Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03875 and OHPLBJKB_03876 are separated by 13 nucleotides OHPLBJKB_03876 and OHPLBJKB_03877 are separated by 264 nucleotides OHPLBJKB_03877 and OHPLBJKB_03878 are separated by 35 nucleotides OHPLBJKB_03878 and OHPLBJKB_03879 are separated by 36 nucleotides OHPLBJKB_03879 and OHPLBJKB_03880 are separated by 210 nucleotides
OHPLBJKB_03875: OHPLBJKB_03875 - Bifunctional NAD(P)H-hydrate repair enzyme Nnr, at 4,065,651 to 4,067,183
_03875
OHPLBJKB_03876: OHPLBJKB_03876 - Epoxyqueuosine reductase, at 4,067,197 to 4,068,336
_03876
OHPLBJKB_03877: OHPLBJKB_03877 - tRNA-Gly, at 4,068,601 to 4,068,676
_03877
OHPLBJKB_03878: OHPLBJKB_03878 - tRNA-Gly, at 4,068,712 to 4,068,787
_03878
OHPLBJKB_03879: OHPLBJKB_03879 - tRNA-Gly, at 4,068,824 to 4,068,899
_03879
OHPLBJKB_03880: OHPLBJKB_03880 - Oligoribonuclease, at 4,069,110 to 4,069,655
_03880
Position (kb)
4067
4068
4069 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4066.256 kb on + strand, within OHPLBJKB_03875 at 4066.425 kb on + strand, within OHPLBJKB_03875 at 4066.449 kb on - strand, within OHPLBJKB_03875 at 4066.538 kb on + strand, within OHPLBJKB_03875 at 4066.620 kb on - strand, within OHPLBJKB_03875 at 4066.727 kb on + strand, within OHPLBJKB_03875 at 4066.728 kb on - strand, within OHPLBJKB_03875 at 4066.728 kb on - strand, within OHPLBJKB_03875 at 4066.809 kb on + strand, within OHPLBJKB_03875 at 4066.810 kb on - strand, within OHPLBJKB_03875 at 4066.830 kb on - strand, within OHPLBJKB_03875 at 4066.830 kb on - strand, within OHPLBJKB_03875 at 4066.830 kb on - strand, within OHPLBJKB_03875 at 4066.860 kb on + strand, within OHPLBJKB_03875 at 4066.969 kb on + strand, within OHPLBJKB_03875 at 4066.988 kb on + strand, within OHPLBJKB_03875 at 4067.083 kb on + strand at 4067.083 kb on + strand at 4067.090 kb on + strand at 4067.162 kb on + strand at 4067.162 kb on + strand at 4067.162 kb on + strand at 4067.163 kb on - strand at 4067.166 kb on + strand at 4067.166 kb on + strand at 4067.167 kb on - strand at 4067.167 kb on - strand at 4067.186 kb on + strand at 4067.186 kb on + strand at 4067.186 kb on + strand at 4067.186 kb on + strand at 4067.186 kb on + strand at 4067.187 kb on - strand at 4067.187 kb on - strand at 4067.187 kb on - strand at 4067.187 kb on - strand at 4067.187 kb on - strand at 4067.187 kb on - strand at 4067.273 kb on + strand at 4067.274 kb on - strand at 4067.277 kb on + strand at 4067.277 kb on + strand at 4067.277 kb on + strand at 4067.277 kb on + strand at 4067.278 kb on - strand at 4067.278 kb on - strand at 4067.278 kb on - strand at 4067.278 kb on - strand at 4067.338 kb on + strand, within OHPLBJKB_03876 at 4067.374 kb on - strand, within OHPLBJKB_03876 at 4067.399 kb on + strand, within OHPLBJKB_03876 at 4067.440 kb on + strand, within OHPLBJKB_03876 at 4067.440 kb on + strand, within OHPLBJKB_03876 at 4067.441 kb on - strand, within OHPLBJKB_03876 at 4067.441 kb on - strand, within OHPLBJKB_03876 at 4067.499 kb on + strand, within OHPLBJKB_03876 at 4067.670 kb on + strand, within OHPLBJKB_03876 at 4067.670 kb on + strand, within OHPLBJKB_03876 at 4067.670 kb on + strand, within OHPLBJKB_03876 at 4067.671 kb on - strand, within OHPLBJKB_03876 at 4067.682 kb on + strand, within OHPLBJKB_03876 at 4067.682 kb on + strand, within OHPLBJKB_03876 at 4067.683 kb on - strand, within OHPLBJKB_03876 at 4067.830 kb on + strand, within OHPLBJKB_03876 at 4067.830 kb on + strand, within OHPLBJKB_03876 at 4067.830 kb on + strand, within OHPLBJKB_03876 at 4067.832 kb on + strand, within OHPLBJKB_03876 at 4067.832 kb on + strand, within OHPLBJKB_03876 at 4067.832 kb on + strand, within OHPLBJKB_03876 at 4067.833 kb on - strand, within OHPLBJKB_03876 at 4067.833 kb on - strand, within OHPLBJKB_03876 at 4067.833 kb on - strand, within OHPLBJKB_03876 at 4067.853 kb on + strand, within OHPLBJKB_03876 at 4067.853 kb on + strand, within OHPLBJKB_03876 at 4067.854 kb on - strand, within OHPLBJKB_03876 at 4067.861 kb on - strand, within OHPLBJKB_03876 at 4067.861 kb on - strand, within OHPLBJKB_03876 at 4067.922 kb on + strand, within OHPLBJKB_03876 at 4067.926 kb on + strand, within OHPLBJKB_03876 at 4067.949 kb on + strand, within OHPLBJKB_03876 at 4068.097 kb on - strand, within OHPLBJKB_03876 at 4068.120 kb on + strand, within OHPLBJKB_03876 at 4068.218 kb on + strand, within OHPLBJKB_03876 at 4068.218 kb on + strand, within OHPLBJKB_03876 at 4068.219 kb on - strand, within OHPLBJKB_03876 at 4068.219 kb on - strand, within OHPLBJKB_03876 at 4068.219 kb on - strand, within OHPLBJKB_03876 at 4068.219 kb on - strand, within OHPLBJKB_03876 at 4068.219 kb on - strand, within OHPLBJKB_03876 at 4068.242 kb on + strand at 4068.243 kb on - strand at 4068.263 kb on + strand at 4068.449 kb on + strand at 4068.528 kb on + strand at 4068.585 kb on + strand at 4068.668 kb on + strand, within OHPLBJKB_03877 at 4068.902 kb on - strand at 4068.905 kb on - strand at 4068.905 kb on - strand at 4068.905 kb on - strand at 4068.905 kb on - strand at 4069.092 kb on - strand at 4069.092 kb on - strand at 4069.122 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 4,066,256 + OHPLBJKB_03875 0.39 -0.7 4,066,425 + OHPLBJKB_03875 0.50 -0.6 4,066,449 - OHPLBJKB_03875 0.52 +0.0 4,066,538 + OHPLBJKB_03875 0.58 +0.6 4,066,620 - OHPLBJKB_03875 0.63 +0.2 4,066,727 + OHPLBJKB_03875 0.70 +0.1 4,066,728 - OHPLBJKB_03875 0.70 +0.7 4,066,728 - OHPLBJKB_03875 0.70 -0.9 4,066,809 + OHPLBJKB_03875 0.76 -0.9 4,066,810 - OHPLBJKB_03875 0.76 +1.6 4,066,830 - OHPLBJKB_03875 0.77 +0.9 4,066,830 - OHPLBJKB_03875 0.77 +0.7 4,066,830 - OHPLBJKB_03875 0.77 +1.5 4,066,860 + OHPLBJKB_03875 0.79 +0.4 4,066,969 + OHPLBJKB_03875 0.86 -0.5 4,066,988 + OHPLBJKB_03875 0.87 -1.4 4,067,083 + -0.2 4,067,083 + -0.2 4,067,090 + -0.7 4,067,162 + +1.3 4,067,162 + -1.1 4,067,162 + +0.0 4,067,163 - +1.4 4,067,166 + -0.7 4,067,166 + -0.5 4,067,167 - -0.7 4,067,167 - -0.4 4,067,186 + -0.3 4,067,186 + +0.5 4,067,186 + +0.2 4,067,186 + +0.4 4,067,186 + -0.2 4,067,187 - -0.1 4,067,187 - -1.1 4,067,187 - -0.5 4,067,187 - -1.1 4,067,187 - +1.7 4,067,187 - -0.1 4,067,273 + -0.2 4,067,274 - -0.2 4,067,277 + -1.6 4,067,277 + -0.8 4,067,277 + +0.3 4,067,277 + -0.2 4,067,278 - +0.8 4,067,278 - -0.1 4,067,278 - -0.2 4,067,278 - +0.2 4,067,338 + OHPLBJKB_03876 0.12 -1.5 4,067,374 - OHPLBJKB_03876 0.16 +0.0 4,067,399 + OHPLBJKB_03876 0.18 +0.8 4,067,440 + OHPLBJKB_03876 0.21 +0.7 4,067,440 + OHPLBJKB_03876 0.21 +0.5 4,067,441 - OHPLBJKB_03876 0.21 +0.6 4,067,441 - OHPLBJKB_03876 0.21 +0.5 4,067,499 + OHPLBJKB_03876 0.26 -0.7 4,067,670 + OHPLBJKB_03876 0.41 +1.3 4,067,670 + OHPLBJKB_03876 0.41 -0.9 4,067,670 + OHPLBJKB_03876 0.41 +0.9 4,067,671 - OHPLBJKB_03876 0.42 -0.4 4,067,682 + OHPLBJKB_03876 0.43 +3.4 4,067,682 + OHPLBJKB_03876 0.43 -0.9 4,067,683 - OHPLBJKB_03876 0.43 +0.0 4,067,830 + OHPLBJKB_03876 0.56 +1.3 4,067,830 + OHPLBJKB_03876 0.56 +1.3 4,067,830 + OHPLBJKB_03876 0.56 -0.6 4,067,832 + OHPLBJKB_03876 0.56 -0.7 4,067,832 + OHPLBJKB_03876 0.56 +0.5 4,067,832 + OHPLBJKB_03876 0.56 +1.2 4,067,833 - OHPLBJKB_03876 0.56 -0.4 4,067,833 - OHPLBJKB_03876 0.56 +1.2 4,067,833 - OHPLBJKB_03876 0.56 -1.3 4,067,853 + OHPLBJKB_03876 0.58 -0.1 4,067,853 + OHPLBJKB_03876 0.58 +0.1 4,067,854 - OHPLBJKB_03876 0.58 +1.3 4,067,861 - OHPLBJKB_03876 0.58 -0.3 4,067,861 - OHPLBJKB_03876 0.58 -0.2 4,067,922 + OHPLBJKB_03876 0.64 -0.3 4,067,926 + OHPLBJKB_03876 0.64 +0.7 4,067,949 + OHPLBJKB_03876 0.66 +0.7 4,068,097 - OHPLBJKB_03876 0.79 -0.1 4,068,120 + OHPLBJKB_03876 0.81 +0.4 4,068,218 + OHPLBJKB_03876 0.90 -0.4 4,068,218 + OHPLBJKB_03876 0.90 -1.6 4,068,219 - OHPLBJKB_03876 0.90 -2.5 4,068,219 - OHPLBJKB_03876 0.90 +0.4 4,068,219 - OHPLBJKB_03876 0.90 -0.7 4,068,219 - OHPLBJKB_03876 0.90 -0.1 4,068,219 - OHPLBJKB_03876 0.90 -0.0 4,068,242 + -0.1 4,068,243 - +1.5 4,068,263 + +0.6 4,068,449 + +0.2 4,068,528 + +1.3 4,068,585 + -0.1 4,068,668 + OHPLBJKB_03877 0.88 +0.3 4,068,902 - -1.8 4,068,905 - +0.2 4,068,905 - -1.1 4,068,905 - -0.5 4,068,905 - -0.4 4,069,092 - +0.0 4,069,092 - +0.4 4,069,122 - +0.1
Or see this region's nucleotide sequence