Experiment: EV146
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt proX and proW are separated by 56 nucleotides proW and proV overlap by 8 nucleotides
OKFHMN_20810: proX - glycine betaine/L-proline ABC transporter substrate-binding protein ProX, at 4,044,324 to 4,045,316
proX
OKFHMN_20815: proW - glycine betaine/L-proline ABC transporter permease ProW, at 4,045,373 to 4,046,437
proW
OKFHMN_20820: proV - glycine betaine/L-proline ABC transporter ATP-binding protein ProV, at 4,046,430 to 4,047,632
proV
Position (kb)
4045
4046
4047 Strain fitness (log2 ratio)
-1
0
1
2 at 4044.441 kb on - strand, within proX at 4044.441 kb on - strand, within proX at 4044.461 kb on + strand, within proX at 4044.461 kb on + strand, within proX at 4044.461 kb on + strand, within proX at 4044.461 kb on + strand, within proX at 4044.462 kb on - strand, within proX at 4044.530 kb on + strand, within proX at 4044.543 kb on - strand, within proX at 4044.672 kb on - strand, within proX at 4044.698 kb on - strand, within proX at 4044.724 kb on + strand, within proX at 4044.725 kb on - strand, within proX at 4044.758 kb on - strand, within proX at 4044.771 kb on - strand, within proX at 4044.782 kb on + strand, within proX at 4044.845 kb on + strand, within proX at 4044.845 kb on + strand, within proX at 4044.846 kb on - strand, within proX at 4044.856 kb on - strand, within proX at 4044.967 kb on + strand, within proX at 4044.968 kb on - strand, within proX at 4045.036 kb on + strand, within proX at 4045.037 kb on - strand, within proX at 4045.037 kb on - strand, within proX at 4045.137 kb on - strand, within proX at 4045.145 kb on + strand, within proX at 4045.146 kb on - strand, within proX at 4045.146 kb on - strand, within proX at 4045.146 kb on - strand, within proX at 4045.147 kb on + strand, within proX at 4045.148 kb on - strand, within proX at 4045.153 kb on - strand, within proX at 4045.229 kb on + strand at 4045.229 kb on + strand at 4045.274 kb on + strand at 4045.275 kb on - strand at 4045.308 kb on - strand at 4045.320 kb on + strand at 4045.343 kb on + strand at 4045.420 kb on - strand at 4045.606 kb on + strand, within proW at 4045.634 kb on - strand, within proW at 4045.833 kb on - strand, within proW at 4045.833 kb on - strand, within proW at 4045.833 kb on - strand, within proW at 4045.833 kb on - strand, within proW at 4045.855 kb on - strand, within proW at 4045.997 kb on - strand, within proW at 4046.129 kb on - strand, within proW at 4046.162 kb on - strand, within proW at 4046.458 kb on - strand at 4046.497 kb on + strand at 4046.498 kb on - strand at 4046.498 kb on - strand at 4046.498 kb on - strand at 4046.498 kb on - strand at 4046.646 kb on - strand, within proV at 4046.682 kb on - strand, within proV at 4046.855 kb on - strand, within proV at 4046.943 kb on - strand, within proV at 4047.283 kb on - strand, within proV at 4047.421 kb on - strand, within proV
Per-strain Table
Position Strand Gene LocusTag Fraction EV146 remove 4,044,441 - proX OKFHMN_20810 0.12 +0.7 4,044,441 - proX OKFHMN_20810 0.12 -0.1 4,044,461 + proX OKFHMN_20810 0.14 +0.9 4,044,461 + proX OKFHMN_20810 0.14 +1.4 4,044,461 + proX OKFHMN_20810 0.14 +0.2 4,044,461 + proX OKFHMN_20810 0.14 +1.0 4,044,462 - proX OKFHMN_20810 0.14 +0.6 4,044,530 + proX OKFHMN_20810 0.21 +0.6 4,044,543 - proX OKFHMN_20810 0.22 -0.1 4,044,672 - proX OKFHMN_20810 0.35 +0.8 4,044,698 - proX OKFHMN_20810 0.38 +1.6 4,044,724 + proX OKFHMN_20810 0.40 +1.2 4,044,725 - proX OKFHMN_20810 0.40 +0.6 4,044,758 - proX OKFHMN_20810 0.44 +1.0 4,044,771 - proX OKFHMN_20810 0.45 +0.9 4,044,782 + proX OKFHMN_20810 0.46 +2.5 4,044,845 + proX OKFHMN_20810 0.52 +0.8 4,044,845 + proX OKFHMN_20810 0.52 -1.6 4,044,846 - proX OKFHMN_20810 0.53 +1.5 4,044,856 - proX OKFHMN_20810 0.54 +1.0 4,044,967 + proX OKFHMN_20810 0.65 +0.5 4,044,968 - proX OKFHMN_20810 0.65 +1.9 4,045,036 + proX OKFHMN_20810 0.72 +0.7 4,045,037 - proX OKFHMN_20810 0.72 +0.4 4,045,037 - proX OKFHMN_20810 0.72 +0.9 4,045,137 - proX OKFHMN_20810 0.82 +0.2 4,045,145 + proX OKFHMN_20810 0.83 +0.7 4,045,146 - proX OKFHMN_20810 0.83 +0.3 4,045,146 - proX OKFHMN_20810 0.83 -0.5 4,045,146 - proX OKFHMN_20810 0.83 +0.4 4,045,147 + proX OKFHMN_20810 0.83 +0.2 4,045,148 - proX OKFHMN_20810 0.83 +1.9 4,045,153 - proX OKFHMN_20810 0.83 +0.7 4,045,229 + +2.2 4,045,229 + +0.1 4,045,274 + -0.9 4,045,275 - +0.0 4,045,308 - +0.7 4,045,320 + +0.2 4,045,343 + +1.3 4,045,420 - +1.0 4,045,606 + proW OKFHMN_20815 0.22 +0.9 4,045,634 - proW OKFHMN_20815 0.25 -0.3 4,045,833 - proW OKFHMN_20815 0.43 +0.9 4,045,833 - proW OKFHMN_20815 0.43 +0.8 4,045,833 - proW OKFHMN_20815 0.43 +0.1 4,045,833 - proW OKFHMN_20815 0.43 +0.9 4,045,855 - proW OKFHMN_20815 0.45 +0.4 4,045,997 - proW OKFHMN_20815 0.59 +1.0 4,046,129 - proW OKFHMN_20815 0.71 +0.8 4,046,162 - proW OKFHMN_20815 0.74 +0.5 4,046,458 - +0.7 4,046,497 + -0.3 4,046,498 - +0.7 4,046,498 - +1.9 4,046,498 - +2.3 4,046,498 - +1.0 4,046,646 - proV OKFHMN_20820 0.18 +1.1 4,046,682 - proV OKFHMN_20820 0.21 +0.6 4,046,855 - proV OKFHMN_20820 0.35 +1.9 4,046,943 - proV OKFHMN_20820 0.43 +0.7 4,047,283 - proV OKFHMN_20820 0.71 +0.8 4,047,421 - proV OKFHMN_20820 0.82 +0.6
Or see this region's nucleotide sequence