Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02709 and OHPLBJKB_02710 are separated by 75 nucleotides OHPLBJKB_02710 and OHPLBJKB_02711 are separated by 185 nucleotides OHPLBJKB_02711 and OHPLBJKB_02712 overlap by 40 nucleotides OHPLBJKB_02712 and OHPLBJKB_02713 are separated by 69 nucleotides
OHPLBJKB_02709: OHPLBJKB_02709 - Outer membrane protein A, at 2,820,972 to 2,822,012
_02709
OHPLBJKB_02710: OHPLBJKB_02710 - Macrodomain Ter protein, at 2,822,088 to 2,822,540
_02710
OHPLBJKB_02711: OHPLBJKB_02711 - Lon protease, at 2,822,726 to 2,824,486
_02711
OHPLBJKB_02712: OHPLBJKB_02712 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, at 2,824,447 to 2,825,073
_02712
OHPLBJKB_02713: OHPLBJKB_02713 - Ribosome modulation factor, at 2,825,143 to 2,825,310
_02713
Position (kb)
2822
2823
2824
2825 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2821.776 kb on + strand, within OHPLBJKB_02709 at 2822.010 kb on + strand at 2822.010 kb on + strand at 2822.010 kb on + strand at 2822.010 kb on + strand at 2822.062 kb on + strand at 2822.062 kb on + strand at 2822.089 kb on + strand at 2822.089 kb on + strand at 2822.090 kb on - strand at 2822.139 kb on - strand, within OHPLBJKB_02710 at 2822.246 kb on + strand, within OHPLBJKB_02710 at 2822.357 kb on + strand, within OHPLBJKB_02710 at 2822.358 kb on - strand, within OHPLBJKB_02710 at 2822.379 kb on + strand, within OHPLBJKB_02710 at 2822.445 kb on + strand, within OHPLBJKB_02710 at 2822.445 kb on + strand, within OHPLBJKB_02710 at 2822.446 kb on - strand, within OHPLBJKB_02710 at 2822.446 kb on - strand, within OHPLBJKB_02710 at 2822.446 kb on - strand, within OHPLBJKB_02710 at 2822.446 kb on - strand, within OHPLBJKB_02710 at 2822.446 kb on - strand, within OHPLBJKB_02710 at 2822.460 kb on + strand, within OHPLBJKB_02710 at 2822.461 kb on - strand, within OHPLBJKB_02710 at 2822.491 kb on + strand, within OHPLBJKB_02710 at 2822.491 kb on + strand, within OHPLBJKB_02710 at 2822.492 kb on - strand, within OHPLBJKB_02710 at 2822.533 kb on + strand at 2822.644 kb on + strand at 2822.644 kb on + strand at 2822.788 kb on - strand at 2822.899 kb on + strand at 2822.900 kb on - strand at 2822.900 kb on - strand at 2822.965 kb on - strand, within OHPLBJKB_02711 at 2823.028 kb on - strand, within OHPLBJKB_02711 at 2823.028 kb on - strand, within OHPLBJKB_02711 at 2823.131 kb on - strand, within OHPLBJKB_02711 at 2823.142 kb on + strand, within OHPLBJKB_02711 at 2823.143 kb on - strand, within OHPLBJKB_02711 at 2823.202 kb on + strand, within OHPLBJKB_02711 at 2823.202 kb on + strand, within OHPLBJKB_02711 at 2823.245 kb on - strand, within OHPLBJKB_02711 at 2823.410 kb on + strand, within OHPLBJKB_02711 at 2823.411 kb on - strand, within OHPLBJKB_02711 at 2823.457 kb on - strand, within OHPLBJKB_02711 at 2823.485 kb on - strand, within OHPLBJKB_02711 at 2823.496 kb on + strand, within OHPLBJKB_02711 at 2823.496 kb on + strand, within OHPLBJKB_02711 at 2823.497 kb on - strand, within OHPLBJKB_02711 at 2823.497 kb on - strand, within OHPLBJKB_02711 at 2823.504 kb on + strand, within OHPLBJKB_02711 at 2823.557 kb on + strand, within OHPLBJKB_02711 at 2823.614 kb on - strand, within OHPLBJKB_02711 at 2823.664 kb on - strand, within OHPLBJKB_02711 at 2823.670 kb on - strand, within OHPLBJKB_02711 at 2823.670 kb on - strand, within OHPLBJKB_02711 at 2823.716 kb on - strand, within OHPLBJKB_02711 at 2823.716 kb on - strand, within OHPLBJKB_02711 at 2823.844 kb on + strand, within OHPLBJKB_02711 at 2823.963 kb on + strand, within OHPLBJKB_02711 at 2824.016 kb on + strand, within OHPLBJKB_02711 at 2824.016 kb on + strand, within OHPLBJKB_02711 at 2824.036 kb on + strand, within OHPLBJKB_02711 at 2824.037 kb on - strand, within OHPLBJKB_02711 at 2824.108 kb on + strand, within OHPLBJKB_02711 at 2824.158 kb on + strand, within OHPLBJKB_02711 at 2824.158 kb on + strand, within OHPLBJKB_02711 at 2824.158 kb on + strand, within OHPLBJKB_02711 at 2824.159 kb on - strand, within OHPLBJKB_02711 at 2824.254 kb on + strand, within OHPLBJKB_02711 at 2824.254 kb on + strand, within OHPLBJKB_02711 at 2824.254 kb on + strand, within OHPLBJKB_02711 at 2824.255 kb on - strand, within OHPLBJKB_02711 at 2824.342 kb on - strand at 2824.347 kb on + strand at 2824.348 kb on - strand at 2824.455 kb on + strand at 2824.456 kb on - strand at 2825.075 kb on + strand at 2825.153 kb on - strand at 2825.153 kb on - strand at 2825.153 kb on - strand at 2825.326 kb on + strand at 2825.380 kb on - strand at 2825.436 kb on - strand at 2825.466 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,821,776 + OHPLBJKB_02709 0.77 -1.5 2,822,010 + -1.1 2,822,010 + -1.9 2,822,010 + -0.6 2,822,010 + -2.8 2,822,062 + +0.3 2,822,062 + +0.4 2,822,089 + +1.3 2,822,089 + +0.8 2,822,090 - +0.5 2,822,139 - OHPLBJKB_02710 0.11 -0.8 2,822,246 + OHPLBJKB_02710 0.35 +1.6 2,822,357 + OHPLBJKB_02710 0.59 +1.3 2,822,358 - OHPLBJKB_02710 0.60 -0.4 2,822,379 + OHPLBJKB_02710 0.64 +2.9 2,822,445 + OHPLBJKB_02710 0.79 +2.6 2,822,445 + OHPLBJKB_02710 0.79 +2.0 2,822,446 - OHPLBJKB_02710 0.79 -1.2 2,822,446 - OHPLBJKB_02710 0.79 +1.3 2,822,446 - OHPLBJKB_02710 0.79 +1.2 2,822,446 - OHPLBJKB_02710 0.79 -0.0 2,822,446 - OHPLBJKB_02710 0.79 -1.9 2,822,460 + OHPLBJKB_02710 0.82 +0.5 2,822,461 - OHPLBJKB_02710 0.82 +0.9 2,822,491 + OHPLBJKB_02710 0.89 +0.7 2,822,491 + OHPLBJKB_02710 0.89 +0.3 2,822,492 - OHPLBJKB_02710 0.89 +0.1 2,822,533 + +0.9 2,822,644 + -1.7 2,822,644 + -0.9 2,822,788 - +0.8 2,822,899 + +0.5 2,822,900 - -1.5 2,822,900 - -0.3 2,822,965 - OHPLBJKB_02711 0.14 +0.6 2,823,028 - OHPLBJKB_02711 0.17 -0.1 2,823,028 - OHPLBJKB_02711 0.17 +0.4 2,823,131 - OHPLBJKB_02711 0.23 +1.0 2,823,142 + OHPLBJKB_02711 0.24 +1.3 2,823,143 - OHPLBJKB_02711 0.24 +1.0 2,823,202 + OHPLBJKB_02711 0.27 -0.4 2,823,202 + OHPLBJKB_02711 0.27 +0.9 2,823,245 - OHPLBJKB_02711 0.29 +2.1 2,823,410 + OHPLBJKB_02711 0.39 -2.5 2,823,411 - OHPLBJKB_02711 0.39 -1.4 2,823,457 - OHPLBJKB_02711 0.42 -0.3 2,823,485 - OHPLBJKB_02711 0.43 +1.5 2,823,496 + OHPLBJKB_02711 0.44 +0.3 2,823,496 + OHPLBJKB_02711 0.44 +0.5 2,823,497 - OHPLBJKB_02711 0.44 +0.5 2,823,497 - OHPLBJKB_02711 0.44 -0.1 2,823,504 + OHPLBJKB_02711 0.44 -0.4 2,823,557 + OHPLBJKB_02711 0.47 -0.3 2,823,614 - OHPLBJKB_02711 0.50 +1.1 2,823,664 - OHPLBJKB_02711 0.53 -1.2 2,823,670 - OHPLBJKB_02711 0.54 -0.4 2,823,670 - OHPLBJKB_02711 0.54 -0.4 2,823,716 - OHPLBJKB_02711 0.56 +3.0 2,823,716 - OHPLBJKB_02711 0.56 +0.5 2,823,844 + OHPLBJKB_02711 0.63 +0.2 2,823,963 + OHPLBJKB_02711 0.70 -1.0 2,824,016 + OHPLBJKB_02711 0.73 +0.4 2,824,016 + OHPLBJKB_02711 0.73 +0.3 2,824,036 + OHPLBJKB_02711 0.74 +0.1 2,824,037 - OHPLBJKB_02711 0.74 +0.3 2,824,108 + OHPLBJKB_02711 0.78 +1.1 2,824,158 + OHPLBJKB_02711 0.81 -0.2 2,824,158 + OHPLBJKB_02711 0.81 +0.5 2,824,158 + OHPLBJKB_02711 0.81 -0.1 2,824,159 - OHPLBJKB_02711 0.81 -0.6 2,824,254 + OHPLBJKB_02711 0.87 +0.2 2,824,254 + OHPLBJKB_02711 0.87 -1.3 2,824,254 + OHPLBJKB_02711 0.87 +1.3 2,824,255 - OHPLBJKB_02711 0.87 +2.0 2,824,342 - -1.0 2,824,347 + -0.3 2,824,348 - -0.9 2,824,455 + -1.9 2,824,456 - +1.5 2,825,075 + -1.0 2,825,153 - +0.5 2,825,153 - +0.4 2,825,153 - -1.6 2,825,326 + +0.1 2,825,380 - -1.0 2,825,436 - -1.0 2,825,466 - +0.5
Or see this region's nucleotide sequence