Strain Fitness in Escherichia coli ECRC100 around OKFHMN_27825

Experiment: EV146

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntdnaQ and OKFHMN_27825 are separated by 92 nucleotidesOKFHMN_27825 and dicB overlap by 4 nucleotidesdicB and OKFHMN_27840 are separated by 400 nucleotidesOKFHMN_27840 and OKFHMN_27845 are separated by 3 nucleotides OKFHMN_27820: dnaQ - exonuclease, at 5,356,584 to 5,359,055 dnaQ OKFHMN_27825: OKFHMN_27825 - DUF1482 domain-containing protein, at 5,359,148 to 5,359,339 _27825 OKFHMN_27830: dicB - Division inhibition protein DicB, at 5,359,336 to 5,359,524 dicB OKFHMN_27840: OKFHMN_27840 - hypothetical protein, at 5,359,925 to 5,360,089 _27840 OKFHMN_27845: OKFHMN_27845 - Uncharacterized protein YdfC, at 5,360,093 to 5,360,311 _27845 Position (kb) 5359 5360Strain fitness (log2 ratio) -1 0 1 2at 5358.819 kb on - strandat 5358.821 kb on - strandat 5358.821 kb on - strandat 5360.074 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction EV146
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5,358,819 - +2.3
5,358,821 - +2.7
5,358,821 - +0.1
5,360,074 + +0.8

Or see this region's nucleotide sequence