Experiment: EV146
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt zorC and zorD overlap by 1 nucleotides zorD and OKFHMN_05765 are separated by 576 nucleotides
OKFHMN_05755: zorC - Zorya protein ZorC, at 1,002,434 to 1,004,116
zorC
OKFHMN_05760: zorD - Zorya protein ZorD, at 1,004,116 to 1,007,358
zorD
OKFHMN_05765: OKFHMN_05765 - Inovirus Gp2 family protein, at 1,007,935 to 1,008,498
_05765
Position (kb)
1004
1005
1006
1007
1008 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1003.168 kb on - strand, within zorC at 1003.284 kb on - strand, within zorC at 1003.318 kb on + strand, within zorC at 1003.331 kb on + strand, within zorC at 1003.332 kb on - strand, within zorC at 1003.332 kb on - strand, within zorC at 1003.446 kb on - strand, within zorC at 1003.483 kb on + strand, within zorC at 1003.565 kb on + strand, within zorC at 1003.569 kb on + strand, within zorC at 1003.569 kb on + strand, within zorC at 1003.658 kb on + strand, within zorC at 1003.658 kb on + strand, within zorC at 1003.664 kb on + strand, within zorC at 1003.783 kb on + strand, within zorC at 1003.831 kb on - strand, within zorC at 1003.834 kb on + strand, within zorC at 1003.835 kb on - strand, within zorC at 1003.950 kb on + strand at 1003.950 kb on + strand at 1003.950 kb on + strand at 1003.969 kb on + strand at 1003.969 kb on + strand at 1003.999 kb on + strand at 1004.019 kb on + strand at 1004.019 kb on + strand at 1004.030 kb on - strand at 1004.062 kb on - strand at 1004.185 kb on + strand at 1004.287 kb on + strand at 1004.302 kb on - strand at 1004.333 kb on + strand at 1004.334 kb on - strand at 1004.334 kb on - strand at 1004.379 kb on + strand at 1004.545 kb on + strand, within zorD at 1004.545 kb on + strand, within zorD at 1004.739 kb on - strand, within zorD at 1004.853 kb on + strand, within zorD at 1004.858 kb on - strand, within zorD at 1004.996 kb on - strand, within zorD at 1004.997 kb on + strand, within zorD at 1004.998 kb on - strand, within zorD at 1005.274 kb on + strand, within zorD at 1005.560 kb on + strand, within zorD at 1005.574 kb on - strand, within zorD at 1005.602 kb on - strand, within zorD at 1005.632 kb on + strand, within zorD at 1005.855 kb on + strand, within zorD at 1005.879 kb on - strand, within zorD at 1005.945 kb on + strand, within zorD at 1006.053 kb on + strand, within zorD at 1006.087 kb on - strand, within zorD at 1006.241 kb on - strand, within zorD at 1006.466 kb on + strand, within zorD at 1006.467 kb on - strand, within zorD at 1006.487 kb on - strand, within zorD at 1006.743 kb on - strand, within zorD at 1006.867 kb on - strand, within zorD at 1006.977 kb on + strand, within zorD at 1006.987 kb on - strand, within zorD at 1007.058 kb on + strand at 1007.201 kb on - strand at 1007.206 kb on + strand at 1007.206 kb on + strand at 1007.295 kb on + strand at 1007.307 kb on + strand at 1007.375 kb on + strand at 1007.490 kb on + strand at 1007.493 kb on + strand at 1007.702 kb on - strand at 1007.714 kb on - strand at 1007.747 kb on + strand at 1007.801 kb on - strand at 1007.838 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction EV146 remove 1,003,168 - zorC OKFHMN_05755 0.44 +1.3 1,003,284 - zorC OKFHMN_05755 0.51 -0.3 1,003,318 + zorC OKFHMN_05755 0.53 -0.3 1,003,331 + zorC OKFHMN_05755 0.53 -0.8 1,003,332 - zorC OKFHMN_05755 0.53 +1.7 1,003,332 - zorC OKFHMN_05755 0.53 +0.7 1,003,446 - zorC OKFHMN_05755 0.60 +0.1 1,003,483 + zorC OKFHMN_05755 0.62 +0.3 1,003,565 + zorC OKFHMN_05755 0.67 +1.1 1,003,569 + zorC OKFHMN_05755 0.67 -0.1 1,003,569 + zorC OKFHMN_05755 0.67 +0.3 1,003,658 + zorC OKFHMN_05755 0.73 +0.2 1,003,658 + zorC OKFHMN_05755 0.73 -0.1 1,003,664 + zorC OKFHMN_05755 0.73 -0.9 1,003,783 + zorC OKFHMN_05755 0.80 -0.9 1,003,831 - zorC OKFHMN_05755 0.83 -0.6 1,003,834 + zorC OKFHMN_05755 0.83 +0.2 1,003,835 - zorC OKFHMN_05755 0.83 +0.5 1,003,950 + +2.7 1,003,950 + -1.1 1,003,950 + +0.7 1,003,969 + +0.7 1,003,969 + +0.2 1,003,999 + -1.5 1,004,019 + +0.2 1,004,019 + +0.2 1,004,030 - +1.0 1,004,062 - +0.5 1,004,185 + +0.6 1,004,287 + -0.9 1,004,302 - +0.1 1,004,333 + +0.7 1,004,334 - -0.5 1,004,334 - +2.3 1,004,379 + +0.2 1,004,545 + zorD OKFHMN_05760 0.13 -2.0 1,004,545 + zorD OKFHMN_05760 0.13 -0.7 1,004,739 - zorD OKFHMN_05760 0.19 +0.1 1,004,853 + zorD OKFHMN_05760 0.23 +0.2 1,004,858 - zorD OKFHMN_05760 0.23 -1.1 1,004,996 - zorD OKFHMN_05760 0.27 +1.7 1,004,997 + zorD OKFHMN_05760 0.27 -0.0 1,004,998 - zorD OKFHMN_05760 0.27 -0.0 1,005,274 + zorD OKFHMN_05760 0.36 -0.4 1,005,560 + zorD OKFHMN_05760 0.45 -0.0 1,005,574 - zorD OKFHMN_05760 0.45 -0.2 1,005,602 - zorD OKFHMN_05760 0.46 +0.4 1,005,632 + zorD OKFHMN_05760 0.47 -0.7 1,005,855 + zorD OKFHMN_05760 0.54 +1.7 1,005,879 - zorD OKFHMN_05760 0.54 +0.4 1,005,945 + zorD OKFHMN_05760 0.56 -0.3 1,006,053 + zorD OKFHMN_05760 0.60 -0.1 1,006,087 - zorD OKFHMN_05760 0.61 -0.2 1,006,241 - zorD OKFHMN_05760 0.66 +0.6 1,006,466 + zorD OKFHMN_05760 0.72 +0.2 1,006,467 - zorD OKFHMN_05760 0.72 +0.2 1,006,487 - zorD OKFHMN_05760 0.73 -0.4 1,006,743 - zorD OKFHMN_05760 0.81 -0.0 1,006,867 - zorD OKFHMN_05760 0.85 +2.7 1,006,977 + zorD OKFHMN_05760 0.88 +0.8 1,006,987 - zorD OKFHMN_05760 0.89 +0.5 1,007,058 + -0.4 1,007,201 - +1.0 1,007,206 + +1.7 1,007,206 + +1.7 1,007,295 + +1.0 1,007,307 + +1.9 1,007,375 + +1.2 1,007,490 + -0.9 1,007,493 + -0.6 1,007,702 - -0.6 1,007,714 - +1.7 1,007,747 + -0.6 1,007,801 - +0.2 1,007,838 + +0.1
Or see this region's nucleotide sequence