Experiment: EV146
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKFHMN_16455 and yhiJ are separated by 261 nucleotides yhiJ and yhiI are separated by 365 nucleotides
OKFHMN_16455: OKFHMN_16455 - DUF4049 domain-containing protein, at 3,206,145 to 3,207,755
_16455
OKFHMN_16460: yhiJ - Uncharacterized protein YhiJ, at 3,208,017 to 3,209,639
yhiJ
OKFHMN_16465: yhiI - Uncharacterized protein YhiI, at 3,210,005 to 3,211,072
yhiI
Position (kb)
3208
3209
3210 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3207.551 kb on + strand, within OKFHMN_16455 at 3207.603 kb on - strand at 3207.834 kb on + strand at 3207.835 kb on - strand at 3208.136 kb on + strand at 3208.148 kb on + strand at 3208.148 kb on + strand at 3208.150 kb on + strand at 3208.417 kb on + strand, within yhiJ at 3208.428 kb on - strand, within yhiJ at 3208.507 kb on - strand, within yhiJ at 3208.615 kb on - strand, within yhiJ at 3208.726 kb on + strand, within yhiJ at 3208.727 kb on - strand, within yhiJ at 3208.791 kb on - strand, within yhiJ at 3208.806 kb on - strand, within yhiJ at 3208.963 kb on + strand, within yhiJ at 3208.980 kb on - strand, within yhiJ at 3209.030 kb on + strand, within yhiJ at 3209.178 kb on - strand, within yhiJ at 3209.247 kb on - strand, within yhiJ at 3209.393 kb on - strand, within yhiJ at 3209.398 kb on + strand, within yhiJ at 3209.492 kb on + strand at 3209.492 kb on + strand at 3209.492 kb on + strand at 3209.516 kb on + strand at 3209.529 kb on - strand at 3209.529 kb on - strand at 3209.551 kb on + strand at 3209.629 kb on + strand at 3209.629 kb on + strand at 3209.630 kb on - strand at 3209.644 kb on + strand at 3209.657 kb on + strand at 3209.660 kb on + strand at 3209.661 kb on - strand at 3209.667 kb on - strand at 3209.667 kb on - strand at 3209.669 kb on + strand at 3209.699 kb on + strand at 3209.700 kb on - strand at 3209.791 kb on + strand at 3209.791 kb on + strand at 3209.792 kb on - strand at 3209.797 kb on + strand at 3209.797 kb on + strand at 3209.798 kb on - strand at 3209.812 kb on + strand at 3209.842 kb on + strand at 3209.842 kb on + strand at 3209.842 kb on + strand at 3209.842 kb on + strand at 3209.842 kb on + strand at 3209.843 kb on - strand at 3209.991 kb on - strand at 3210.004 kb on + strand at 3210.011 kb on - strand at 3210.016 kb on + strand at 3210.016 kb on + strand at 3210.242 kb on - strand, within yhiI at 3210.371 kb on - strand, within yhiI at 3210.413 kb on - strand, within yhiI at 3210.445 kb on + strand, within yhiI at 3210.445 kb on + strand, within yhiI at 3210.535 kb on + strand, within yhiI at 3210.544 kb on + strand, within yhiI at 3210.546 kb on + strand, within yhiI at 3210.547 kb on - strand, within yhiI at 3210.547 kb on - strand, within yhiI at 3210.565 kb on + strand, within yhiI at 3210.565 kb on + strand, within yhiI
Per-strain Table
Position Strand Gene LocusTag Fraction EV146 remove 3,207,551 + OKFHMN_16455 0.87 -0.1 3,207,603 - -1.5 3,207,834 + +0.8 3,207,835 - -2.2 3,208,136 + -0.8 3,208,148 + +1.1 3,208,148 + -0.2 3,208,150 + -0.4 3,208,417 + yhiJ OKFHMN_16460 0.25 +0.1 3,208,428 - yhiJ OKFHMN_16460 0.25 +1.2 3,208,507 - yhiJ OKFHMN_16460 0.30 -1.1 3,208,615 - yhiJ OKFHMN_16460 0.37 -1.1 3,208,726 + yhiJ OKFHMN_16460 0.44 +0.1 3,208,727 - yhiJ OKFHMN_16460 0.44 -0.1 3,208,791 - yhiJ OKFHMN_16460 0.48 +1.1 3,208,806 - yhiJ OKFHMN_16460 0.49 +2.1 3,208,963 + yhiJ OKFHMN_16460 0.58 +2.7 3,208,980 - yhiJ OKFHMN_16460 0.59 +0.7 3,209,030 + yhiJ OKFHMN_16460 0.62 +0.6 3,209,178 - yhiJ OKFHMN_16460 0.72 +0.7 3,209,247 - yhiJ OKFHMN_16460 0.76 +0.1 3,209,393 - yhiJ OKFHMN_16460 0.85 +2.1 3,209,398 + yhiJ OKFHMN_16460 0.85 -0.6 3,209,492 + +0.8 3,209,492 + -1.0 3,209,492 + -0.5 3,209,516 + +0.1 3,209,529 - -1.7 3,209,529 - +0.4 3,209,551 + +0.1 3,209,629 + -1.1 3,209,629 + +0.1 3,209,630 - -0.1 3,209,644 + -0.2 3,209,657 + -0.3 3,209,660 + +0.8 3,209,661 - +0.7 3,209,667 - +0.4 3,209,667 - +0.3 3,209,669 + +0.3 3,209,699 + +0.5 3,209,700 - +0.5 3,209,791 + +1.1 3,209,791 + -0.2 3,209,792 - -0.4 3,209,797 + +0.3 3,209,797 + +0.3 3,209,798 - -0.7 3,209,812 + +0.9 3,209,842 + -0.5 3,209,842 + +0.2 3,209,842 + +0.4 3,209,842 + -0.3 3,209,842 + -0.4 3,209,843 - +0.1 3,209,991 - -0.2 3,210,004 + -0.4 3,210,011 - +0.0 3,210,016 + +0.3 3,210,016 + -0.8 3,210,242 - yhiI OKFHMN_16465 0.22 -0.2 3,210,371 - yhiI OKFHMN_16465 0.34 -0.1 3,210,413 - yhiI OKFHMN_16465 0.38 +1.1 3,210,445 + yhiI OKFHMN_16465 0.41 -0.3 3,210,445 + yhiI OKFHMN_16465 0.41 -1.2 3,210,535 + yhiI OKFHMN_16465 0.50 -0.2 3,210,544 + yhiI OKFHMN_16465 0.50 -0.4 3,210,546 + yhiI OKFHMN_16465 0.51 -0.3 3,210,547 - yhiI OKFHMN_16465 0.51 +0.7 3,210,547 - yhiI OKFHMN_16465 0.51 -1.1 3,210,565 + yhiI OKFHMN_16465 0.52 -0.8 3,210,565 + yhiI OKFHMN_16465 0.52 +1.2
Or see this region's nucleotide sequence