Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02108 and OHPLBJKB_02109 are separated by 390 nucleotides OHPLBJKB_02109 and OHPLBJKB_02110 overlap by 4 nucleotides
OHPLBJKB_02108: OHPLBJKB_02108 - hypothetical protein, at 2,183,651 to 2,184,229
_02108
OHPLBJKB_02109: OHPLBJKB_02109 - Beta-glucuronidase, at 2,184,620 to 2,186,431
_02109
OHPLBJKB_02110: OHPLBJKB_02110 - Glucuronide carrier protein, at 2,186,428 to 2,187,801
_02110
Position (kb)
2184
2185
2186
2187 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2183.627 kb on + strand at 2183.627 kb on + strand at 2183.627 kb on + strand at 2183.627 kb on + strand at 2183.628 kb on - strand at 2183.628 kb on - strand at 2183.628 kb on - strand at 2183.628 kb on - strand at 2183.628 kb on - strand at 2183.784 kb on - strand, within OHPLBJKB_02108 at 2183.784 kb on - strand, within OHPLBJKB_02108 at 2183.825 kb on - strand, within OHPLBJKB_02108 at 2183.825 kb on - strand, within OHPLBJKB_02108 at 2183.894 kb on + strand, within OHPLBJKB_02108 at 2183.894 kb on + strand, within OHPLBJKB_02108 at 2183.894 kb on + strand, within OHPLBJKB_02108 at 2183.894 kb on + strand, within OHPLBJKB_02108 at 2183.894 kb on + strand, within OHPLBJKB_02108 at 2183.894 kb on + strand, within OHPLBJKB_02108 at 2183.895 kb on - strand, within OHPLBJKB_02108 at 2183.895 kb on - strand, within OHPLBJKB_02108 at 2183.895 kb on - strand, within OHPLBJKB_02108 at 2183.895 kb on - strand, within OHPLBJKB_02108 at 2183.896 kb on + strand, within OHPLBJKB_02108 at 2183.897 kb on - strand, within OHPLBJKB_02108 at 2183.897 kb on - strand, within OHPLBJKB_02108 at 2183.897 kb on - strand, within OHPLBJKB_02108 at 2184.011 kb on - strand, within OHPLBJKB_02108 at 2184.017 kb on - strand, within OHPLBJKB_02108 at 2184.017 kb on - strand, within OHPLBJKB_02108 at 2184.017 kb on - strand, within OHPLBJKB_02108 at 2184.216 kb on + strand at 2184.259 kb on - strand at 2184.259 kb on - strand at 2184.282 kb on + strand at 2184.283 kb on - strand at 2184.283 kb on - strand at 2184.351 kb on + strand at 2184.351 kb on + strand at 2184.351 kb on + strand at 2184.351 kb on + strand at 2184.351 kb on + strand at 2184.351 kb on + strand at 2184.352 kb on - strand at 2184.352 kb on - strand at 2184.352 kb on - strand at 2184.352 kb on - strand at 2184.439 kb on + strand at 2184.449 kb on + strand at 2184.449 kb on + strand at 2184.449 kb on + strand at 2184.449 kb on + strand at 2184.450 kb on - strand at 2184.451 kb on + strand at 2184.542 kb on - strand at 2184.542 kb on - strand at 2184.571 kb on - strand at 2184.599 kb on + strand at 2184.600 kb on - strand at 2184.600 kb on - strand at 2184.619 kb on + strand at 2184.619 kb on + strand at 2184.620 kb on - strand at 2184.624 kb on + strand at 2184.624 kb on + strand at 2184.624 kb on + strand at 2184.625 kb on - strand at 2184.625 kb on - strand at 2184.772 kb on + strand at 2184.803 kb on - strand, within OHPLBJKB_02109 at 2184.803 kb on - strand, within OHPLBJKB_02109 at 2184.806 kb on + strand, within OHPLBJKB_02109 at 2184.807 kb on - strand, within OHPLBJKB_02109 at 2184.981 kb on - strand, within OHPLBJKB_02109 at 2185.002 kb on + strand, within OHPLBJKB_02109 at 2185.003 kb on - strand, within OHPLBJKB_02109 at 2185.006 kb on + strand, within OHPLBJKB_02109 at 2185.007 kb on - strand, within OHPLBJKB_02109 at 2185.007 kb on - strand, within OHPLBJKB_02109 at 2185.007 kb on - strand, within OHPLBJKB_02109 at 2185.007 kb on - strand, within OHPLBJKB_02109 at 2185.097 kb on + strand, within OHPLBJKB_02109 at 2185.098 kb on - strand, within OHPLBJKB_02109 at 2185.098 kb on - strand, within OHPLBJKB_02109 at 2185.115 kb on - strand, within OHPLBJKB_02109 at 2185.118 kb on + strand, within OHPLBJKB_02109 at 2185.119 kb on - strand, within OHPLBJKB_02109 at 2185.119 kb on - strand, within OHPLBJKB_02109 at 2185.140 kb on + strand, within OHPLBJKB_02109 at 2185.140 kb on + strand, within OHPLBJKB_02109 at 2185.140 kb on + strand, within OHPLBJKB_02109 at 2185.141 kb on - strand, within OHPLBJKB_02109 at 2185.403 kb on + strand, within OHPLBJKB_02109 at 2185.403 kb on + strand, within OHPLBJKB_02109 at 2185.403 kb on + strand, within OHPLBJKB_02109 at 2185.403 kb on + strand, within OHPLBJKB_02109 at 2185.403 kb on + strand, within OHPLBJKB_02109 at 2185.403 kb on + strand, within OHPLBJKB_02109 at 2185.403 kb on + strand, within OHPLBJKB_02109 at 2185.408 kb on + strand, within OHPLBJKB_02109 at 2185.408 kb on + strand, within OHPLBJKB_02109 at 2185.409 kb on - strand, within OHPLBJKB_02109 at 2185.600 kb on + strand, within OHPLBJKB_02109 at 2185.601 kb on - strand, within OHPLBJKB_02109 at 2185.616 kb on + strand, within OHPLBJKB_02109 at 2185.743 kb on - strand, within OHPLBJKB_02109 at 2185.786 kb on - strand, within OHPLBJKB_02109 at 2185.890 kb on - strand, within OHPLBJKB_02109 at 2185.956 kb on + strand, within OHPLBJKB_02109 at 2185.956 kb on + strand, within OHPLBJKB_02109 at 2185.957 kb on - strand, within OHPLBJKB_02109 at 2185.957 kb on - strand, within OHPLBJKB_02109 at 2186.033 kb on + strand, within OHPLBJKB_02109 at 2186.034 kb on - strand, within OHPLBJKB_02109 at 2186.034 kb on - strand, within OHPLBJKB_02109 at 2186.133 kb on - strand, within OHPLBJKB_02109 at 2186.143 kb on + strand, within OHPLBJKB_02109 at 2186.143 kb on + strand, within OHPLBJKB_02109 at 2186.168 kb on + strand, within OHPLBJKB_02109 at 2186.168 kb on + strand, within OHPLBJKB_02109 at 2186.192 kb on + strand, within OHPLBJKB_02109 at 2186.193 kb on - strand, within OHPLBJKB_02109 at 2186.212 kb on + strand, within OHPLBJKB_02109 at 2186.216 kb on + strand, within OHPLBJKB_02109 at 2186.216 kb on + strand, within OHPLBJKB_02109 at 2186.217 kb on - strand, within OHPLBJKB_02109 at 2186.217 kb on - strand, within OHPLBJKB_02109 at 2186.217 kb on - strand, within OHPLBJKB_02109 at 2186.217 kb on - strand, within OHPLBJKB_02109 at 2186.298 kb on + strand at 2186.298 kb on + strand at 2186.298 kb on + strand at 2186.298 kb on + strand at 2186.299 kb on - strand at 2186.530 kb on + strand at 2186.530 kb on + strand at 2186.530 kb on + strand at 2186.531 kb on - strand at 2186.673 kb on - strand, within OHPLBJKB_02110 at 2186.745 kb on + strand, within OHPLBJKB_02110 at 2186.758 kb on + strand, within OHPLBJKB_02110 at 2186.758 kb on + strand, within OHPLBJKB_02110 at 2186.758 kb on + strand, within OHPLBJKB_02110 at 2186.759 kb on - strand, within OHPLBJKB_02110 at 2186.759 kb on - strand, within OHPLBJKB_02110 at 2186.759 kb on - strand, within OHPLBJKB_02110 at 2186.759 kb on - strand, within OHPLBJKB_02110 at 2186.759 kb on - strand, within OHPLBJKB_02110 at 2186.764 kb on + strand, within OHPLBJKB_02110 at 2186.765 kb on - strand, within OHPLBJKB_02110 at 2186.765 kb on - strand, within OHPLBJKB_02110 at 2186.773 kb on + strand, within OHPLBJKB_02110 at 2186.774 kb on - strand, within OHPLBJKB_02110 at 2186.808 kb on + strand, within OHPLBJKB_02110 at 2186.937 kb on + strand, within OHPLBJKB_02110 at 2187.016 kb on + strand, within OHPLBJKB_02110 at 2187.016 kb on + strand, within OHPLBJKB_02110 at 2187.016 kb on + strand, within OHPLBJKB_02110 at 2187.017 kb on - strand, within OHPLBJKB_02110 at 2187.017 kb on - strand, within OHPLBJKB_02110 at 2187.017 kb on - strand, within OHPLBJKB_02110 at 2187.053 kb on + strand, within OHPLBJKB_02110 at 2187.053 kb on + strand, within OHPLBJKB_02110 at 2187.053 kb on + strand, within OHPLBJKB_02110 at 2187.053 kb on + strand, within OHPLBJKB_02110 at 2187.054 kb on - strand, within OHPLBJKB_02110 at 2187.054 kb on - strand, within OHPLBJKB_02110 at 2187.054 kb on - strand, within OHPLBJKB_02110 at 2187.058 kb on - strand, within OHPLBJKB_02110 at 2187.081 kb on + strand, within OHPLBJKB_02110 at 2187.120 kb on + strand, within OHPLBJKB_02110 at 2187.120 kb on + strand, within OHPLBJKB_02110 at 2187.120 kb on + strand, within OHPLBJKB_02110 at 2187.121 kb on - strand, within OHPLBJKB_02110 at 2187.187 kb on + strand, within OHPLBJKB_02110 at 2187.187 kb on + strand, within OHPLBJKB_02110 at 2187.188 kb on - strand, within OHPLBJKB_02110 at 2187.196 kb on + strand, within OHPLBJKB_02110 at 2187.197 kb on - strand, within OHPLBJKB_02110 at 2187.197 kb on - strand, within OHPLBJKB_02110 at 2187.256 kb on - strand, within OHPLBJKB_02110 at 2187.312 kb on + strand, within OHPLBJKB_02110 at 2187.349 kb on + strand, within OHPLBJKB_02110
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,183,627 + -0.2 2,183,627 + +0.5 2,183,627 + -0.6 2,183,627 + -0.3 2,183,628 - -0.8 2,183,628 - +0.9 2,183,628 - +0.3 2,183,628 - +0.2 2,183,628 - -0.9 2,183,784 - OHPLBJKB_02108 0.23 +0.3 2,183,784 - OHPLBJKB_02108 0.23 -0.4 2,183,825 - OHPLBJKB_02108 0.30 +0.1 2,183,825 - OHPLBJKB_02108 0.30 -0.2 2,183,894 + OHPLBJKB_02108 0.42 -1.2 2,183,894 + OHPLBJKB_02108 0.42 -0.6 2,183,894 + OHPLBJKB_02108 0.42 -0.7 2,183,894 + OHPLBJKB_02108 0.42 +0.6 2,183,894 + OHPLBJKB_02108 0.42 -0.5 2,183,894 + OHPLBJKB_02108 0.42 -0.4 2,183,895 - OHPLBJKB_02108 0.42 -1.0 2,183,895 - OHPLBJKB_02108 0.42 +0.1 2,183,895 - OHPLBJKB_02108 0.42 -0.9 2,183,895 - OHPLBJKB_02108 0.42 +0.6 2,183,896 + OHPLBJKB_02108 0.42 -1.4 2,183,897 - OHPLBJKB_02108 0.42 -1.6 2,183,897 - OHPLBJKB_02108 0.42 +0.4 2,183,897 - OHPLBJKB_02108 0.42 -0.6 2,184,011 - OHPLBJKB_02108 0.62 +0.7 2,184,017 - OHPLBJKB_02108 0.63 -0.1 2,184,017 - OHPLBJKB_02108 0.63 -0.2 2,184,017 - OHPLBJKB_02108 0.63 +1.4 2,184,216 + -0.4 2,184,259 - +0.5 2,184,259 - -0.8 2,184,282 + +1.3 2,184,283 - +0.4 2,184,283 - +0.7 2,184,351 + +1.2 2,184,351 + +1.4 2,184,351 + +0.3 2,184,351 + -1.7 2,184,351 + -0.7 2,184,351 + -0.4 2,184,352 - -0.1 2,184,352 - +1.6 2,184,352 - -0.7 2,184,352 - -0.9 2,184,439 + -0.6 2,184,449 + -0.7 2,184,449 + +0.3 2,184,449 + -0.3 2,184,449 + -0.2 2,184,450 - -0.4 2,184,451 + -0.9 2,184,542 - -0.2 2,184,542 - -0.5 2,184,571 - -0.7 2,184,599 + -1.2 2,184,600 - +1.3 2,184,600 - +0.0 2,184,619 + -0.2 2,184,619 + +1.4 2,184,620 - -0.7 2,184,624 + -1.0 2,184,624 + +0.1 2,184,624 + -2.2 2,184,625 - +0.3 2,184,625 - -0.2 2,184,772 + +0.4 2,184,803 - OHPLBJKB_02109 0.10 +0.4 2,184,803 - OHPLBJKB_02109 0.10 +0.1 2,184,806 + OHPLBJKB_02109 0.10 -0.4 2,184,807 - OHPLBJKB_02109 0.10 -0.8 2,184,981 - OHPLBJKB_02109 0.20 +0.1 2,185,002 + OHPLBJKB_02109 0.21 +0.2 2,185,003 - OHPLBJKB_02109 0.21 -0.2 2,185,006 + OHPLBJKB_02109 0.21 -0.2 2,185,007 - OHPLBJKB_02109 0.21 -0.2 2,185,007 - OHPLBJKB_02109 0.21 +0.2 2,185,007 - OHPLBJKB_02109 0.21 -0.2 2,185,007 - OHPLBJKB_02109 0.21 +1.1 2,185,097 + OHPLBJKB_02109 0.26 +0.5 2,185,098 - OHPLBJKB_02109 0.26 -1.0 2,185,098 - OHPLBJKB_02109 0.26 -0.9 2,185,115 - OHPLBJKB_02109 0.27 -0.4 2,185,118 + OHPLBJKB_02109 0.27 +0.3 2,185,119 - OHPLBJKB_02109 0.28 -0.0 2,185,119 - OHPLBJKB_02109 0.28 +0.4 2,185,140 + OHPLBJKB_02109 0.29 -0.4 2,185,140 + OHPLBJKB_02109 0.29 -0.6 2,185,140 + OHPLBJKB_02109 0.29 +0.6 2,185,141 - OHPLBJKB_02109 0.29 -0.6 2,185,403 + OHPLBJKB_02109 0.43 -0.4 2,185,403 + OHPLBJKB_02109 0.43 +0.2 2,185,403 + OHPLBJKB_02109 0.43 -0.5 2,185,403 + OHPLBJKB_02109 0.43 +0.4 2,185,403 + OHPLBJKB_02109 0.43 +0.3 2,185,403 + OHPLBJKB_02109 0.43 +0.0 2,185,403 + OHPLBJKB_02109 0.43 +0.4 2,185,408 + OHPLBJKB_02109 0.43 +0.0 2,185,408 + OHPLBJKB_02109 0.43 +0.7 2,185,409 - OHPLBJKB_02109 0.44 +1.0 2,185,600 + OHPLBJKB_02109 0.54 -1.3 2,185,601 - OHPLBJKB_02109 0.54 -0.4 2,185,616 + OHPLBJKB_02109 0.55 +0.6 2,185,743 - OHPLBJKB_02109 0.62 -0.6 2,185,786 - OHPLBJKB_02109 0.64 +2.6 2,185,890 - OHPLBJKB_02109 0.70 +0.3 2,185,956 + OHPLBJKB_02109 0.74 -0.8 2,185,956 + OHPLBJKB_02109 0.74 -1.3 2,185,957 - OHPLBJKB_02109 0.74 +0.0 2,185,957 - OHPLBJKB_02109 0.74 +1.0 2,186,033 + OHPLBJKB_02109 0.78 -0.4 2,186,034 - OHPLBJKB_02109 0.78 +1.0 2,186,034 - OHPLBJKB_02109 0.78 -0.0 2,186,133 - OHPLBJKB_02109 0.83 -1.0 2,186,143 + OHPLBJKB_02109 0.84 -0.7 2,186,143 + OHPLBJKB_02109 0.84 -1.0 2,186,168 + OHPLBJKB_02109 0.85 -0.4 2,186,168 + OHPLBJKB_02109 0.85 +1.4 2,186,192 + OHPLBJKB_02109 0.87 -0.6 2,186,193 - OHPLBJKB_02109 0.87 +0.1 2,186,212 + OHPLBJKB_02109 0.88 -0.4 2,186,216 + OHPLBJKB_02109 0.88 -2.0 2,186,216 + OHPLBJKB_02109 0.88 -0.5 2,186,217 - OHPLBJKB_02109 0.88 -1.8 2,186,217 - OHPLBJKB_02109 0.88 +0.1 2,186,217 - OHPLBJKB_02109 0.88 +1.4 2,186,217 - OHPLBJKB_02109 0.88 +0.2 2,186,298 + +0.3 2,186,298 + +1.3 2,186,298 + +0.2 2,186,298 + -1.0 2,186,299 - +0.4 2,186,530 + -0.2 2,186,530 + +0.6 2,186,530 + -0.3 2,186,531 - +0.1 2,186,673 - OHPLBJKB_02110 0.18 +1.3 2,186,745 + OHPLBJKB_02110 0.23 -0.0 2,186,758 + OHPLBJKB_02110 0.24 -1.0 2,186,758 + OHPLBJKB_02110 0.24 -1.9 2,186,758 + OHPLBJKB_02110 0.24 +0.3 2,186,759 - OHPLBJKB_02110 0.24 -0.0 2,186,759 - OHPLBJKB_02110 0.24 +0.6 2,186,759 - OHPLBJKB_02110 0.24 +0.3 2,186,759 - OHPLBJKB_02110 0.24 -0.1 2,186,759 - OHPLBJKB_02110 0.24 -0.7 2,186,764 + OHPLBJKB_02110 0.24 +0.8 2,186,765 - OHPLBJKB_02110 0.25 +0.9 2,186,765 - OHPLBJKB_02110 0.25 -0.7 2,186,773 + OHPLBJKB_02110 0.25 -0.7 2,186,774 - OHPLBJKB_02110 0.25 -0.9 2,186,808 + OHPLBJKB_02110 0.28 -1.1 2,186,937 + OHPLBJKB_02110 0.37 -0.6 2,187,016 + OHPLBJKB_02110 0.43 +0.6 2,187,016 + OHPLBJKB_02110 0.43 +0.0 2,187,016 + OHPLBJKB_02110 0.43 -0.2 2,187,017 - OHPLBJKB_02110 0.43 -0.3 2,187,017 - OHPLBJKB_02110 0.43 -1.9 2,187,017 - OHPLBJKB_02110 0.43 +1.1 2,187,053 + OHPLBJKB_02110 0.45 -1.7 2,187,053 + OHPLBJKB_02110 0.45 +0.0 2,187,053 + OHPLBJKB_02110 0.45 -0.2 2,187,053 + OHPLBJKB_02110 0.45 +0.2 2,187,054 - OHPLBJKB_02110 0.46 +0.5 2,187,054 - OHPLBJKB_02110 0.46 +0.8 2,187,054 - OHPLBJKB_02110 0.46 -0.3 2,187,058 - OHPLBJKB_02110 0.46 -1.3 2,187,081 + OHPLBJKB_02110 0.48 -0.8 2,187,120 + OHPLBJKB_02110 0.50 +1.0 2,187,120 + OHPLBJKB_02110 0.50 +1.2 2,187,120 + OHPLBJKB_02110 0.50 +0.8 2,187,121 - OHPLBJKB_02110 0.50 -1.4 2,187,187 + OHPLBJKB_02110 0.55 -0.5 2,187,187 + OHPLBJKB_02110 0.55 -0.2 2,187,188 - OHPLBJKB_02110 0.55 +0.6 2,187,196 + OHPLBJKB_02110 0.56 -0.7 2,187,197 - OHPLBJKB_02110 0.56 -0.1 2,187,197 - OHPLBJKB_02110 0.56 +0.8 2,187,256 - OHPLBJKB_02110 0.60 +0.1 2,187,312 + OHPLBJKB_02110 0.64 +0.3 2,187,349 + OHPLBJKB_02110 0.67 -0.9
Or see this region's nucleotide sequence