Experiment: EV146
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt dsbG and ybdO are separated by 209 nucleotides ybdO and ybdN are separated by 146 nucleotides
OKFHMN_07515: dsbG - thiol:disulfide interchange protein DsbG, at 1,353,259 to 1,354,005
dsbG
OKFHMN_07520: ybdO - Uncharacterized HTH-type transcriptional regulator YbdO, at 1,354,215 to 1,355,117
ybdO
OKFHMN_07525: ybdN - Uncharacterized protein YbdN, at 1,355,264 to 1,356,484
ybdN
Position (kb) 1354
1355
1356 Strain fitness (log2 ratio) -1
0
1 at 1353.354 kb on + strand, within dsbG at 1353.355 kb on - strand, within dsbG at 1353.397 kb on + strand, within dsbG at 1353.433 kb on + strand, within dsbG at 1353.469 kb on + strand, within dsbG at 1353.613 kb on + strand, within dsbG at 1353.614 kb on - strand, within dsbG at 1353.614 kb on - strand, within dsbG at 1353.692 kb on + strand, within dsbG at 1353.822 kb on - strand, within dsbG at 1353.840 kb on - strand, within dsbG at 1353.844 kb on - strand, within dsbG at 1353.916 kb on - strand, within dsbG at 1353.920 kb on - strand, within dsbG at 1353.920 kb on - strand, within dsbG at 1353.922 kb on + strand, within dsbG at 1354.317 kb on + strand, within ybdO at 1354.357 kb on + strand, within ybdO at 1354.518 kb on - strand, within ybdO at 1354.553 kb on + strand, within ybdO at 1354.942 kb on + strand, within ybdO at 1355.482 kb on + strand, within ybdN at 1355.486 kb on + strand, within ybdN at 1355.487 kb on - strand, within ybdN at 1355.510 kb on + strand, within ybdN at 1355.579 kb on + strand, within ybdN at 1355.580 kb on - strand, within ybdN at 1355.580 kb on - strand, within ybdN at 1355.777 kb on + strand, within ybdN at 1355.778 kb on - strand, within ybdN at 1355.842 kb on + strand, within ybdN at 1355.863 kb on + strand, within ybdN at 1355.863 kb on + strand, within ybdN at 1355.863 kb on + strand, within ybdN at 1355.863 kb on + strand, within ybdN at 1355.863 kb on + strand, within ybdN at 1355.864 kb on - strand, within ybdN at 1355.952 kb on - strand, within ybdN at 1355.953 kb on + strand, within ybdN at 1355.958 kb on + strand, within ybdN at 1355.964 kb on - strand, within ybdN at 1355.989 kb on + strand, within ybdN
Per-strain Table
Position Strand Gene LocusTag Fraction EV146 remove 1,353,354 + dsbG OKFHMN_07515 0.13 +1.0 1,353,355 - dsbG OKFHMN_07515 0.13 +0.6 1,353,397 + dsbG OKFHMN_07515 0.18 +0.3 1,353,433 + dsbG OKFHMN_07515 0.23 -0.3 1,353,469 + dsbG OKFHMN_07515 0.28 -0.8 1,353,613 + dsbG OKFHMN_07515 0.47 -1.7 1,353,614 - dsbG OKFHMN_07515 0.48 -1.5 1,353,614 - dsbG OKFHMN_07515 0.48 +0.4 1,353,692 + dsbG OKFHMN_07515 0.58 -0.4 1,353,822 - dsbG OKFHMN_07515 0.75 +1.7 1,353,840 - dsbG OKFHMN_07515 0.78 +0.6 1,353,844 - dsbG OKFHMN_07515 0.78 -0.3 1,353,916 - dsbG OKFHMN_07515 0.88 +0.4 1,353,920 - dsbG OKFHMN_07515 0.88 +0.0 1,353,920 - dsbG OKFHMN_07515 0.88 +0.1 1,353,922 + dsbG OKFHMN_07515 0.89 -0.2 1,354,317 + ybdO OKFHMN_07520 0.11 -0.3 1,354,357 + ybdO OKFHMN_07520 0.16 -0.3 1,354,518 - ybdO OKFHMN_07520 0.34 -0.6 1,354,553 + ybdO OKFHMN_07520 0.37 +0.0 1,354,942 + ybdO OKFHMN_07520 0.81 +0.1 1,355,482 + ybdN OKFHMN_07525 0.18 -1.0 1,355,486 + ybdN OKFHMN_07525 0.18 -0.6 1,355,487 - ybdN OKFHMN_07525 0.18 -1.0 1,355,510 + ybdN OKFHMN_07525 0.20 -0.1 1,355,579 + ybdN OKFHMN_07525 0.26 -0.6 1,355,580 - ybdN OKFHMN_07525 0.26 +0.0 1,355,580 - ybdN OKFHMN_07525 0.26 +0.6 1,355,777 + ybdN OKFHMN_07525 0.42 -0.3 1,355,778 - ybdN OKFHMN_07525 0.42 -0.4 1,355,842 + ybdN OKFHMN_07525 0.47 -0.2 1,355,863 + ybdN OKFHMN_07525 0.49 +0.1 1,355,863 + ybdN OKFHMN_07525 0.49 +0.1 1,355,863 + ybdN OKFHMN_07525 0.49 -0.7 1,355,863 + ybdN OKFHMN_07525 0.49 -0.5 1,355,863 + ybdN OKFHMN_07525 0.49 +0.6 1,355,864 - ybdN OKFHMN_07525 0.49 +1.0 1,355,952 - ybdN OKFHMN_07525 0.56 +1.2 1,355,953 + ybdN OKFHMN_07525 0.56 +0.3 1,355,958 + ybdN OKFHMN_07525 0.57 +0.0 1,355,964 - ybdN OKFHMN_07525 0.57 +0.0 1,355,989 + ybdN OKFHMN_07525 0.59 -0.2
Or see this region's nucleotide sequence