376 - OKGIIK_03230 0.61 -1.9
731,376 - OKGIIK_03230 0.61 -1.5
731,453 + -0.3
731,453 + -0.1
731,453 + -1.1
731,453 + -2.7
731,453 + +2.1
731,453 + -2.3
731,453 + -1.2
731,453 + -0.4
731,453 + -0.3
731,453 + +0.4
731,453 + -1.4
731,453 + +1.7
731,453 + +0.2
731,453 + -0.9
731,454 - -1.9
731,454 - -0.5
731,454 - -2.9
731,454 - +0.5
731,454 - -1.7
731,454 - -1.0
731,454 - -0.9
731,454 - -1.5
731,454 - -1.2
731,454 - -0.5
731,454 - -1.1
731,454 - -0.9
731,454 - -0.2
731,454 - -0.7
731,454 - -1.0
731,466 + +1.2
731,466 + -1.4
731,466 + -0.8
731,467 - -1.7
731,467 - +0.4
731,467 - -0.1
731,467 - -0.9
731,467 - -0.5
731,483 - -0.1
731,483 - -0.3
731,483 - -0.1
731,483 - +0.4
731,483 - -0.2
731,483 - +1.3
731,483 - -1.3

Or see this region's nucleotide sequence