Strain Fitness in Escherichia coli ECRC100 around OKFHMN_09850

Experiment: EV146

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EV146
1,838,957	+	hcp2,tssD2	OKFHMN_09845	0.82	+0.3
1,838,983	-	hcp2,tssD2	OKFHMN_09845	0.87	-0.6
1,838,997	+				-0.1
1,839,031	-				-0.1
1,839,032	+				-0.3
1,839,033	-				-1.7
1,839,077	+				+0.4
1,839,077	+				-0.7
1,839,077	+				+0.2
1,839,078	-				-0.2
1,839,078	-				+0.4
1,839,078	-				-1.9
1,839,078	-				-0.2
1,839,078	-				+1.3
1,839,081	-				+0.1
1,839,085	-				-0.4
1,839,236	-				-0.0
1,839,785	+				+0.3
1,839,788	+				+0.2
1,839,791	+				-2.0
1,839,798	+	tssB	OKFHMN_09850	0.11	+0.9
1,839,875	+	tssB	OKFHMN_09850	0.26	+0.2
1,839,875	+	tssB	OKFHMN_09850	0.26	-0.8
1,840,164	-	tssB	OKFHMN_09850	0.84	+0.4
1,840,309	+		OKFHMN_09855	0.13	+0.5
1,840,310	-		OKFHMN_09855	0.14	+0.5
1,840,346	-		OKFHMN_09855	0.30	+0.4
1,840,422	+		OKFHMN_09855	0.64	+1.3
1,840,554	-				-0.1
1,840,982	+	tssC	OKFHMN_09860	0.31	-0.2
1,840,982	+	tssC	OKFHMN_09860	0.31	+0.8
1,841,050	-	tssC	OKFHMN_09860	0.36	+0.3
1,841,050	-	tssC	OKFHMN_09860	0.36	-1.0
1,841,091	+	tssC	OKFHMN_09860	0.39	+0.9
1,841,091	+	tssC	OKFHMN_09860	0.39	+1.0