Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04934 and MPMX19_04935 are separated by 213 nucleotides MPMX19_04935 and MPMX19_04936 are separated by 17 nucleotides
MPMX19_04934: MPMX19_04934 - hypothetical protein, at 395,547 to 396,572
_04934
MPMX19_04935: MPMX19_04935 - Beta-glucosidase A, at 396,786 to 398,114
_04935
MPMX19_04936: MPMX19_04936 - Urocanate hydratase, at 398,132 to 399,814
_04936
Position (kb) 396
397
398
399 Strain fitness (log2 ratio) -2
-1
0
1
2 at 395.921 kb on + strand, within MPMX19_04934 at 395.921 kb on + strand, within MPMX19_04934 at 396.157 kb on + strand, within MPMX19_04934 at 396.157 kb on + strand, within MPMX19_04934 at 396.157 kb on + strand, within MPMX19_04934 at 396.158 kb on - strand, within MPMX19_04934 at 396.158 kb on - strand, within MPMX19_04934 at 396.388 kb on + strand, within MPMX19_04934 at 396.388 kb on + strand, within MPMX19_04934 at 396.389 kb on - strand, within MPMX19_04934 at 396.389 kb on - strand, within MPMX19_04934 at 396.389 kb on - strand, within MPMX19_04934 at 396.389 kb on - strand, within MPMX19_04934 at 396.389 kb on - strand, within MPMX19_04934 at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.665 kb on + strand at 396.665 kb on + strand at 396.665 kb on + strand at 396.676 kb on + strand at 396.676 kb on + strand at 396.676 kb on + strand at 396.676 kb on + strand at 396.676 kb on + strand at 396.676 kb on + strand at 396.676 kb on + strand at 396.676 kb on + strand at 396.677 kb on - strand at 396.677 kb on - strand at 396.677 kb on - strand at 396.677 kb on - strand at 396.677 kb on - strand at 396.677 kb on - strand at 396.677 kb on - strand at 396.677 kb on - strand at 396.677 kb on - strand at 396.843 kb on + strand at 396.843 kb on + strand at 396.844 kb on - strand at 396.960 kb on + strand, within MPMX19_04935 at 397.014 kb on + strand, within MPMX19_04935 at 397.089 kb on + strand, within MPMX19_04935 at 397.089 kb on + strand, within MPMX19_04935 at 397.089 kb on + strand, within MPMX19_04935 at 397.089 kb on + strand, within MPMX19_04935 at 397.089 kb on + strand, within MPMX19_04935 at 397.090 kb on - strand, within MPMX19_04935 at 397.146 kb on + strand, within MPMX19_04935 at 397.146 kb on + strand, within MPMX19_04935 at 397.146 kb on + strand, within MPMX19_04935 at 397.146 kb on + strand, within MPMX19_04935 at 397.146 kb on + strand, within MPMX19_04935 at 397.147 kb on - strand, within MPMX19_04935 at 397.224 kb on + strand, within MPMX19_04935 at 397.225 kb on - strand, within MPMX19_04935 at 397.564 kb on - strand, within MPMX19_04935 at 397.564 kb on - strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.596 kb on + strand, within MPMX19_04935 at 397.597 kb on - strand, within MPMX19_04935 at 397.597 kb on - strand, within MPMX19_04935 at 397.597 kb on - strand, within MPMX19_04935 at 397.597 kb on - strand, within MPMX19_04935 at 397.597 kb on - strand, within MPMX19_04935 at 397.597 kb on - strand, within MPMX19_04935 at 397.597 kb on - strand, within MPMX19_04935 at 397.597 kb on - strand, within MPMX19_04935 at 397.597 kb on - strand, within MPMX19_04935 at 397.659 kb on + strand, within MPMX19_04935 at 397.659 kb on + strand, within MPMX19_04935 at 397.671 kb on + strand, within MPMX19_04935 at 397.672 kb on - strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.821 kb on + strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.822 kb on - strand, within MPMX19_04935 at 397.905 kb on + strand, within MPMX19_04935 at 397.906 kb on - strand, within MPMX19_04935 at 397.917 kb on + strand, within MPMX19_04935 at 397.917 kb on + strand, within MPMX19_04935 at 397.917 kb on + strand, within MPMX19_04935 at 397.917 kb on + strand, within MPMX19_04935 at 397.918 kb on - strand, within MPMX19_04935 at 397.918 kb on - strand, within MPMX19_04935 at 397.918 kb on - strand, within MPMX19_04935 at 397.918 kb on - strand, within MPMX19_04935 at 397.918 kb on - strand, within MPMX19_04935 at 397.918 kb on - strand, within MPMX19_04935 at 397.969 kb on - strand, within MPMX19_04935 at 397.969 kb on - strand, within MPMX19_04935 at 397.969 kb on - strand, within MPMX19_04935 at 398.013 kb on + strand at 398.013 kb on + strand at 398.088 kb on + strand at 398.088 kb on + strand at 398.089 kb on - strand at 398.133 kb on + strand at 398.133 kb on + strand at 398.133 kb on + strand at 398.133 kb on + strand at 398.133 kb on + strand at 398.133 kb on + strand at 398.133 kb on + strand at 398.134 kb on - strand at 398.134 kb on - strand at 398.134 kb on - strand at 398.134 kb on - strand at 398.134 kb on - strand at 398.134 kb on - strand at 398.134 kb on - strand at 398.134 kb on - strand at 398.134 kb on - strand at 398.134 kb on - strand at 398.134 kb on - strand at 398.134 kb on - strand at 398.191 kb on - strand at 398.680 kb on + strand, within MPMX19_04936 at 398.680 kb on + strand, within MPMX19_04936 at 398.681 kb on - strand, within MPMX19_04936 at 398.681 kb on - strand, within MPMX19_04936 at 398.681 kb on - strand, within MPMX19_04936 at 398.681 kb on - strand, within MPMX19_04936 at 398.755 kb on + strand, within MPMX19_04936 at 398.757 kb on + strand, within MPMX19_04936 at 398.757 kb on + strand, within MPMX19_04936 at 398.757 kb on + strand, within MPMX19_04936 at 398.757 kb on + strand, within MPMX19_04936 at 398.757 kb on + strand, within MPMX19_04936 at 398.757 kb on + strand, within MPMX19_04936 at 398.757 kb on + strand, within MPMX19_04936 at 398.757 kb on + strand, within MPMX19_04936 at 398.757 kb on + strand, within MPMX19_04936 at 398.757 kb on + strand, within MPMX19_04936 at 398.758 kb on - strand, within MPMX19_04936 at 398.758 kb on - strand, within MPMX19_04936 at 398.758 kb on - strand, within MPMX19_04936 at 398.758 kb on - strand, within MPMX19_04936 at 398.758 kb on - strand, within MPMX19_04936 at 398.758 kb on - strand, within MPMX19_04936 at 398.835 kb on + strand, within MPMX19_04936 at 398.836 kb on - strand, within MPMX19_04936 at 398.982 kb on + strand, within MPMX19_04936 at 398.982 kb on + strand, within MPMX19_04936 at 398.982 kb on + strand, within MPMX19_04936 at 398.983 kb on - strand, within MPMX19_04936
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 395,921 + MPMX19_04934 0.36 -1.5 395,921 + MPMX19_04934 0.36 -0.6 396,157 + MPMX19_04934 0.59 -0.7 396,157 + MPMX19_04934 0.59 -0.2 396,157 + MPMX19_04934 0.59 -0.4 396,158 - MPMX19_04934 0.60 -0.9 396,158 - MPMX19_04934 0.60 +0.4 396,388 + MPMX19_04934 0.82 -1.6 396,388 + MPMX19_04934 0.82 +0.0 396,389 - MPMX19_04934 0.82 -0.3 396,389 - MPMX19_04934 0.82 -0.4 396,389 - MPMX19_04934 0.82 -0.9 396,389 - MPMX19_04934 0.82 -0.0 396,389 - MPMX19_04934 0.82 -1.8 396,621 + -0.1 396,621 + -0.3 396,621 + +0.5 396,621 + -0.3 396,621 + +0.1 396,621 + +0.8 396,621 + +0.2 396,621 + -1.4 396,621 + -0.6 396,621 + -1.1 396,621 + -0.8 396,621 + -0.1 396,621 + -0.4 396,621 + -1.0 396,621 + +0.4 396,621 + -1.4 396,621 + -1.3 396,622 - -0.7 396,622 - +0.1 396,622 - +1.7 396,622 - +0.2 396,622 - +0.2 396,622 - -0.0 396,622 - +0.2 396,622 - +0.3 396,622 - -0.3 396,622 - -1.6 396,665 + -0.2 396,665 + +0.6 396,665 + -0.9 396,676 + -0.9 396,676 + -1.5 396,676 + -0.4 396,676 + +0.9 396,676 + -0.1 396,676 + -2.4 396,676 + -0.7 396,676 + -1.4 396,677 - -2.3 396,677 - +1.2 396,677 - -0.9 396,677 - +0.1 396,677 - -0.0 396,677 - -0.1 396,677 - +2.6 396,677 - -2.4 396,677 - -1.1 396,843 + +1.0 396,843 + -1.8 396,844 - -0.0 396,960 + MPMX19_04935 0.13 -0.2 397,014 + MPMX19_04935 0.17 -1.1 397,089 + MPMX19_04935 0.23 -0.0 397,089 + MPMX19_04935 0.23 -0.4 397,089 + MPMX19_04935 0.23 -0.3 397,089 + MPMX19_04935 0.23 -0.1 397,089 + MPMX19_04935 0.23 -0.8 397,090 - MPMX19_04935 0.23 -0.3 397,146 + MPMX19_04935 0.27 -0.9 397,146 + MPMX19_04935 0.27 -0.6 397,146 + MPMX19_04935 0.27 -0.2 397,146 + MPMX19_04935 0.27 -1.1 397,146 + MPMX19_04935 0.27 -0.9 397,147 - MPMX19_04935 0.27 -1.3 397,224 + MPMX19_04935 0.33 -0.4 397,225 - MPMX19_04935 0.33 -1.4 397,564 - MPMX19_04935 0.59 -0.4 397,564 - MPMX19_04935 0.59 -0.3 397,596 + MPMX19_04935 0.61 +1.0 397,596 + MPMX19_04935 0.61 +0.2 397,596 + MPMX19_04935 0.61 +0.4 397,596 + MPMX19_04935 0.61 -0.3 397,596 + MPMX19_04935 0.61 -0.4 397,596 + MPMX19_04935 0.61 -1.0 397,596 + MPMX19_04935 0.61 -0.4 397,596 + MPMX19_04935 0.61 -1.0 397,596 + MPMX19_04935 0.61 -0.6 397,596 + MPMX19_04935 0.61 +0.1 397,596 + MPMX19_04935 0.61 +0.0 397,596 + MPMX19_04935 0.61 +0.4 397,597 - MPMX19_04935 0.61 -0.0 397,597 - MPMX19_04935 0.61 -0.0 397,597 - MPMX19_04935 0.61 -1.0 397,597 - MPMX19_04935 0.61 -1.7 397,597 - MPMX19_04935 0.61 -0.4 397,597 - MPMX19_04935 0.61 -0.5 397,597 - MPMX19_04935 0.61 -0.0 397,597 - MPMX19_04935 0.61 -0.3 397,597 - MPMX19_04935 0.61 -0.0 397,659 + MPMX19_04935 0.66 -1.9 397,659 + MPMX19_04935 0.66 -0.6 397,671 + MPMX19_04935 0.67 +0.3 397,672 - MPMX19_04935 0.67 -0.0 397,821 + MPMX19_04935 0.78 -0.7 397,821 + MPMX19_04935 0.78 -1.4 397,821 + MPMX19_04935 0.78 -1.0 397,821 + MPMX19_04935 0.78 -1.9 397,821 + MPMX19_04935 0.78 -0.4 397,821 + MPMX19_04935 0.78 +0.8 397,821 + MPMX19_04935 0.78 -1.3 397,821 + MPMX19_04935 0.78 +1.0 397,821 + MPMX19_04935 0.78 -0.2 397,821 + MPMX19_04935 0.78 +1.0 397,821 + MPMX19_04935 0.78 +0.1 397,821 + MPMX19_04935 0.78 -0.9 397,821 + MPMX19_04935 0.78 -0.0 397,821 + MPMX19_04935 0.78 +0.8 397,821 + MPMX19_04935 0.78 -0.0 397,821 + MPMX19_04935 0.78 -0.3 397,821 + MPMX19_04935 0.78 -1.1 397,821 + MPMX19_04935 0.78 -0.4 397,821 + MPMX19_04935 0.78 -0.5 397,822 - MPMX19_04935 0.78 +0.9 397,822 - MPMX19_04935 0.78 +0.3 397,822 - MPMX19_04935 0.78 +0.9 397,822 - MPMX19_04935 0.78 -2.6 397,822 - MPMX19_04935 0.78 -0.6 397,822 - MPMX19_04935 0.78 -0.7 397,822 - MPMX19_04935 0.78 -0.4 397,822 - MPMX19_04935 0.78 -1.0 397,822 - MPMX19_04935 0.78 -1.1 397,822 - MPMX19_04935 0.78 +0.3 397,822 - MPMX19_04935 0.78 -1.6 397,822 - MPMX19_04935 0.78 -0.4 397,822 - MPMX19_04935 0.78 -0.2 397,822 - MPMX19_04935 0.78 -1.0 397,905 + MPMX19_04935 0.84 -0.3 397,906 - MPMX19_04935 0.84 +0.2 397,917 + MPMX19_04935 0.85 -0.2 397,917 + MPMX19_04935 0.85 +0.0 397,917 + MPMX19_04935 0.85 -1.0 397,917 + MPMX19_04935 0.85 -0.9 397,918 - MPMX19_04935 0.85 -0.2 397,918 - MPMX19_04935 0.85 -0.8 397,918 - MPMX19_04935 0.85 -0.0 397,918 - MPMX19_04935 0.85 -0.6 397,918 - MPMX19_04935 0.85 -0.8 397,918 - MPMX19_04935 0.85 -0.6 397,969 - MPMX19_04935 0.89 -1.0 397,969 - MPMX19_04935 0.89 -0.3 397,969 - MPMX19_04935 0.89 -0.8 398,013 + -0.8 398,013 + -0.4 398,088 + +0.1 398,088 + +1.3 398,089 - -1.0 398,133 + +0.3 398,133 + -1.8 398,133 + +0.7 398,133 + -0.4 398,133 + +0.0 398,133 + -0.9 398,133 + -0.6 398,134 - -0.0 398,134 - -0.2 398,134 - -0.6 398,134 - +0.4 398,134 - -0.7 398,134 - -1.1 398,134 - +0.2 398,134 - +0.4 398,134 - -0.6 398,134 - -0.5 398,134 - -0.2 398,134 - -0.7 398,191 - -1.7 398,680 + MPMX19_04936 0.33 +0.1 398,680 + MPMX19_04936 0.33 -0.6 398,681 - MPMX19_04936 0.33 -1.3 398,681 - MPMX19_04936 0.33 -0.5 398,681 - MPMX19_04936 0.33 -0.0 398,681 - MPMX19_04936 0.33 -0.4 398,755 + MPMX19_04936 0.37 -0.6 398,757 + MPMX19_04936 0.37 -2.0 398,757 + MPMX19_04936 0.37 +0.9 398,757 + MPMX19_04936 0.37 -0.8 398,757 + MPMX19_04936 0.37 -1.9 398,757 + MPMX19_04936 0.37 -0.9 398,757 + MPMX19_04936 0.37 -0.3 398,757 + MPMX19_04936 0.37 -1.1 398,757 + MPMX19_04936 0.37 -0.6 398,757 + MPMX19_04936 0.37 -1.3 398,757 + MPMX19_04936 0.37 +0.6 398,758 - MPMX19_04936 0.37 -1.1 398,758 - MPMX19_04936 0.37 +0.6 398,758 - MPMX19_04936 0.37 -0.0 398,758 - MPMX19_04936 0.37 +0.2 398,758 - MPMX19_04936 0.37 -0.7 398,758 - MPMX19_04936 0.37 +1.1 398,835 + MPMX19_04936 0.42 +0.5 398,836 - MPMX19_04936 0.42 -1.3 398,982 + MPMX19_04936 0.51 -0.0 398,982 + MPMX19_04936 0.51 -0.0 398,982 + MPMX19_04936 0.51 -1.0 398,983 - MPMX19_04936 0.51 +0.4
Or see this region's nucleotide sequence