Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06509 and MPMX19_06510 overlap by 4 nucleotides MPMX19_06510 and MPMX19_06511 are separated by 88 nucleotides MPMX19_06511 and MPMX19_06512 overlap by 1 nucleotides
MPMX19_06509: MPMX19_06509 - Putative aliphatic sulfonates transport permease protein SsuC, at 293,545 to 294,420
_06509
MPMX19_06510: MPMX19_06510 - Aliphatic sulfonates import ATP-binding protein SsuB, at 294,417 to 295,142
_06510
MPMX19_06511: MPMX19_06511 - hypothetical protein, at 295,231 to 296,271
_06511
MPMX19_06512: MPMX19_06512 - Dimethyl sulfoxide/trimethylamine N-oxide reductase, at 296,271 to 298,571
_06512
Position (kb)
295
296
297 Strain fitness (log2 ratio)
-2
-1
0
1 at 294.328 kb on + strand, within MPMX19_06509 at 294.328 kb on + strand, within MPMX19_06509 at 294.328 kb on + strand, within MPMX19_06509 at 294.328 kb on + strand, within MPMX19_06509 at 294.328 kb on + strand, within MPMX19_06509 at 294.328 kb on + strand, within MPMX19_06509 at 294.360 kb on - strand at 294.403 kb on + strand at 294.404 kb on - strand at 294.404 kb on - strand at 294.404 kb on - strand at 294.404 kb on - strand at 294.442 kb on + strand at 294.442 kb on + strand at 294.442 kb on + strand at 294.442 kb on + strand at 294.443 kb on - strand at 294.443 kb on - strand at 294.443 kb on - strand at 294.495 kb on + strand, within MPMX19_06510 at 294.495 kb on + strand, within MPMX19_06510 at 294.496 kb on - strand, within MPMX19_06510 at 294.496 kb on - strand, within MPMX19_06510 at 294.496 kb on - strand, within MPMX19_06510 at 294.496 kb on - strand, within MPMX19_06510 at 294.712 kb on + strand, within MPMX19_06510 at 294.712 kb on + strand, within MPMX19_06510 at 295.346 kb on + strand, within MPMX19_06511 at 295.347 kb on - strand, within MPMX19_06511 at 295.396 kb on - strand, within MPMX19_06511 at 295.396 kb on - strand, within MPMX19_06511 at 295.640 kb on - strand, within MPMX19_06511 at 295.808 kb on - strand, within MPMX19_06511 at 295.808 kb on - strand, within MPMX19_06511 at 295.904 kb on - strand, within MPMX19_06511 at 295.904 kb on - strand, within MPMX19_06511 at 295.904 kb on - strand, within MPMX19_06511 at 295.904 kb on - strand, within MPMX19_06511 at 295.904 kb on - strand, within MPMX19_06511 at 295.904 kb on - strand, within MPMX19_06511 at 295.966 kb on + strand, within MPMX19_06511 at 295.966 kb on + strand, within MPMX19_06511 at 295.966 kb on + strand, within MPMX19_06511 at 295.966 kb on + strand, within MPMX19_06511 at 295.966 kb on + strand, within MPMX19_06511 at 295.966 kb on + strand, within MPMX19_06511 at 295.966 kb on + strand, within MPMX19_06511 at 295.966 kb on + strand, within MPMX19_06511 at 295.966 kb on + strand, within MPMX19_06511 at 295.966 kb on + strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 295.967 kb on - strand, within MPMX19_06511 at 296.313 kb on + strand at 296.602 kb on - strand, within MPMX19_06512 at 296.602 kb on - strand, within MPMX19_06512 at 296.602 kb on - strand, within MPMX19_06512 at 296.602 kb on - strand, within MPMX19_06512 at 296.677 kb on - strand, within MPMX19_06512 at 296.679 kb on - strand, within MPMX19_06512 at 296.679 kb on - strand, within MPMX19_06512 at 296.679 kb on - strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.756 kb on + strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 296.757 kb on - strand, within MPMX19_06512 at 297.099 kb on + strand, within MPMX19_06512 at 297.099 kb on + strand, within MPMX19_06512 at 297.100 kb on - strand, within MPMX19_06512 at 297.100 kb on - strand, within MPMX19_06512
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 294,328 + MPMX19_06509 0.89 -0.2 294,328 + MPMX19_06509 0.89 +0.3 294,328 + MPMX19_06509 0.89 +0.3 294,328 + MPMX19_06509 0.89 +0.3 294,328 + MPMX19_06509 0.89 +1.2 294,328 + MPMX19_06509 0.89 +1.0 294,360 - -0.1 294,403 + -0.2 294,404 - -1.0 294,404 - +0.2 294,404 - -0.8 294,404 - -0.3 294,442 + -0.3 294,442 + -0.1 294,442 + -0.1 294,442 + -0.3 294,443 - +0.9 294,443 - +0.1 294,443 - -1.3 294,495 + MPMX19_06510 0.11 +0.5 294,495 + MPMX19_06510 0.11 -0.4 294,496 - MPMX19_06510 0.11 +0.6 294,496 - MPMX19_06510 0.11 +0.6 294,496 - MPMX19_06510 0.11 -0.4 294,496 - MPMX19_06510 0.11 +0.6 294,712 + MPMX19_06510 0.41 -0.7 294,712 + MPMX19_06510 0.41 +0.0 295,346 + MPMX19_06511 0.11 +0.0 295,347 - MPMX19_06511 0.11 +0.7 295,396 - MPMX19_06511 0.16 -0.7 295,396 - MPMX19_06511 0.16 -0.5 295,640 - MPMX19_06511 0.39 +0.4 295,808 - MPMX19_06511 0.55 -0.7 295,808 - MPMX19_06511 0.55 -1.4 295,904 - MPMX19_06511 0.65 -0.2 295,904 - MPMX19_06511 0.65 +1.3 295,904 - MPMX19_06511 0.65 -0.1 295,904 - MPMX19_06511 0.65 +0.1 295,904 - MPMX19_06511 0.65 +0.3 295,904 - MPMX19_06511 0.65 +0.0 295,966 + MPMX19_06511 0.71 +0.9 295,966 + MPMX19_06511 0.71 +0.4 295,966 + MPMX19_06511 0.71 +0.8 295,966 + MPMX19_06511 0.71 +0.5 295,966 + MPMX19_06511 0.71 +1.0 295,966 + MPMX19_06511 0.71 -0.6 295,966 + MPMX19_06511 0.71 -1.4 295,966 + MPMX19_06511 0.71 -0.1 295,966 + MPMX19_06511 0.71 -0.2 295,966 + MPMX19_06511 0.71 -1.1 295,967 - MPMX19_06511 0.71 +0.9 295,967 - MPMX19_06511 0.71 +0.6 295,967 - MPMX19_06511 0.71 -0.6 295,967 - MPMX19_06511 0.71 -0.4 295,967 - MPMX19_06511 0.71 +0.0 295,967 - MPMX19_06511 0.71 -1.4 295,967 - MPMX19_06511 0.71 +0.6 295,967 - MPMX19_06511 0.71 +0.0 295,967 - MPMX19_06511 0.71 -0.8 295,967 - MPMX19_06511 0.71 -0.3 295,967 - MPMX19_06511 0.71 -0.2 295,967 - MPMX19_06511 0.71 +0.8 295,967 - MPMX19_06511 0.71 -1.1 295,967 - MPMX19_06511 0.71 -1.2 296,313 + -0.7 296,602 - MPMX19_06512 0.14 -0.8 296,602 - MPMX19_06512 0.14 -0.4 296,602 - MPMX19_06512 0.14 +0.2 296,602 - MPMX19_06512 0.14 +0.0 296,677 - MPMX19_06512 0.18 -0.4 296,679 - MPMX19_06512 0.18 -1.5 296,679 - MPMX19_06512 0.18 +0.0 296,679 - MPMX19_06512 0.18 -0.2 296,756 + MPMX19_06512 0.21 -0.3 296,756 + MPMX19_06512 0.21 -1.8 296,756 + MPMX19_06512 0.21 -1.1 296,756 + MPMX19_06512 0.21 -0.2 296,756 + MPMX19_06512 0.21 +0.2 296,756 + MPMX19_06512 0.21 -0.4 296,756 + MPMX19_06512 0.21 -0.2 296,756 + MPMX19_06512 0.21 -0.7 296,756 + MPMX19_06512 0.21 -1.2 296,756 + MPMX19_06512 0.21 +1.2 296,756 + MPMX19_06512 0.21 -0.1 296,756 + MPMX19_06512 0.21 +0.7 296,756 + MPMX19_06512 0.21 -1.0 296,756 + MPMX19_06512 0.21 +1.3 296,756 + MPMX19_06512 0.21 -0.1 296,756 + MPMX19_06512 0.21 +1.1 296,756 + MPMX19_06512 0.21 -0.2 296,756 + MPMX19_06512 0.21 -0.4 296,756 + MPMX19_06512 0.21 -1.5 296,756 + MPMX19_06512 0.21 +0.7 296,756 + MPMX19_06512 0.21 +0.4 296,756 + MPMX19_06512 0.21 +0.3 296,756 + MPMX19_06512 0.21 +0.4 296,756 + MPMX19_06512 0.21 +1.0 296,756 + MPMX19_06512 0.21 -0.4 296,756 + MPMX19_06512 0.21 -0.9 296,756 + MPMX19_06512 0.21 -0.5 296,756 + MPMX19_06512 0.21 -0.8 296,756 + MPMX19_06512 0.21 -0.1 296,757 - MPMX19_06512 0.21 -0.1 296,757 - MPMX19_06512 0.21 +0.1 296,757 - MPMX19_06512 0.21 -0.1 296,757 - MPMX19_06512 0.21 -1.0 296,757 - MPMX19_06512 0.21 -0.5 296,757 - MPMX19_06512 0.21 -0.8 296,757 - MPMX19_06512 0.21 -1.3 296,757 - MPMX19_06512 0.21 -1.0 296,757 - MPMX19_06512 0.21 -0.7 296,757 - MPMX19_06512 0.21 +0.2 296,757 - MPMX19_06512 0.21 +0.9 296,757 - MPMX19_06512 0.21 -0.3 296,757 - MPMX19_06512 0.21 -0.3 296,757 - MPMX19_06512 0.21 +0.4 296,757 - MPMX19_06512 0.21 +0.6 296,757 - MPMX19_06512 0.21 +1.2 296,757 - MPMX19_06512 0.21 -0.8 296,757 - MPMX19_06512 0.21 +0.2 296,757 - MPMX19_06512 0.21 +0.3 296,757 - MPMX19_06512 0.21 -0.6 296,757 - MPMX19_06512 0.21 -1.0 296,757 - MPMX19_06512 0.21 +0.2 296,757 - MPMX19_06512 0.21 -0.9 296,757 - MPMX19_06512 0.21 -0.4 296,757 - MPMX19_06512 0.21 -1.5 296,757 - MPMX19_06512 0.21 -0.1 296,757 - MPMX19_06512 0.21 -0.4 296,757 - MPMX19_06512 0.21 -1.9 297,099 + MPMX19_06512 0.36 +0.6 297,099 + MPMX19_06512 0.36 +0.1 297,100 - MPMX19_06512 0.36 -0.7 297,100 - MPMX19_06512 0.36 -0.7
Or see this region's nucleotide sequence