Experiment: EV146
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKFHMN_11680 and zorA are separated by 211 nucleotides zorA and zorB are separated by 6 nucleotides zorB and zorE are separated by 3 nucleotides
OKFHMN_11680: OKFHMN_11680 - hypothetical protein, at 2,234,284 to 2,237,643
_11680
OKFHMN_11685: zorA - Zorya protein ZorA, at 2,237,855 to 2,239,507
zorA
OKFHMN_11690: zorB - Zorya protein ZorB, at 2,239,514 to 2,240,221
zorB
OKFHMN_11695: zorE - Zorya protein ZorE, at 2,240,225 to 2,241,328
zorE
Position (kb)
2237
2238
2239
2240 Strain fitness (log2 ratio)
-1
0
1
2 at 2236.886 kb on - strand, within OKFHMN_11680 at 2236.906 kb on + strand, within OKFHMN_11680 at 2236.983 kb on + strand, within OKFHMN_11680 at 2236.983 kb on + strand, within OKFHMN_11680 at 2236.983 kb on + strand, within OKFHMN_11680 at 2236.984 kb on - strand, within OKFHMN_11680 at 2237.010 kb on + strand, within OKFHMN_11680 at 2237.010 kb on + strand, within OKFHMN_11680 at 2237.028 kb on + strand, within OKFHMN_11680 at 2237.171 kb on + strand, within OKFHMN_11680 at 2237.173 kb on + strand, within OKFHMN_11680 at 2237.173 kb on + strand, within OKFHMN_11680 at 2237.174 kb on - strand, within OKFHMN_11680 at 2237.262 kb on - strand, within OKFHMN_11680 at 2237.287 kb on + strand, within OKFHMN_11680 at 2237.401 kb on - strand at 2237.429 kb on + strand at 2237.429 kb on + strand at 2237.431 kb on + strand at 2237.432 kb on - strand at 2237.432 kb on - strand at 2237.432 kb on - strand at 2237.437 kb on - strand at 2237.454 kb on - strand at 2237.493 kb on - strand at 2237.493 kb on - strand at 2237.549 kb on + strand at 2237.550 kb on - strand at 2237.550 kb on - strand at 2237.550 kb on - strand at 2237.601 kb on + strand at 2237.676 kb on + strand at 2237.679 kb on + strand at 2237.680 kb on - strand at 2237.735 kb on - strand at 2237.829 kb on + strand at 2237.915 kb on - strand at 2237.976 kb on + strand at 2238.250 kb on + strand, within zorA at 2238.476 kb on - strand, within zorA at 2238.912 kb on + strand, within zorA at 2239.053 kb on + strand, within zorA at 2239.054 kb on - strand, within zorA at 2239.311 kb on + strand, within zorA at 2239.526 kb on - strand at 2239.631 kb on + strand, within zorB at 2239.702 kb on - strand, within zorB at 2240.095 kb on - strand, within zorB at 2240.329 kb on + strand at 2240.362 kb on + strand, within zorE
Per-strain Table
Position Strand Gene LocusTag Fraction EV146 remove 2,236,886 - OKFHMN_11680 0.77 -1.7 2,236,906 + OKFHMN_11680 0.78 +0.4 2,236,983 + OKFHMN_11680 0.80 +0.4 2,236,983 + OKFHMN_11680 0.80 -0.9 2,236,983 + OKFHMN_11680 0.80 -0.5 2,236,984 - OKFHMN_11680 0.80 +1.0 2,237,010 + OKFHMN_11680 0.81 -0.2 2,237,010 + OKFHMN_11680 0.81 -0.0 2,237,028 + OKFHMN_11680 0.82 -0.2 2,237,171 + OKFHMN_11680 0.86 -1.2 2,237,173 + OKFHMN_11680 0.86 +0.6 2,237,173 + OKFHMN_11680 0.86 -0.9 2,237,174 - OKFHMN_11680 0.86 -1.6 2,237,262 - OKFHMN_11680 0.89 +0.5 2,237,287 + OKFHMN_11680 0.89 -0.8 2,237,401 - -0.3 2,237,429 + +0.1 2,237,429 + -1.1 2,237,431 + +0.6 2,237,432 - -0.3 2,237,432 - +0.8 2,237,432 - +1.1 2,237,437 - -0.8 2,237,454 - +0.7 2,237,493 - +0.5 2,237,493 - -0.7 2,237,549 + -0.5 2,237,550 - -0.6 2,237,550 - -0.9 2,237,550 - -0.4 2,237,601 + +1.6 2,237,676 + +0.4 2,237,679 + +0.1 2,237,680 - -1.2 2,237,735 - +0.0 2,237,829 + -0.1 2,237,915 - -0.3 2,237,976 + -0.4 2,238,250 + zorA OKFHMN_11685 0.24 -0.3 2,238,476 - zorA OKFHMN_11685 0.38 +0.2 2,238,912 + zorA OKFHMN_11685 0.64 -0.3 2,239,053 + zorA OKFHMN_11685 0.72 -1.0 2,239,054 - zorA OKFHMN_11685 0.73 -0.4 2,239,311 + zorA OKFHMN_11685 0.88 -1.4 2,239,526 - +0.9 2,239,631 + zorB OKFHMN_11690 0.17 +0.1 2,239,702 - zorB OKFHMN_11690 0.27 +0.6 2,240,095 - zorB OKFHMN_11690 0.82 +2.0 2,240,329 + +1.0 2,240,362 + zorE OKFHMN_11695 0.12 -0.1
Or see this region's nucleotide sequence