Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03364 and MPMX19_03365 are separated by 7 nucleotides MPMX19_03365 and MPMX19_03366 are separated by 8 nucleotides MPMX19_03366 and MPMX19_03367 are separated by 34 nucleotides MPMX19_03367 and MPMX19_03368 are separated by 390 nucleotides
MPMX19_03364: MPMX19_03364 - Vitamin B12 import ATP-binding protein BtuD, at 738,347 to 740,098
_03364
MPMX19_03365: MPMX19_03365 - hypothetical protein, at 740,106 to 740,864
_03365
MPMX19_03366: MPMX19_03366 - hypothetical protein, at 740,873 to 741,043
_03366
MPMX19_03367: MPMX19_03367 - Magnetosome membrane protein 22, at 741,078 to 741,581
_03367
MPMX19_03368: MPMX19_03368 - hypothetical protein, at 741,972 to 745,289
_03368
Position (kb) 741
742 Strain fitness (log2 ratio) -2
-1
0
1
2 at 740.221 kb on + strand, within MPMX19_03365 at 740.221 kb on + strand, within MPMX19_03365 at 740.222 kb on - strand, within MPMX19_03365 at 740.222 kb on - strand, within MPMX19_03365 at 740.222 kb on - strand, within MPMX19_03365 at 740.293 kb on + strand, within MPMX19_03365 at 740.293 kb on + strand, within MPMX19_03365 at 740.293 kb on + strand, within MPMX19_03365 at 740.293 kb on + strand, within MPMX19_03365 at 740.293 kb on + strand, within MPMX19_03365 at 740.293 kb on + strand, within MPMX19_03365 at 740.294 kb on - strand, within MPMX19_03365 at 740.294 kb on - strand, within MPMX19_03365 at 740.294 kb on - strand, within MPMX19_03365 at 740.294 kb on - strand, within MPMX19_03365 at 740.294 kb on - strand, within MPMX19_03365 at 740.294 kb on - strand, within MPMX19_03365 at 740.294 kb on - strand, within MPMX19_03365 at 740.294 kb on - strand, within MPMX19_03365 at 740.294 kb on - strand, within MPMX19_03365 at 740.392 kb on + strand, within MPMX19_03365 at 740.392 kb on + strand, within MPMX19_03365 at 740.392 kb on + strand, within MPMX19_03365 at 740.393 kb on - strand, within MPMX19_03365 at 740.393 kb on - strand, within MPMX19_03365 at 740.393 kb on - strand, within MPMX19_03365 at 740.393 kb on - strand, within MPMX19_03365 at 740.419 kb on + strand, within MPMX19_03365 at 740.419 kb on + strand, within MPMX19_03365 at 740.420 kb on - strand, within MPMX19_03365 at 740.420 kb on - strand, within MPMX19_03365 at 740.450 kb on - strand, within MPMX19_03365 at 740.545 kb on + strand, within MPMX19_03365 at 740.545 kb on + strand, within MPMX19_03365 at 740.545 kb on + strand, within MPMX19_03365 at 740.545 kb on + strand, within MPMX19_03365 at 740.545 kb on + strand, within MPMX19_03365 at 740.546 kb on - strand, within MPMX19_03365 at 740.546 kb on - strand, within MPMX19_03365 at 740.546 kb on - strand, within MPMX19_03365 at 740.546 kb on - strand, within MPMX19_03365 at 740.725 kb on + strand, within MPMX19_03365 at 740.725 kb on + strand, within MPMX19_03365 at 740.725 kb on + strand, within MPMX19_03365 at 740.725 kb on + strand, within MPMX19_03365 at 740.725 kb on + strand, within MPMX19_03365 at 740.725 kb on + strand, within MPMX19_03365 at 740.725 kb on + strand, within MPMX19_03365 at 740.725 kb on + strand, within MPMX19_03365 at 740.725 kb on + strand, within MPMX19_03365 at 740.725 kb on + strand, within MPMX19_03365 at 740.726 kb on - strand, within MPMX19_03365 at 740.726 kb on - strand, within MPMX19_03365 at 740.726 kb on - strand, within MPMX19_03365 at 740.731 kb on + strand, within MPMX19_03365 at 740.731 kb on + strand, within MPMX19_03365 at 740.732 kb on - strand, within MPMX19_03365 at 740.732 kb on - strand, within MPMX19_03365 at 740.767 kb on + strand, within MPMX19_03365 at 740.964 kb on + strand, within MPMX19_03366 at 740.964 kb on + strand, within MPMX19_03366 at 740.964 kb on + strand, within MPMX19_03366 at 740.964 kb on + strand, within MPMX19_03366 at 740.965 kb on - strand, within MPMX19_03366 at 740.965 kb on - strand, within MPMX19_03366 at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.178 kb on + strand, within MPMX19_03367 at 741.179 kb on - strand, within MPMX19_03367 at 741.433 kb on + strand, within MPMX19_03367 at 741.433 kb on + strand, within MPMX19_03367 at 741.433 kb on + strand, within MPMX19_03367 at 741.434 kb on - strand, within MPMX19_03367 at 741.434 kb on - strand, within MPMX19_03367 at 741.434 kb on - strand, within MPMX19_03367 at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.533 kb on - strand at 741.533 kb on - strand at 741.533 kb on - strand at 741.533 kb on - strand at 741.533 kb on - strand at 741.533 kb on - strand at 741.541 kb on + strand at 741.541 kb on + strand at 741.541 kb on + strand at 741.541 kb on + strand at 741.541 kb on + strand at 741.542 kb on - strand at 741.542 kb on - strand at 741.542 kb on - strand at 741.570 kb on - strand at 741.577 kb on - strand at 741.577 kb on - strand at 741.577 kb on - strand at 741.577 kb on - strand at 741.577 kb on - strand at 741.577 kb on - strand at 741.763 kb on - strand at 741.773 kb on - strand at 741.773 kb on - strand at 741.783 kb on - strand at 741.790 kb on - strand at 741.805 kb on + strand at 741.805 kb on + strand at 741.822 kb on - strand at 741.822 kb on - strand at 741.887 kb on + strand at 741.924 kb on + strand at 741.944 kb on + strand at 741.973 kb on + strand at 741.973 kb on + strand at 741.974 kb on - strand at 742.068 kb on - strand at 742.068 kb on - strand at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.418 kb on - strand, within MPMX19_03368 at 742.418 kb on - strand, within MPMX19_03368 at 742.418 kb on - strand, within MPMX19_03368 at 742.418 kb on - strand, within MPMX19_03368 at 742.418 kb on - strand, within MPMX19_03368 at 742.500 kb on - strand, within MPMX19_03368 at 742.500 kb on - strand, within MPMX19_03368 at 742.558 kb on + strand, within MPMX19_03368 at 742.558 kb on + strand, within MPMX19_03368 at 742.559 kb on - strand, within MPMX19_03368 at 742.559 kb on - strand, within MPMX19_03368
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 740,221 + MPMX19_03365 0.15 -0.1 740,221 + MPMX19_03365 0.15 +0.4 740,222 - MPMX19_03365 0.15 -1.1 740,222 - MPMX19_03365 0.15 +1.6 740,222 - MPMX19_03365 0.15 -1.1 740,293 + MPMX19_03365 0.25 +1.0 740,293 + MPMX19_03365 0.25 -1.4 740,293 + MPMX19_03365 0.25 +0.3 740,293 + MPMX19_03365 0.25 +0.0 740,293 + MPMX19_03365 0.25 -0.6 740,293 + MPMX19_03365 0.25 -1.6 740,294 - MPMX19_03365 0.25 +1.0 740,294 - MPMX19_03365 0.25 -0.2 740,294 - MPMX19_03365 0.25 -0.4 740,294 - MPMX19_03365 0.25 +0.6 740,294 - MPMX19_03365 0.25 -0.3 740,294 - MPMX19_03365 0.25 -0.1 740,294 - MPMX19_03365 0.25 -0.8 740,294 - MPMX19_03365 0.25 +0.5 740,294 - MPMX19_03365 0.25 -0.1 740,392 + MPMX19_03365 0.38 -0.4 740,392 + MPMX19_03365 0.38 -1.7 740,392 + MPMX19_03365 0.38 -1.0 740,393 - MPMX19_03365 0.38 +0.7 740,393 - MPMX19_03365 0.38 -1.2 740,393 - MPMX19_03365 0.38 -1.2 740,393 - MPMX19_03365 0.38 +0.3 740,419 + MPMX19_03365 0.41 -0.0 740,419 + MPMX19_03365 0.41 +0.6 740,420 - MPMX19_03365 0.41 -1.1 740,420 - MPMX19_03365 0.41 -0.8 740,450 - MPMX19_03365 0.45 -0.3 740,545 + MPMX19_03365 0.58 +1.6 740,545 + MPMX19_03365 0.58 +0.9 740,545 + MPMX19_03365 0.58 +0.8 740,545 + MPMX19_03365 0.58 +0.0 740,545 + MPMX19_03365 0.58 -0.6 740,546 - MPMX19_03365 0.58 -2.7 740,546 - MPMX19_03365 0.58 -0.0 740,546 - MPMX19_03365 0.58 -0.8 740,546 - MPMX19_03365 0.58 +1.2 740,725 + MPMX19_03365 0.82 +0.4 740,725 + MPMX19_03365 0.82 -0.1 740,725 + MPMX19_03365 0.82 -0.6 740,725 + MPMX19_03365 0.82 -0.4 740,725 + MPMX19_03365 0.82 -0.7 740,725 + MPMX19_03365 0.82 -1.2 740,725 + MPMX19_03365 0.82 -0.4 740,725 + MPMX19_03365 0.82 +0.7 740,725 + MPMX19_03365 0.82 -1.1 740,725 + MPMX19_03365 0.82 -0.6 740,726 - MPMX19_03365 0.82 -1.0 740,726 - MPMX19_03365 0.82 -0.6 740,726 - MPMX19_03365 0.82 -0.7 740,731 + MPMX19_03365 0.82 -0.9 740,731 + MPMX19_03365 0.82 -1.8 740,732 - MPMX19_03365 0.82 -2.2 740,732 - MPMX19_03365 0.82 -0.0 740,767 + MPMX19_03365 0.87 -0.7 740,964 + MPMX19_03366 0.53 -0.3 740,964 + MPMX19_03366 0.53 -0.5 740,964 + MPMX19_03366 0.53 -0.7 740,964 + MPMX19_03366 0.53 -0.4 740,965 - MPMX19_03366 0.54 -0.2 740,965 - MPMX19_03366 0.54 +0.3 741,027 + +1.1 741,027 + -0.5 741,027 + +0.8 741,027 + -0.5 741,027 + -0.8 741,027 + -1.0 741,027 + -0.8 741,027 + -0.2 741,027 + -0.0 741,027 + -1.6 741,027 + -0.2 741,027 + -2.5 741,028 - -0.3 741,028 - -0.8 741,028 - +0.3 741,028 - +0.2 741,028 - -0.2 741,028 - +0.9 741,028 - +0.5 741,028 - +0.3 741,028 - -0.8 741,028 - -0.7 741,028 - -0.6 741,178 + MPMX19_03367 0.20 -1.7 741,179 - MPMX19_03367 0.20 -1.7 741,433 + MPMX19_03367 0.70 -1.4 741,433 + MPMX19_03367 0.70 -0.6 741,433 + MPMX19_03367 0.70 -1.1 741,434 - MPMX19_03367 0.71 -1.1 741,434 - MPMX19_03367 0.71 -1.6 741,434 - MPMX19_03367 0.71 -0.1 741,532 + -1.8 741,532 + -1.0 741,532 + -1.4 741,532 + +0.6 741,532 + -1.2 741,532 + -0.2 741,532 + -0.1 741,532 + +0.6 741,532 + +0.2 741,533 - -1.2 741,533 - -1.6 741,533 - -1.5 741,533 - +0.3 741,533 - +0.2 741,533 - -1.2 741,541 + -1.4 741,541 + +0.3 741,541 + +2.2 741,541 + -2.1 741,541 + +0.3 741,542 - -0.3 741,542 - -0.8 741,542 - -0.7 741,570 - -1.0 741,577 - +0.0 741,577 - -0.2 741,577 - -0.6 741,577 - -1.7 741,577 - -0.2 741,577 - +0.4 741,763 - -0.6 741,773 - -1.6 741,773 - +0.8 741,783 - +0.6 741,790 - -0.9 741,805 + -1.9 741,805 + +0.6 741,822 - -0.3 741,822 - +0.6 741,887 + +0.7 741,924 + -0.8 741,944 + -0.8 741,973 + -0.9 741,973 + -0.7 741,974 - +0.6 742,068 - -1.2 742,068 - -0.4 742,417 + MPMX19_03368 0.13 -0.4 742,417 + MPMX19_03368 0.13 -1.2 742,417 + MPMX19_03368 0.13 +0.8 742,417 + MPMX19_03368 0.13 -1.7 742,417 + MPMX19_03368 0.13 -2.4 742,417 + MPMX19_03368 0.13 -1.4 742,417 + MPMX19_03368 0.13 -0.4 742,418 - MPMX19_03368 0.13 +0.6 742,418 - MPMX19_03368 0.13 +1.2 742,418 - MPMX19_03368 0.13 -0.5 742,418 - MPMX19_03368 0.13 +1.0 742,418 - MPMX19_03368 0.13 -0.1 742,500 - MPMX19_03368 0.16 +0.6 742,500 - MPMX19_03368 0.16 -1.9 742,558 + MPMX19_03368 0.18 -1.7 742,558 + MPMX19_03368 0.18 +0.4 742,559 - MPMX19_03368 0.18 +0.3 742,559 - MPMX19_03368 0.18 +0.0
Or see this region's nucleotide sequence