Strain Fitness in Escherichia coli ECRC100 around OKFHMN_26990

Experiment: EV146

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EV146
5,194,114	+	chbG	OKFHMN_26985	0.45	-0.2
5,194,160	+	chbG	OKFHMN_26985	0.51	-0.3
5,194,160	+	chbG	OKFHMN_26985	0.51	+1.7
5,194,535	-				-0.3
5,194,543	-				+0.5
5,194,603	-				-0.6
5,194,793	+				+1.7
5,194,794	-				+1.4
5,195,274	+	katE	OKFHMN_26990	0.31	+0.7
5,195,598	-	katE	OKFHMN_26990	0.45	+0.4
5,196,259	-	katE	OKFHMN_26990	0.74	-0.9
5,196,271	-	katE	OKFHMN_26990	0.75	+2.7
5,196,273	-	katE	OKFHMN_26990	0.75	-0.1
5,196,349	-	katE	OKFHMN_26990	0.78	+0.7
5,196,419	+	katE	OKFHMN_26990	0.81	+0.0
5,196,431	+	katE	OKFHMN_26990	0.82	-0.3
5,196,517	-	katE	OKFHMN_26990	0.86	-0.6
5,196,594	+	katE	OKFHMN_26990	0.89	+1.7
5,196,856	-				-1.6
5,196,904	-				+0.6
5,196,904	-				-1.1
5,196,960	+				-0.3
5,196,979	-				-0.0
5,197,079	+	cedA	OKFHMN_26995	0.21	+0.7
5,197,086	+	cedA	OKFHMN_26995	0.24	-0.3
5,197,291	+				-1.0