Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04420 and MPMX19_04421 are separated by 84 nucleotides MPMX19_04421 and MPMX19_04422 are separated by 7 nucleotides MPMX19_04422 and MPMX19_04423 are separated by 223 nucleotides
MPMX19_04420: MPMX19_04420 - hypothetical protein, at 783,987 to 784,937
_04420
MPMX19_04421: MPMX19_04421 - Chitooligosaccharide deacetylase ChbG, at 785,022 to 785,897
_04421
MPMX19_04422: MPMX19_04422 - Benzoate--CoA ligase, at 785,905 to 787,671
_04422
MPMX19_04423: MPMX19_04423 - hypothetical protein, at 787,895 to 788,398
_04423
Position (kb) 785
786
787
788 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 785.067 kb on + strand at 785.067 kb on + strand at 785.068 kb on - strand at 785.068 kb on - strand at 785.314 kb on - strand, within MPMX19_04421 at 785.415 kb on + strand, within MPMX19_04421 at 785.415 kb on + strand, within MPMX19_04421 at 785.415 kb on + strand, within MPMX19_04421 at 785.415 kb on + strand, within MPMX19_04421 at 785.415 kb on + strand, within MPMX19_04421 at 785.415 kb on + strand, within MPMX19_04421 at 785.416 kb on - strand, within MPMX19_04421 at 785.416 kb on - strand, within MPMX19_04421 at 785.416 kb on - strand, within MPMX19_04421 at 785.416 kb on - strand, within MPMX19_04421 at 785.416 kb on - strand, within MPMX19_04421 at 785.416 kb on - strand, within MPMX19_04421 at 785.416 kb on - strand, within MPMX19_04421 at 785.416 kb on - strand, within MPMX19_04421 at 785.416 kb on - strand, within MPMX19_04421 at 785.417 kb on + strand, within MPMX19_04421 at 785.417 kb on + strand, within MPMX19_04421 at 785.418 kb on - strand, within MPMX19_04421 at 785.418 kb on - strand, within MPMX19_04421 at 785.418 kb on - strand, within MPMX19_04421 at 785.418 kb on - strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.499 kb on + strand, within MPMX19_04421 at 785.500 kb on - strand, within MPMX19_04421 at 785.500 kb on - strand, within MPMX19_04421 at 785.500 kb on - strand, within MPMX19_04421 at 785.500 kb on - strand, within MPMX19_04421 at 785.500 kb on - strand, within MPMX19_04421 at 785.500 kb on - strand, within MPMX19_04421 at 785.500 kb on - strand, within MPMX19_04421 at 785.649 kb on + strand, within MPMX19_04421 at 785.649 kb on + strand, within MPMX19_04421 at 785.649 kb on + strand, within MPMX19_04421 at 785.650 kb on - strand, within MPMX19_04421 at 785.650 kb on - strand, within MPMX19_04421 at 785.650 kb on - strand, within MPMX19_04421 at 785.811 kb on + strand at 785.811 kb on + strand at 785.811 kb on + strand at 785.811 kb on + strand at 785.812 kb on - strand at 785.812 kb on - strand at 785.812 kb on - strand at 785.812 kb on - strand at 785.812 kb on - strand at 785.812 kb on - strand at 785.812 kb on - strand at 785.817 kb on + strand at 785.817 kb on + strand at 785.817 kb on + strand at 785.817 kb on + strand at 785.817 kb on + strand at 785.817 kb on + strand at 785.818 kb on - strand at 785.818 kb on - strand at 785.818 kb on - strand at 785.818 kb on - strand at 785.818 kb on - strand at 785.906 kb on + strand at 785.906 kb on + strand at 785.906 kb on + strand at 785.907 kb on - strand at 785.907 kb on - strand at 785.907 kb on - strand at 785.907 kb on - strand at 786.011 kb on + strand at 786.011 kb on + strand at 786.012 kb on - strand at 786.017 kb on + strand at 786.018 kb on - strand at 786.212 kb on + strand, within MPMX19_04422 at 786.212 kb on + strand, within MPMX19_04422 at 786.212 kb on + strand, within MPMX19_04422 at 786.213 kb on - strand, within MPMX19_04422 at 786.317 kb on + strand, within MPMX19_04422 at 786.317 kb on + strand, within MPMX19_04422 at 786.317 kb on + strand, within MPMX19_04422 at 786.317 kb on + strand, within MPMX19_04422 at 786.318 kb on - strand, within MPMX19_04422 at 786.318 kb on - strand, within MPMX19_04422 at 786.318 kb on - strand, within MPMX19_04422 at 786.318 kb on - strand, within MPMX19_04422 at 786.318 kb on - strand, within MPMX19_04422 at 786.318 kb on - strand, within MPMX19_04422 at 786.344 kb on + strand, within MPMX19_04422 at 786.344 kb on + strand, within MPMX19_04422 at 786.345 kb on - strand, within MPMX19_04422 at 786.434 kb on + strand, within MPMX19_04422 at 786.435 kb on - strand, within MPMX19_04422 at 786.435 kb on - strand, within MPMX19_04422 at 786.435 kb on - strand, within MPMX19_04422 at 786.435 kb on - strand, within MPMX19_04422 at 787.283 kb on + strand, within MPMX19_04422 at 787.283 kb on + strand, within MPMX19_04422 at 787.337 kb on + strand, within MPMX19_04422 at 787.337 kb on + strand, within MPMX19_04422 at 787.338 kb on - strand, within MPMX19_04422 at 787.338 kb on - strand, within MPMX19_04422 at 787.338 kb on - strand, within MPMX19_04422 at 787.338 kb on - strand, within MPMX19_04422 at 787.338 kb on - strand, within MPMX19_04422 at 787.338 kb on - strand, within MPMX19_04422 at 787.338 kb on - strand, within MPMX19_04422 at 787.346 kb on - strand, within MPMX19_04422 at 787.346 kb on - strand, within MPMX19_04422 at 787.346 kb on - strand, within MPMX19_04422 at 787.346 kb on - strand, within MPMX19_04422 at 787.346 kb on - strand, within MPMX19_04422 at 787.443 kb on - strand, within MPMX19_04422 at 787.639 kb on - strand at 787.730 kb on + strand at 787.730 kb on + strand at 787.730 kb on + strand at 787.730 kb on + strand at 787.730 kb on + strand at 787.730 kb on + strand at 787.731 kb on - strand at 787.731 kb on - strand at 787.731 kb on - strand at 787.731 kb on - strand at 787.731 kb on - strand at 787.731 kb on - strand at 787.741 kb on + strand at 787.741 kb on + strand at 787.741 kb on + strand at 787.741 kb on + strand at 787.741 kb on + strand at 787.741 kb on + strand at 787.742 kb on - strand at 787.742 kb on - strand at 787.742 kb on - strand at 787.742 kb on - strand at 787.742 kb on - strand at 787.742 kb on - strand at 787.742 kb on - strand at 787.742 kb on - strand at 787.742 kb on - strand at 787.742 kb on - strand at 787.743 kb on + strand at 787.743 kb on + strand at 787.743 kb on + strand at 787.744 kb on - strand at 787.744 kb on - strand at 787.744 kb on - strand at 787.744 kb on - strand at 787.744 kb on - strand at 787.849 kb on + strand at 787.850 kb on - strand at 787.911 kb on + strand at 787.911 kb on + strand at 787.911 kb on + strand at 787.912 kb on - strand at 787.912 kb on - strand at 788.146 kb on - strand, within MPMX19_04423 at 788.202 kb on + strand, within MPMX19_04423 at 788.202 kb on + strand, within MPMX19_04423 at 788.202 kb on + strand, within MPMX19_04423 at 788.202 kb on + strand, within MPMX19_04423 at 788.202 kb on + strand, within MPMX19_04423 at 788.202 kb on + strand, within MPMX19_04423 at 788.202 kb on + strand, within MPMX19_04423 at 788.202 kb on + strand, within MPMX19_04423 at 788.202 kb on + strand, within MPMX19_04423 at 788.203 kb on - strand, within MPMX19_04423 at 788.203 kb on - strand, within MPMX19_04423 at 788.203 kb on - strand, within MPMX19_04423 at 788.203 kb on - strand, within MPMX19_04423 at 788.203 kb on - strand, within MPMX19_04423 at 788.203 kb on - strand, within MPMX19_04423 at 788.203 kb on - strand, within MPMX19_04423 at 788.203 kb on - strand, within MPMX19_04423 at 788.203 kb on - strand, within MPMX19_04423 at 788.203 kb on - strand, within MPMX19_04423 at 788.203 kb on - strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.298 kb on + strand, within MPMX19_04423 at 788.299 kb on - strand, within MPMX19_04423 at 788.299 kb on - strand, within MPMX19_04423 at 788.299 kb on - strand, within MPMX19_04423 at 788.299 kb on - strand, within MPMX19_04423 at 788.299 kb on - strand, within MPMX19_04423 at 788.299 kb on - strand, within MPMX19_04423 at 788.548 kb on + strand at 788.560 kb on - strand at 788.560 kb on - strand at 788.560 kb on - strand at 788.560 kb on - strand at 788.628 kb on - strand at 788.628 kb on - strand at 788.628 kb on - strand at 788.628 kb on - strand at 788.628 kb on - strand at 788.628 kb on - strand at 788.628 kb on - strand at 788.639 kb on + strand at 788.639 kb on + strand at 788.639 kb on + strand at 788.639 kb on + strand at 788.639 kb on + strand at 788.640 kb on - strand at 788.640 kb on - strand at 788.640 kb on - strand at 788.640 kb on - strand at 788.640 kb on - strand at 788.640 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 785,067 + -0.9 785,067 + -0.4 785,068 - -1.1 785,068 - -0.9 785,314 - MPMX19_04421 0.33 -0.6 785,415 + MPMX19_04421 0.45 +0.3 785,415 + MPMX19_04421 0.45 +0.7 785,415 + MPMX19_04421 0.45 +0.3 785,415 + MPMX19_04421 0.45 -0.3 785,415 + MPMX19_04421 0.45 -0.1 785,415 + MPMX19_04421 0.45 -0.4 785,416 - MPMX19_04421 0.45 -0.6 785,416 - MPMX19_04421 0.45 +0.3 785,416 - MPMX19_04421 0.45 +0.9 785,416 - MPMX19_04421 0.45 -0.3 785,416 - MPMX19_04421 0.45 +0.4 785,416 - MPMX19_04421 0.45 -0.1 785,416 - MPMX19_04421 0.45 -0.5 785,416 - MPMX19_04421 0.45 -0.4 785,416 - MPMX19_04421 0.45 -0.8 785,417 + MPMX19_04421 0.45 +0.5 785,417 + MPMX19_04421 0.45 +1.0 785,418 - MPMX19_04421 0.45 -0.6 785,418 - MPMX19_04421 0.45 +0.4 785,418 - MPMX19_04421 0.45 -0.8 785,418 - MPMX19_04421 0.45 +0.2 785,499 + MPMX19_04421 0.54 -2.8 785,499 + MPMX19_04421 0.54 +0.0 785,499 + MPMX19_04421 0.54 +0.7 785,499 + MPMX19_04421 0.54 -1.9 785,499 + MPMX19_04421 0.54 -0.9 785,499 + MPMX19_04421 0.54 +0.4 785,499 + MPMX19_04421 0.54 -1.9 785,499 + MPMX19_04421 0.54 -0.0 785,499 + MPMX19_04421 0.54 -1.1 785,499 + MPMX19_04421 0.54 -0.9 785,499 + MPMX19_04421 0.54 +0.6 785,499 + MPMX19_04421 0.54 +1.1 785,500 - MPMX19_04421 0.55 +0.6 785,500 - MPMX19_04421 0.55 +0.6 785,500 - MPMX19_04421 0.55 +0.1 785,500 - MPMX19_04421 0.55 +0.3 785,500 - MPMX19_04421 0.55 -1.9 785,500 - MPMX19_04421 0.55 -1.3 785,500 - MPMX19_04421 0.55 -0.3 785,649 + MPMX19_04421 0.72 +0.1 785,649 + MPMX19_04421 0.72 -0.2 785,649 + MPMX19_04421 0.72 +0.6 785,650 - MPMX19_04421 0.72 -0.6 785,650 - MPMX19_04421 0.72 -0.6 785,650 - MPMX19_04421 0.72 -0.3 785,811 + -0.2 785,811 + -1.8 785,811 + +1.8 785,811 + +1.3 785,812 - -1.0 785,812 - +0.1 785,812 - +0.4 785,812 - -0.2 785,812 - +1.3 785,812 - -0.8 785,812 - +0.1 785,817 + +0.4 785,817 + +0.4 785,817 + +0.3 785,817 + +0.6 785,817 + +1.0 785,817 + +1.3 785,818 - +0.2 785,818 - -0.1 785,818 - -0.9 785,818 - +1.0 785,818 - +0.6 785,906 + -0.0 785,906 + -0.3 785,906 + +0.2 785,907 - +0.1 785,907 - +1.2 785,907 - -0.3 785,907 - -0.7 786,011 + -1.0 786,011 + -1.4 786,012 - -2.1 786,017 + -1.0 786,018 - -0.2 786,212 + MPMX19_04422 0.17 -1.3 786,212 + MPMX19_04422 0.17 -1.7 786,212 + MPMX19_04422 0.17 -0.6 786,213 - MPMX19_04422 0.17 -2.1 786,317 + MPMX19_04422 0.23 -1.2 786,317 + MPMX19_04422 0.23 +0.1 786,317 + MPMX19_04422 0.23 +0.6 786,317 + MPMX19_04422 0.23 -1.0 786,318 - MPMX19_04422 0.23 -1.4 786,318 - MPMX19_04422 0.23 -0.4 786,318 - MPMX19_04422 0.23 -1.4 786,318 - MPMX19_04422 0.23 +0.8 786,318 - MPMX19_04422 0.23 -1.0 786,318 - MPMX19_04422 0.23 -1.9 786,344 + MPMX19_04422 0.25 +0.2 786,344 + MPMX19_04422 0.25 -1.0 786,345 - MPMX19_04422 0.25 -1.0 786,434 + MPMX19_04422 0.30 -1.0 786,435 - MPMX19_04422 0.30 -1.0 786,435 - MPMX19_04422 0.30 -1.2 786,435 - MPMX19_04422 0.30 -0.4 786,435 - MPMX19_04422 0.30 -1.2 787,283 + MPMX19_04422 0.78 -2.4 787,283 + MPMX19_04422 0.78 -1.0 787,337 + MPMX19_04422 0.81 -1.0 787,337 + MPMX19_04422 0.81 -1.2 787,338 - MPMX19_04422 0.81 -0.6 787,338 - MPMX19_04422 0.81 +0.2 787,338 - MPMX19_04422 0.81 +0.1 787,338 - MPMX19_04422 0.81 -0.6 787,338 - MPMX19_04422 0.81 -0.9 787,338 - MPMX19_04422 0.81 -1.0 787,338 - MPMX19_04422 0.81 -0.8 787,346 - MPMX19_04422 0.82 -1.2 787,346 - MPMX19_04422 0.82 -0.6 787,346 - MPMX19_04422 0.82 -0.5 787,346 - MPMX19_04422 0.82 -1.4 787,346 - MPMX19_04422 0.82 +0.6 787,443 - MPMX19_04422 0.87 -1.5 787,639 - -0.4 787,730 + +1.6 787,730 + +0.1 787,730 + -1.7 787,730 + -0.2 787,730 + -0.7 787,730 + -1.4 787,731 - -1.4 787,731 - +0.2 787,731 - -0.7 787,731 - -0.2 787,731 - -0.4 787,731 - -0.7 787,741 + -0.2 787,741 + +3.1 787,741 + -0.7 787,741 + +0.4 787,741 + +1.6 787,741 + -0.4 787,742 - +0.6 787,742 - -2.0 787,742 - +0.6 787,742 - +0.3 787,742 - -1.0 787,742 - -1.0 787,742 - -0.8 787,742 - +0.8 787,742 - -1.0 787,742 - +0.3 787,743 + +1.1 787,743 + +0.6 787,743 + +0.6 787,744 - +0.3 787,744 - -1.3 787,744 - +0.7 787,744 - +0.1 787,744 - +0.6 787,849 + +0.8 787,850 - -0.1 787,911 + +0.8 787,911 + -1.2 787,911 + +0.4 787,912 - -0.4 787,912 - +0.2 788,146 - MPMX19_04423 0.50 +0.7 788,202 + MPMX19_04423 0.61 -0.5 788,202 + MPMX19_04423 0.61 -0.0 788,202 + MPMX19_04423 0.61 -0.6 788,202 + MPMX19_04423 0.61 +1.0 788,202 + MPMX19_04423 0.61 -0.5 788,202 + MPMX19_04423 0.61 -0.6 788,202 + MPMX19_04423 0.61 -0.6 788,202 + MPMX19_04423 0.61 -0.7 788,202 + MPMX19_04423 0.61 +2.0 788,203 - MPMX19_04423 0.61 -0.9 788,203 - MPMX19_04423 0.61 -0.6 788,203 - MPMX19_04423 0.61 -0.3 788,203 - MPMX19_04423 0.61 -0.6 788,203 - MPMX19_04423 0.61 -0.6 788,203 - MPMX19_04423 0.61 +0.3 788,203 - MPMX19_04423 0.61 -2.1 788,203 - MPMX19_04423 0.61 -0.1 788,203 - MPMX19_04423 0.61 +0.7 788,203 - MPMX19_04423 0.61 +0.6 788,203 - MPMX19_04423 0.61 +0.2 788,298 + MPMX19_04423 0.80 +0.6 788,298 + MPMX19_04423 0.80 -1.9 788,298 + MPMX19_04423 0.80 +0.2 788,298 + MPMX19_04423 0.80 -2.0 788,298 + MPMX19_04423 0.80 +0.3 788,298 + MPMX19_04423 0.80 -0.9 788,298 + MPMX19_04423 0.80 +0.8 788,298 + MPMX19_04423 0.80 +0.0 788,298 + MPMX19_04423 0.80 +0.4 788,298 + MPMX19_04423 0.80 -0.4 788,298 + MPMX19_04423 0.80 +1.0 788,298 + MPMX19_04423 0.80 -1.2 788,298 + MPMX19_04423 0.80 +0.6 788,299 - MPMX19_04423 0.80 -0.8 788,299 - MPMX19_04423 0.80 +1.0 788,299 - MPMX19_04423 0.80 -0.9 788,299 - MPMX19_04423 0.80 -0.8 788,299 - MPMX19_04423 0.80 -1.4 788,299 - MPMX19_04423 0.80 +1.0 788,548 + +0.2 788,560 - -0.8 788,560 - -1.9 788,560 - -0.4 788,560 - +0.3 788,628 - +0.6 788,628 - -0.4 788,628 - -0.8 788,628 - +0.4 788,628 - -0.6 788,628 - -0.2 788,628 - -1.0 788,639 + -0.2 788,639 + -0.9 788,639 + -0.6 788,639 + -0.1 788,639 + +0.4 788,640 - -1.0 788,640 - -1.0 788,640 - -0.5 788,640 - -0.0 788,640 - -1.1 788,640 - -1.4
Or see this region's nucleotide sequence