Experiment: EV146
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKFHMN_23725 and Ile2_trna are separated by 441 nucleotides Ile2_trna and Arg_trna are separated by 9 nucleotides Arg_trna and Arg_trna are separated by 13 nucleotides Arg_trna and OKFHMN_23755 are separated by 511 nucleotides
OKFHMN_23725: OKFHMN_23725 - antitermination protein, at 4,632,997 to 4,633,431
_23725
OKFHMN_23730: Ile2_trna - tRNA-Ile2(cat), at 4,633,873 to 4,633,948
_trna
OKFHMN_23735: Arg_trna - tRNA-Arg(tcg), at 4,633,958 to 4,634,034
_trna
OKFHMN_23740: Arg_trna - tRNA-Arg(tct), at 4,634,048 to 4,634,124
_trna
OKFHMN_23755: OKFHMN_23755 - sialate O-acetylesterase, at 4,634,636 to 4,636,582
_23755
Position (kb)
4633
4634
4635 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4632.990 kb on + strand at 4633.164 kb on + strand, within OKFHMN_23725 at 4633.165 kb on - strand, within OKFHMN_23725 at 4633.165 kb on - strand, within OKFHMN_23725 at 4633.219 kb on + strand, within OKFHMN_23725 at 4633.220 kb on - strand, within OKFHMN_23725 at 4633.278 kb on + strand, within OKFHMN_23725 at 4633.278 kb on + strand, within OKFHMN_23725 at 4633.280 kb on + strand, within OKFHMN_23725 at 4633.285 kb on - strand, within OKFHMN_23725 at 4633.398 kb on - strand at 4633.441 kb on + strand at 4633.460 kb on - strand at 4633.476 kb on + strand at 4633.523 kb on - strand at 4633.562 kb on - strand at 4633.609 kb on + strand at 4633.718 kb on + strand at 4633.719 kb on - strand at 4633.813 kb on + strand at 4633.814 kb on - strand at 4633.833 kb on + strand at 4633.952 kb on + strand at 4633.953 kb on - strand at 4633.953 kb on - strand at 4633.962 kb on + strand at 4634.135 kb on - strand at 4634.197 kb on + strand at 4634.197 kb on + strand at 4634.251 kb on + strand at 4634.847 kb on + strand, within OKFHMN_23755 at 4634.882 kb on - strand, within OKFHMN_23755
Per-strain Table
Position Strand Gene LocusTag Fraction EV146 remove 4,632,990 + +0.2 4,633,164 + OKFHMN_23725 0.38 -3.4 4,633,165 - OKFHMN_23725 0.39 -0.3 4,633,165 - OKFHMN_23725 0.39 +0.2 4,633,219 + OKFHMN_23725 0.51 -0.0 4,633,220 - OKFHMN_23725 0.51 -0.3 4,633,278 + OKFHMN_23725 0.65 +0.0 4,633,278 + OKFHMN_23725 0.65 +1.7 4,633,280 + OKFHMN_23725 0.65 -0.7 4,633,285 - OKFHMN_23725 0.66 -1.1 4,633,398 - +1.7 4,633,441 + +1.3 4,633,460 - -0.0 4,633,476 + +0.3 4,633,523 - -0.6 4,633,562 - +0.4 4,633,609 + -0.8 4,633,718 + +0.3 4,633,719 - -0.3 4,633,813 + -0.3 4,633,814 - +0.1 4,633,833 + -2.0 4,633,952 + -0.4 4,633,953 - -0.0 4,633,953 - +0.1 4,633,962 + -2.7 4,634,135 - +0.8 4,634,197 + -0.3 4,634,197 + -0.1 4,634,251 + -0.3 4,634,847 + OKFHMN_23755 0.11 +0.9 4,634,882 - OKFHMN_23755 0.13 -0.0
Or see this region's nucleotide sequence