Strain Fitness in Escherichia coli ECRC100 around OKFHMN_18415

Experiment: EV146

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EV146
3,573,501	-	tdcD	OKFHMN_18410	0.33	-0.5
3,573,569	-	tdcD	OKFHMN_18410	0.38	-1.9
3,573,647	-	tdcD	OKFHMN_18410	0.45	-0.1
3,573,914	+	tdcD	OKFHMN_18410	0.67	+0.5
3,573,915	-	tdcD	OKFHMN_18410	0.67	+0.8
3,573,918	+	tdcD	OKFHMN_18410	0.67	+0.9
3,574,049	+	tdcD	OKFHMN_18410	0.78	-1.0
3,574,137	-	tdcD	OKFHMN_18410	0.85	+0.0
3,574,431	+				+1.2
3,574,460	-				-0.8
3,574,460	-				-0.2
3,574,549	-				+0.4
3,574,590	+	tdcE	OKFHMN_18415	0.11	+0.7
3,574,626	+	tdcE	OKFHMN_18415	0.12	+1.2
3,574,805	+	tdcE	OKFHMN_18415	0.20	-0.4
3,574,817	-	tdcE	OKFHMN_18415	0.20	+0.1
3,574,827	+	tdcE	OKFHMN_18415	0.21	+1.7
3,574,933	+	tdcE	OKFHMN_18415	0.25	+0.8
3,574,934	-	tdcE	OKFHMN_18415	0.26	+1.7
3,575,218	+	tdcE	OKFHMN_18415	0.38	-0.3
3,575,219	+	tdcE	OKFHMN_18415	0.38	-0.6
3,575,219	-	tdcE	OKFHMN_18415	0.38	-2.1
3,575,219	-	tdcE	OKFHMN_18415	0.38	+0.2
3,575,219	-	tdcE	OKFHMN_18415	0.38	+0.2
3,575,235	+	tdcE	OKFHMN_18415	0.39	-0.6
3,575,469	+	tdcE	OKFHMN_18415	0.49	-0.0
3,575,519	-	tdcE	OKFHMN_18415	0.51	-0.8
3,575,558	-	tdcE	OKFHMN_18415	0.53	+0.1
3,575,581	-	tdcE	OKFHMN_18415	0.54	+0.8
3,575,641	-	tdcE	OKFHMN_18415	0.56	-1.3
3,575,693	-	tdcE	OKFHMN_18415	0.59	+1.0
3,575,776	+	tdcE	OKFHMN_18415	0.62	+1.6
3,575,830	+	tdcE	OKFHMN_18415	0.65	+0.3
3,575,857	+	tdcE	OKFHMN_18415	0.66	-0.0
3,575,858	-	tdcE	OKFHMN_18415	0.66	-0.2
3,575,872	+	tdcE	OKFHMN_18415	0.66	+0.1
3,575,878	+	tdcE	OKFHMN_18415	0.67	+0.7
3,575,917	+	tdcE	OKFHMN_18415	0.68	-0.6
3,575,984	-	tdcE	OKFHMN_18415	0.71	-0.1
3,576,160	-	tdcE	OKFHMN_18415	0.79	-2.4
3,576,178	-	tdcE	OKFHMN_18415	0.80	-0.2
3,576,334	+	tdcE	OKFHMN_18415	0.87	-0.6
3,576,334	+	tdcE	OKFHMN_18415	0.87	+0.9
3,576,406	-	tdcE	OKFHMN_18415	0.90	-1.7
3,576,406	-	tdcE	OKFHMN_18415	0.90	-1.1
3,576,437	-				-0.0
3,576,613	-				+1.1
3,576,613	-				+0.4
3,576,613	-				-0.2
3,576,621	+				+0.3
3,576,704	+	tdcF	OKFHMN_18420	0.12	-0.4
3,576,810	+	tdcF	OKFHMN_18420	0.39	+0.0
3,576,927	-	tdcF	OKFHMN_18420	0.69	+0.4
3,576,927	-	tdcF	OKFHMN_18420	0.69	-1.3
3,576,978	+	tdcF	OKFHMN_18420	0.83	-0.9
3,576,979	-	tdcF	OKFHMN_18420	0.83	-0.6
3,577,025	-				-0.3
3,577,033	-				-0.5
3,577,036	+				+0.2
3,577,037	-				-0.4
3,577,037	-				-1.3
3,577,068	+				+0.5
3,577,069	-				-0.9
3,577,122	+				-0.8
3,577,122	+				-0.2
3,577,122	+				-0.0
3,577,122	+				+0.0
3,577,123	-				+0.0
3,577,123	-				+0.4
3,577,170	+				+0.7
3,577,171	-				+0.1
3,577,204	-				-0.0
3,577,221	+				-0.9
3,577,229	+				-0.3
3,577,375	-	tdcG	OKFHMN_18425	0.19	+0.6
3,577,376	+	tdcG	OKFHMN_18425	0.19	-0.1
3,577,376	+	tdcG	OKFHMN_18425	0.19	-0.4
3,577,376	+	tdcG	OKFHMN_18425	0.19	-0.2
3,577,377	-	tdcG	OKFHMN_18425	0.19	-1.6
3,577,382	+	tdcG	OKFHMN_18425	0.19	+1.6
3,577,383	-	tdcG	OKFHMN_18425	0.19	+0.3
3,577,383	-	tdcG	OKFHMN_18425	0.19	-0.3
3,577,383	-	tdcG	OKFHMN_18425	0.19	+0.6
3,577,383	-	tdcG	OKFHMN_18425	0.19	-0.1
3,577,425	+	tdcG	OKFHMN_18425	0.23	+0.3
3,577,455	+	tdcG	OKFHMN_18425	0.25	-0.7
3,577,456	-	tdcG	OKFHMN_18425	0.25	-0.5
3,577,529	+	tdcG	OKFHMN_18425	0.30	-0.3
3,577,529	+	tdcG	OKFHMN_18425	0.30	-0.7
3,577,529	+	tdcG	OKFHMN_18425	0.30	+0.4
3,577,530	-	tdcG	OKFHMN_18425	0.30	-0.5
3,577,530	-	tdcG	OKFHMN_18425	0.30	+0.1
3,577,533	-	tdcG	OKFHMN_18425	0.30	+0.4
3,577,543	+	tdcG	OKFHMN_18425	0.31	+0.4
3,577,546	+	tdcG	OKFHMN_18425	0.31	-0.1
3,577,566	+	tdcG	OKFHMN_18425	0.33	-0.5
3,577,567	-	tdcG	OKFHMN_18425	0.33	-0.6
3,577,616	+	tdcG	OKFHMN_18425	0.37	-1.9
3,577,621	+	tdcG	OKFHMN_18425	0.37	+0.5