Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03634 and MPMX19_03635 are separated by 133 nucleotides MPMX19_03635 and MPMX19_03636 are separated by 138 nucleotides
MPMX19_03634: MPMX19_03634 - Arginase, at 1,070,160 to 1,071,110
_03634
MPMX19_03635: MPMX19_03635 - DNA-binding transcriptional activator DecR, at 1,071,244 to 1,071,693
_03635
MPMX19_03636: MPMX19_03636 - Octopine permease ATP-binding protein P, at 1,071,832 to 1,072,689
_03636
Position (kb)
1071
1072 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1070.614 kb on + strand, within MPMX19_03634 at 1070.614 kb on + strand, within MPMX19_03634 at 1070.615 kb on - strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.845 kb on + strand, within MPMX19_03634 at 1070.846 kb on - strand, within MPMX19_03634 at 1070.846 kb on - strand, within MPMX19_03634 at 1071.104 kb on - strand at 1071.404 kb on - strand, within MPMX19_03635 at 1071.404 kb on - strand, within MPMX19_03635 at 1071.691 kb on + strand at 1071.691 kb on + strand at 1071.691 kb on + strand at 1071.691 kb on + strand at 1071.691 kb on + strand at 1071.691 kb on + strand at 1071.691 kb on + strand at 1071.691 kb on + strand at 1071.691 kb on + strand at 1071.691 kb on + strand at 1071.691 kb on + strand at 1071.691 kb on + strand at 1071.692 kb on - strand at 1071.692 kb on - strand at 1071.692 kb on - strand at 1071.692 kb on - strand at 1071.968 kb on + strand, within MPMX19_03636 at 1071.968 kb on + strand, within MPMX19_03636 at 1071.968 kb on + strand, within MPMX19_03636 at 1071.968 kb on + strand, within MPMX19_03636 at 1072.050 kb on + strand, within MPMX19_03636 at 1072.050 kb on + strand, within MPMX19_03636 at 1072.051 kb on - strand, within MPMX19_03636 at 1072.051 kb on - strand, within MPMX19_03636 at 1072.051 kb on - strand, within MPMX19_03636 at 1072.051 kb on - strand, within MPMX19_03636 at 1072.051 kb on - strand, within MPMX19_03636 at 1072.051 kb on - strand, within MPMX19_03636 at 1072.051 kb on - strand, within MPMX19_03636 at 1072.051 kb on - strand, within MPMX19_03636 at 1072.691 kb on + strand at 1072.692 kb on - strand at 1072.692 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 1,070,614 + MPMX19_03634 0.48 +2.9 1,070,614 + MPMX19_03634 0.48 -0.4 1,070,615 - MPMX19_03634 0.48 +1.6 1,070,644 + MPMX19_03634 0.51 -0.6 1,070,644 + MPMX19_03634 0.51 -0.7 1,070,644 + MPMX19_03634 0.51 +0.6 1,070,644 + MPMX19_03634 0.51 +0.6 1,070,644 + MPMX19_03634 0.51 -0.3 1,070,645 - MPMX19_03634 0.51 -0.6 1,070,645 - MPMX19_03634 0.51 -2.0 1,070,645 - MPMX19_03634 0.51 +0.3 1,070,645 - MPMX19_03634 0.51 +0.4 1,070,645 - MPMX19_03634 0.51 +0.6 1,070,645 - MPMX19_03634 0.51 -1.0 1,070,645 - MPMX19_03634 0.51 -0.4 1,070,845 + MPMX19_03634 0.72 +1.6 1,070,846 - MPMX19_03634 0.72 +0.1 1,070,846 - MPMX19_03634 0.72 -1.1 1,071,104 - +0.9 1,071,404 - MPMX19_03635 0.36 -1.6 1,071,404 - MPMX19_03635 0.36 -2.3 1,071,691 + -1.1 1,071,691 + -0.1 1,071,691 + -0.1 1,071,691 + -1.1 1,071,691 + -1.5 1,071,691 + +1.0 1,071,691 + -0.2 1,071,691 + -0.4 1,071,691 + +0.3 1,071,691 + -0.4 1,071,691 + +0.2 1,071,691 + -1.9 1,071,692 - -0.3 1,071,692 - -0.6 1,071,692 - -0.4 1,071,692 - -0.1 1,071,968 + MPMX19_03636 0.16 -0.1 1,071,968 + MPMX19_03636 0.16 +0.2 1,071,968 + MPMX19_03636 0.16 -1.2 1,071,968 + MPMX19_03636 0.16 -0.6 1,072,050 + MPMX19_03636 0.25 +0.6 1,072,050 + MPMX19_03636 0.25 -1.9 1,072,051 - MPMX19_03636 0.26 +0.2 1,072,051 - MPMX19_03636 0.26 -1.6 1,072,051 - MPMX19_03636 0.26 +0.1 1,072,051 - MPMX19_03636 0.26 -1.2 1,072,051 - MPMX19_03636 0.26 -0.2 1,072,051 - MPMX19_03636 0.26 -0.2 1,072,051 - MPMX19_03636 0.26 -0.9 1,072,051 - MPMX19_03636 0.26 -0.1 1,072,691 + -0.3 1,072,692 - -0.5 1,072,692 - -0.1
Or see this region's nucleotide sequence